Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050775.1 Olea europaea HOM05D000792 ORTHO05D004195 5.3e-156 554.3 276 100.0
Dinv17744 Davidia involucrata HOM05D000792 ORTHO05D004195 1.6e-128 463.0 272 84.2
MBI18_g25810_MAGBIO Magnolia biondii HOM05D000792 ORTHO05D004195 1.1e-121 440.3 274 80.7
vmacro19671 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 1.1e-121 440.3 272 79.0
FAN05G0287 Fragaria x ananassa HOM05D000792 ORTHO05D004195 2.8e-120 435.6 273 78.8
Sabra13G0033000 Salix brachista HOM05D000792 ORTHO05D004195 6.8e-119 431.0 273 78.4
SGA_v2.0_scaffold15G07272 Striga asiatica HOM05D000792 ORTHO05D004195 7.5e-118 427.6 256 81.6
FAN14G0951 Fragaria x ananassa HOM05D000792 ORTHO05D004195 2.2e-117 426.0 268 78.4
Oeu004838.1 Olea europaea HOM05D000792 ORTHO05D004195 2.7e-115 419.1 225 92.4
Hma1.2p1_0083F.1_g042650 Hydrangea macrophylla HOM05D000792 ORTHO05D004195 4.5e-115 418.3 257 81.3
Lj9A672G81 Lonicera japonica HOM05D000792 ORTHO05D004195 5.9e-115 417.9 256 81.2
Manes.09G158100 Manihot esculenta HOM05D000792 ORTHO05D004195 1.0e-114 417.2 257 81.7
Dinv03363 Davidia involucrata HOM05D000792 ORTHO05D004195 1.3e-114 416.8 256 81.2
Haze_04306 Corylus avellana HOM05D000792 ORTHO05D004195 1.7e-114 416.4 257 79.8
Manes.08G126500 Manihot esculenta HOM05D000792 ORTHO05D004195 2.3e-114 416.0 257 81.7
Rhsim05G0148700 Rhododendron simsii HOM05D000792 ORTHO05D004195 3.8e-114 415.2 257 79.4
GSVIVG01021896001 Vitis vinifera HOM05D000792 ORTHO05D004195 5.0e-114 414.8 256 78.9
Cc02_g31260 Coffea canephora HOM05D000792 ORTHO05D004195 6.6e-114 414.5 257 81.3
Actinidia05754 Actinidia chinensis HOM05D000792 ORTHO05D004195 8.6e-114 414.1 259 78.4
Migut.K00761 Erythranthe guttata HOM05D000792 ORTHO05D004195 8.6e-114 414.1 256 78.9
MSTRG.3420 Avicennia marina HOM05D000792 ORTHO05D004195 1.5e-113 413.3 257 79.0
Prupe.6G336900 Prunus persica HOM05D000792 ORTHO05D004195 1.5e-113 413.3 257 79.4
QL03p000120 Quercus lobata HOM05D000792 ORTHO05D004195 2.5e-113 412.5 256 79.3
CSS0015984 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 4.3e-113 411.8 257 79.4
CDE09G0368 Ceratophyllum demersum HOM05D000792 ORTHO05D004195 5.6e-113 411.4 275 73.5
Thecc.05G291700 Theobroma cacao HOM05D000792 ORTHO05D004195 1.2e-112 410.2 256 77.7
TAR365G0075 Trochodendron aralioides HOM05D000792 ORTHO05D004195 1.2e-112 410.2 258 79.8
Ciclev10000367m.g Citrus clementina HOM05D000792 ORTHO05D004195 3.6e-112 408.7 256 79.7
TWI12G0870 Tripterygium wilfordii HOM05D000792 ORTHO05D004195 3.6e-112 408.7 256 78.1
COL.COLO4_13633 Corchorus olitorius HOM05D000792 ORTHO05D004195 6.1e-112 407.9 256 77.3
Potri.013G033800 Populus trichocarpa HOM05D000792 ORTHO05D004195 6.1e-112 407.9 257 79.0
Cpa.g.sc117.38 Carica papaya HOM05D000792 ORTHO05D004195 1.0e-111 407.1 256 78.1
