Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 0.0e+00 1132.1 606 100.0
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 1.6e-245 852.8 627 78.0
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 1.5e-232 809.7 630 71.9
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 1.2e-229 800.0 634 70.5
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 3.3e-227 792.0 658 68.8
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 1.1e-222 776.9 624 71.8
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 3.0e-220 768.8 653 66.5
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 7.4e-219 764.2 636 68.4
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 6.1e-213 744.6 657 64.5
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 1.0e-212 743.8 650 66.3
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 6.3e-210 734.6 657 63.5
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 1.1e-209 733.8 657 63.9
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 1.4e-209 733.4 660 62.9
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 1.8e-209 733.0 662 64.7
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 4.1e-209 731.9 661 62.8
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 7.0e-209 731.1 661 63.1
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 2.0e-208 729.6 658 63.2
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 4.5e-208 728.4 655 63.2
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 1.0e-207 727.2 656 62.2
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 1.3e-207 726.9 658 62.9
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 8.5e-207 724.2 660 63.0
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 1.5e-206 723.4 662 62.8
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 4.2e-206 721.8 650 64.8
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 7.2e-206 721.1 665 62.3
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 3.6e-205 718.8 661 62.6
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 8.0e-205 717.6 659 62.5
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 8.0e-205 717.6 663 61.1
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.4e-204 716.8 659 62.8
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 2.3e-204 716.1 661 62.9
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 4.0e-204 715.3 667 63.9
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 4.0e-204 715.3 662 62.5
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 8.8e-204 714.1 662 62.4
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 2.6e-203 712.6 653 63.6
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 4.4e-203 711.8 662 63.9
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 5.7e-203 711.4 661 61.9
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 7.4e-203 711.1 665 62.3
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 3.1e-201 705.7 652 65.5
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 3.1e-201 705.7 657 62.3
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 3.1e-201 705.7 653 63.1
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 4.1e-201 705.3 592 67.4
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 9.1e-201 704.1 637 65.6
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 1.6e-200 703.4 648 62.2
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 2.0e-200 703.0 660 60.6
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 7.7e-200 701.0 654 63.0
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 1.0e-199 700.7 648 63.6
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 1.3e-199 700.3 648 63.4
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 1.7e-199 699.9 655 61.5
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 2.9e-199 699.1 661 60.7
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 8.5e-199 697.6 653 62.2
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 8.5e-199 697.6 654 63.1
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.1e-198 697.2 661 60.5
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 1.9e-198 696.4 657 61.0
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.2e-198 694.5 661 60.4
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 7.2e-198 694.5 667 61.9
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 2.7e-197 692.6 655 61.5
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.6e-197 692.2 662 60.9
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 3.6e-197 692.2 667 63.7
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 6.1e-197 691.4 659 62.5
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 6.1e-197 691.4 659 62.5
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 1.0e-196 690.6 658 59.6
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 8.8e-196 687.6 667 63.4
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 3.4e-195 685.6 657 61.9
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 4.8e-194 681.8 661 59.6
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.4e-193 679.5 661 59.6
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 4.1e-193 678.7 662 61.6
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 7.0e-193 677.9 659 60.5
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 2.0e-192 676.4 649 59.9
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 8.5e-191 671.0 661 59.8
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 2.3e-188 662.9 650 59.4
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 2.0e-187 659.8 649 58.4
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 3.7e-186 655.6 658 59.3
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 4.9e-186 655.2 664 57.7
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 4.9e-186 655.2 656 61.1
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 8.3e-186 654.4 657 61.8
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 1.1e-185 654.1 650 58.3
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 1.1e-185 654.1 659 59.0
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 5.4e-185 651.7 652 58.1
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 1.2e-184 650.6 658 58.4
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 1.6e-184 650.2 675 59.1
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 2.0e-184 649.8 653 59.6
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 2.7e-184 649.4 660 58.9
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 2.9e-183 646.0 665 59.8
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 6.6e-183 644.8 626 60.9
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 8.6e-183 644.4 645 59.5
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 9.5e-182 641.0 653 57.7
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 1.6e-181 640.2 648 57.9
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.4e-180 637.1 658 59.9
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.8e-180 636.7 644 61.0
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 1.2e-179 634.0 652 57.7
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 1.5e-179 633.6 661 56.3
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.6e-179 632.9 648 59.4