Gohir.A13G171400 Gossypium hirsutum HOM05D000792 ORTHO05D004195 1.0e-111 407.1 257 77.4
Gohir.D13G176800 Gossypium hirsutum HOM05D000792 ORTHO05D004195 1.0e-111 407.1 257 77.4
Gorai.013G202200 Gossypium raimondii HOM05D000792 ORTHO05D004195 1.0e-111 407.1 257 77.4
TAR636G2564 Trochodendron aralioides HOM05D000792 ORTHO05D004195 1.0e-111 407.1 258 79.5
CiPaw.07G009200 Carya illinoinensis HOM05D000792 ORTHO05D004195 1.4e-111 406.8 256 78.9
CSS0027954 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 2.3e-111 406.0 256 77.7
CSS0043695 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 2.3e-111 406.0 256 77.7
Duzib106G0823 Durio zibethinus HOM05D000792 ORTHO05D004195 4.0e-111 405.2 257 76.3
RcHm_v2.0_Chr3g0452571 Rosa chinensis HOM05D000792 ORTHO05D004195 4.0e-111 405.2 256 78.5
Lj5g0000884 Lotus japonicus HOM05D000792 ORTHO05D004195 5.2e-111 404.8 256 77.7
MBI19_g08863_MAGBIO Magnolia biondii HOM05D000792 ORTHO05D004195 6.8e-111 404.4 278 75.5
Oeu003790.1 Olea europaea HOM05D000792 ORTHO05D004195 1.2e-110 403.7 256 80.5
CiPaw.08G177700 Carya illinoinensis HOM05D000792 ORTHO05D004195 2.0e-110 402.9 256 77.7
Nitab4.5_0000245g0030 Nicotiana tabacum HOM05D000792 ORTHO05D004195 2.0e-110 402.9 256 78.9
Nitab4.5_0006443g0030 Nicotiana tabacum HOM05D000792 ORTHO05D004195 2.0e-110 402.9 256 78.9
FvH4_6g03981 Fragaria vesca HOM05D000792 ORTHO05D004195 2.6e-110 402.5 254 78.0
FAN09G2107 Fragaria x ananassa HOM05D000792 ORTHO05D004195 5.8e-110 401.4 254 77.6
CSS0038276 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 7.5e-110 401.0 274 74.5
FAN05G4969 Fragaria x ananassa HOM05D000792 ORTHO05D004195 7.5e-110 401.0 254 78.0
Potri.005G046500 Populus trichocarpa HOM05D000792 ORTHO05D004195 7.5e-110 401.0 257 79.0
Aqoxy2G03096 Aquilegia oxysepala HOM05D000792 ORTHO05D004195 9.8e-110 400.6 260 76.9
Atru.chr2.653 Acer truncatum HOM05D000792 ORTHO05D004195 1.3e-109 400.2 256 75.4
CDE02G3582 Ceratophyllum demersum HOM05D000792 ORTHO05D004195 1.3e-109 400.2 260 76.2
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 1.3e-109 400.2 256 77.3
TWI36G0731 Tripterygium wilfordii HOM05D000792 ORTHO05D004195 1.7e-109 399.8 256 76.2
ClCG02G016330 Citrullus lanatus HOM05D000792 ORTHO05D004195 2.9e-109 399.1 257 78.6
EL10Ac4g09219 Beta vulgaris HOM05D000792 ORTHO05D004195 8.3e-109 397.5 256 76.2
MD04G1217000 Malus domestica HOM05D000792 ORTHO05D004195 1.8e-108 396.4 256 76.6
Sopen08g008890 Solanum pennellii HOM05D000792 ORTHO05D004195 1.8e-108 396.4 256 76.2
Nn3g21306 Nelumbo nucifera HOM05D000792 ORTHO05D004195 2.4e-108 396.0 258 77.1
Sc09g0003670 Simmondsia chinensis HOM05D000792 ORTHO05D004195 2.4e-108 396.0 256 76.2
FAN02G1626 Fragaria x ananassa HOM05D000792 ORTHO05D004195 4.1e-108 395.2 255 76.1
ATR0772G088 Amborella trichopoda HOM05D000792 ORTHO05D004195 5.4e-108 394.8 257 76.7
Lj1g0010529 Lotus japonicus HOM05D000792 ORTHO05D004195 7.0e-108 394.4 255 76.1
Glyma.03G243800 Glycine max HOM05D000792 ORTHO05D004195 9.2e-108 394.0 256 76.2
MD12G1233700 Malus domestica HOM05D000792 ORTHO05D004195 1.2e-107 393.7 256 75.8
MELO3C004353.2 Cucumis melo HOM05D000792 ORTHO05D004195 2.0e-107 392.9 257 77.8
CsaV3_2G004410 Cucumis sativus L. HOM05D000792 ORTHO05D004195 2.7e-107 392.5 257 77.4
Sabra05G0042400 Salix brachista HOM05D000792 ORTHO05D004195 1.0e-106 390.6 269 74.7
THA.LOC104818655 Tarenaya hassleriana HOM05D000792 ORTHO05D004195 2.3e-106 389.4 255 75.7
Gohir.D08G230900 Gossypium hirsutum HOM05D000792 ORTHO05D004195 3.0e-106 389.0 257 73.5
Gorai.004G245300 Gossypium raimondii HOM05D000792 ORTHO05D004195 3.9e-106 388.7 257 73.5
Gohir.A08G213900 Gossypium hirsutum HOM05D000792 ORTHO05D004195 5.0e-106 388.3 258 73.6
TPR.G7014 Trifolium pratense HOM05D000792 ORTHO05D004195 5.0e-106 388.3 256 74.6
Sopen01g041660 Solanum pennellii HOM05D000792 ORTHO05D004195 6.6e-106 387.9 256 77.0
Ca_10069_v3 Cicer arietinum L. HOM05D000792 ORTHO05D004195 1.1e-105 387.1 256 75.8
Glyma.03G244500 Glycine max HOM05D000792 ORTHO05D004195 1.5e-105 386.7 256 75.0
Phvul.006G098200 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 1.5e-105 386.7 256 75.0
Psat3g008760 Pisum sativum HOM05D000792 ORTHO05D004195 1.9e-105 386.3 256 75.8
Solyc01g098090.3 Solanum lycopersicum HOM05D000792 ORTHO05D004195 2.5e-105 386.0 254 77.2
Ah.06g192810 Amaranthus hybridus HOM05D000792 ORTHO05D004195 3.3e-105 385.6 255 74.9
Aa31LG5G15360 Aethionema arabicum HOM05D000792 ORTHO05D004195 5.6e-105 384.8 256 73.8
Glyma.19G241300 Glycine max HOM05D000792 ORTHO05D004195 7.3e-105 384.4 256 75.0
VMungo0540G1958 Vigna mungo HOM05D000792 ORTHO05D004195 7.3e-105 384.4 256 74.2
Eucgr.H04403 Eucalyptus grandis HOM05D000792 ORTHO05D004195 9.5e-105 384.0 256 75.0
Gorai.013G122600 Gossypium raimondii HOM05D000792 ORTHO05D004195 9.5e-105 384.0 256 73.4
THA.LOC104821692 Tarenaya hassleriana HOM05D000792 ORTHO05D004195 9.5e-105 384.0 256 74.6
Hund22093 Selenicereus undatus HOM05D000792 ORTHO05D004195 1.2e-104 383.6 257 74.3
Ca_09396_v3 Cicer arietinum L. HOM05D000792 ORTHO05D004195 3.6e-104 382.1 256 75.0
ECA233G2068 Erigeron canadensis HOM05D000792 ORTHO05D004195 3.6e-104 382.1 257 72.8
Gohir.A13G106300 Gossypium hirsutum HOM05D000792 ORTHO05D004195 4.7e-104 381.7 257 72.4
Gohir.D13G109000 Gossypium hirsutum HOM05D000792 ORTHO05D004195 4.7e-104 381.7 256 73.0
Sed0009127 Sechium edule HOM05D000792 ORTHO05D004195 4.7e-104 381.7 257 75.5
Glyma.19G241800 Glycine max HOM05D000792 ORTHO05D004195 6.2e-104 381.3 256 74.6
CARHR079410 Cardamine hirsuta HOM05D000792 ORTHO05D004195 1.8e-103 379.8 257 73.5