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 7.5e-179 631.3 656 57.8
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 7.5e-179 631.3 656 57.8
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 9.8e-179 630.9 533 67.4
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 2.4e-177 626.3 657 57.5
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 2.7e-176 622.9 643 58.2
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 2.7e-176 622.9 646 57.1
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 4.6e-176 622.1 659 57.4
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 1.1e-174 617.5 661 55.1
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 1.5e-174 617.1 660 55.8
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 1.9e-174 616.7 654 57.6
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 2.5e-174 616.3 663 55.7
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 4.3e-174 615.5 661 55.2
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 5.6e-174 615.1 660 57.9
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 1.2e-173 614.0 637 59.8
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 2.1e-173 613.2 656 55.9
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.8e-173 612.8 661 54.9
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.0e-172 609.0 661 54.8
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.4e-171 605.9 661 54.5
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 2.9e-170 602.8 668 53.6
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 4.9e-170 602.1 659 56.4
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 4.1e-169 599.0 649 57.9
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 3.5e-168 595.9 652 56.7
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 6.0e-168 595.1 647 54.7
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 7.8e-168 594.7 660 54.1
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 8.6e-167 591.3 650 58.3
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.3e-166 589.0 544 61.9
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.3e-166 589.0 544 61.9
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 4.3e-166 589.0 653 56.0
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.3e-166 588.2 616 57.1
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 6.2e-165 585.1 638 55.5
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 1.8e-164 583.6 658 53.8
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 1.3e-162 577.4 641 55.1
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 4.9e-162 575.5 648 54.0
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 4.9e-162 575.5 662 50.9
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 6.0e-160 568.5 661 50.8
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 5.1e-159 565.5 659 53.1
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 6.6e-159 565.1 652 55.1
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 1.9e-158 563.5 654 53.5
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 2.1e-157 560.1 654 53.2
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 2.6e-155 553.1 669 50.7
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.1e-153 547.7 634 53.8
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.3e-151 540.8 652 51.1
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 1.1e-150 537.7 672 49.9
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 1.1e-148 531.2 664 49.7
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 2.4e-148 530.0 652 51.2
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 6.8e-148 528.5 665 49.5
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.8e-146 522.7 689 47.6
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 1.2e-144 517.7 629 49.0
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 1.2e-144 517.7 656 49.1
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 1.1e-142 511.1 623 54.7
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 1.5e-142 510.8 616 51.8
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 3.3e-142 509.6 660 48.0
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 2.8e-141 506.5 642 51.6
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 1.4e-137 494.2 653 47.5
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 3.3e-134 483.0 657 46.7
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 3.6e-133 479.6 507 57.0
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 6.0e-120 435.6 650 45.1
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 7.4e-118 428.7 602 46.5
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 1.6e-117 427.6 590 45.6
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 5.1e-111 406.0 601 50.6
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 1.9e-110 404.1 401 58.6
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 2.9e-106 390.2 398 56.3
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 1.2e-99 368.2 420 54.8
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 1.9e-97 360.9 401 53.4
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 4.1e-92 343.2 645 39.8
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 5.3e-92 342.8 638 39.5
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 2.8e-85 320.5 541 40.1
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.2e-83 315.1 407 47.9
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 1.5e-81 308.1 209 78.5
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 1.8e-79 301.2 307 58.6
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 2.0e-75 287.7 266 59.0
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 1.8e-63 248.1 634 33.0
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 5.8e-54 216.5 268 46.6
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 7.3e-33 146.4 119 58.0
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 3.4e-30 137.5 77 87.0
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 3.4e-30 137.5 221 51.6
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 1.2e-27 129.0 141 56.7
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 6.6e-26 123.2 81 75.3
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 6.6e-26 123.2 371 27.8
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.5e-25 122.1 109 54.1
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 3.1e-23 114.4 125 52.8
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 8.4e-21 106.3 61 78.7
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 5.4e-20 103.6 74 68.9
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.2e-19 102.4 78 70.5
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 2.1e-19 101.7 386 26.2
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 5.5e-12 77.0 60 63.3
Nitab4.5_0000556g0130 Nicotiana tabacum HOM05D002396 ORTHO05D002779 5.5e-12 77.0 86 58.1
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 2.5e-09 68.2 385 23.6
Lj8E171T0 Lonicera japonica HOM05D003743 ORTHO05D004311 2.1e-08 65.1 83 51.8
SEGI_28495 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 1.1e-07 62.8 64 59.4
Cfa025708 Carpinus fangiana HOM05D003743 ORTHO05D004311 1.4e-07 62.4 531 21.1


User provided reference genes

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