Phvul.006G097800 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 1.8e-103 379.8 257 73.9
Sp3g03910 Schrenkiella parvula HOM05D000792 ORTHO05D004195 3.1e-103 379.0 256 74.2
Thhalv10020130m.g Eutrema salsugineum HOM05D000792 ORTHO05D004195 4.0e-103 378.6 257 73.9
Medtr1g081830 Medicago truncatula HOM05D000792 ORTHO05D004195 5.2e-103 378.3 256 74.2
Sed0026552 Sechium edule HOM05D000792 ORTHO05D004195 5.2e-103 378.3 256 75.4
AUR62005021 Chenopodium quinoa HOM05D000792 ORTHO05D004195 1.2e-102 377.1 259 73.4
Glyma.10G159000 Glycine max HOM05D000792 ORTHO05D004195 1.5e-102 376.7 257 72.0
PSO170G0948 Papaver somniferum HOM05D000792 ORTHO05D004195 1.5e-102 376.7 257 72.4
SalBow5G1543 Salvia bowleyana HOM05D000792 ORTHO05D004195 2.0e-102 376.3 281 71.2
A05p42490 Brassica napus HOM05D000792 ORTHO05D004195 7.5e-102 374.4 257 72.4
BraA05t23003Z Brassica rapa HOM05D000792 ORTHO05D004195 7.5e-102 374.4 257 72.4
Lalb_Chr15g0076961 Lupinus albus HOM05D000792 ORTHO05D004195 7.5e-102 374.4 256 74.6
Nitab4.5_0000087g0250 Nicotiana tabacum HOM05D000792 ORTHO05D004195 7.5e-102 374.4 256 75.4
Psat0s4348g0040 Pisum sativum HOM05D000792 ORTHO05D004195 7.5e-102 374.4 256 73.4
AT3G05090 Arabidopsis thaliana HOM05D000792 ORTHO05D004195 2.2e-101 372.9 256 73.0
BcaC05g29993 Brassica carinata HOM05D000792 ORTHO05D004195 2.2e-101 372.9 256 71.5
HPP92_016897 Vanilla planifolia HOM05D000792 ORTHO05D004195 2.2e-101 372.9 258 74.0
AL3G15470 Arabidopsis lyrata HOM05D000792 ORTHO05D004195 2.9e-101 372.5 256 73.0
arahy.Tifrunner.gnm1.ann1.GH6CGE Arachis hypogaea HOM05D000792 ORTHO05D004195 3.7e-101 372.1 257 72.0
HanXRQChr14g0429451 Helianthus annuus HOM05D000792 ORTHO05D004195 4.9e-101 371.7 257 72.8
VMungo0540G0969 Vigna mungo HOM05D000792 ORTHO05D004195 6.4e-101 371.3 256 73.4
Carub.0003s0433 Capsella rubella HOM05D000792 ORTHO05D004195 8.3e-101 370.9 256 73.0
Gorai.007G286900 Gossypium raimondii HOM05D000792 ORTHO05D004195 1.9e-100 369.8 256 71.9
Lalb_Chr18g0045241 Lupinus albus HOM05D000792 ORTHO05D004195 1.9e-100 369.8 258 72.5
Sp2g20380 Schrenkiella parvula HOM05D000792 ORTHO05D004195 2.4e-100 369.4 256 73.0
C05p62150 Brassica napus HOM05D000792 ORTHO05D004195 5.4e-100 368.2 256 70.3
BolC5t34873H Brassica oleracea HOM05D000792 ORTHO05D004195 5.4e-100 368.2 256 70.3
Gohir.D11G267100 Gossypium hirsutum HOM05D000792 ORTHO05D004195 7.0e-100 367.9 256 71.5
Gohir.A11G257200 Gossypium hirsutum HOM05D000792 ORTHO05D004195 6.6e-98 361.3 256 70.3
SHI18278 Sapria himalayana HOM05D000792 ORTHO05D004195 3.3e-97 359.0 250 70.4
Lsat_1_v5_gn_8_29340 Lactuca sativa HOM05D000792 ORTHO05D004195 2.8e-96 355.9 256 70.7
HanXRQChr12g0366721 Helianthus annuus HOM05D000792 ORTHO05D004195 3.6e-96 355.5 257 70.4
Zm00001eb139400 Zea mays HOM05D000792 ORTHO05D004195 3.6e-96 355.5 256 70.3
Zm00001eb407650 Zea mays HOM05D000792 ORTHO05D004195 8.1e-96 354.4 256 71.1
Lsat_1_v5_gn_0_840 Lactuca sativa HOM05D000792 ORTHO05D004195 6.8e-95 351.3 257 69.3
SEGI_34645 Sequoiadendron giganteum HOM05D000792 ORTHO05D004195 6.8e-95 351.3 258 69.4
Os12g0165000 Oryza sativa ssp. japonica HOM05D000792 ORTHO05D004195 1.5e-94 350.1 256 70.3
Peaxi162Scf00225g00310 Petunia axillaris HOM05D000792 ORTHO05D004195 3.4e-94 349.0 225 77.8
Medtr7g114370 Medicago truncatula HOM05D000792 ORTHO05D004195 2.9e-93 345.9 256 68.8
Peaxi162Scf00071g00939 Petunia axillaris HOM05D000792 ORTHO05D004195 4.9e-93 345.1 225 76.0
Solyc08g023590.4 Solanum lycopersicum HOM05D000792 ORTHO05D004195 4.9e-93 345.1 223 75.3
arahy.Tifrunner.gnm1.ann1.JA3EPN Arachis hypogaea HOM05D000792 ORTHO05D004195 8.3e-93 344.4 256 68.8
arahy.Tifrunner.gnm1.ann1.GRVM6J Arachis hypogaea HOM05D000792 ORTHO05D004195 2.4e-92 342.8 256 68.8
A03p33980 Brassica napus HOM05D000792 ORTHO05D004195 6.0e-91 338.2 256 66.8
BraA03t12573Z Brassica rapa HOM05D000792 ORTHO05D004195 1.3e-90 337.0 256 66.8
VMungo0720G0333 Vigna mungo HOM05D000792 ORTHO05D004195 3.3e-89 332.4 257 65.0
BcaC01g04335 Brassica carinata HOM05D000792 ORTHO05D004195 5.6e-89 331.6 256 66.0
C03p41360 Brassica napus HOM05D000792 ORTHO05D004195 7.3e-89 331.3 256 66.0
BolC3t16419H Brassica oleracea HOM05D000792 ORTHO05D004195 7.3e-89 331.3 256 66.0
Duzib177G0519 Durio zibethinus HOM05D000792 ORTHO05D004195 9.5e-89 330.9 256 66.0
Lsat_1_v5_gn_2_6701 Lactuca sativa HOM05D000792 ORTHO05D004195 3.6e-88 328.9 256 67.2
PGR004G0598 Punica granatum HOM05D000792 ORTHO05D004195 3.1e-87 325.9 237 70.5
Pp3c14_23300 Physcomitrium patens HOM05D000792 ORTHO05D004195 8.4e-85 317.8 258 65.1
HanXRQChr16g0498011 Helianthus annuus HOM05D000792 ORTHO05D004195 3.5e-83 312.4 223 70.9
Pp3c2_9310 Physcomitrium patens HOM05D000792 ORTHO05D004195 1.0e-82 310.8 259 63.7
BcaB04g19281 Brassica carinata HOM05D000792 ORTHO05D004195 3.3e-81 305.8 256 62.5
Mapoly0016s0038 Marchantia polymorpha HOM05D000792 ORTHO05D004195 3.1e-79 299.3 247 62.8
SMO367G0211 Selaginella moellendorffii HOM05D000792 ORTHO05D004195 4.2e-76 288.9 258 59.7
Pp3c1_36050 Physcomitrium patens HOM05D000792 ORTHO05D004195 4.6e-75 285.4 276 56.2
CBR_g51918 Chara braunii HOM05D000792 ORTHO05D004195 2.5e-73 279.6 302 52.0
TAR362G0581 Trochodendron aralioides HOM05D000792 ORTHO05D004195 1.3e-72 277.3 245 60.4
AagrBONN_evm.TU.Sc2ySwM_369.430 Anthoceros agrestis HOM05D000792 ORTHO05D004195 2.4e-68 263.1 298 49.0
Lj7C479G6 Lonicera japonica HOM05D000792 ORTHO05D004195 3.2e-68 262.7 171 76.0
Duzib128G1364 Durio zibethinus HOM05D000792 ORTHO05D004195 2.8e-64 249.6 177 68.4
unitig_27.g25324 Utricularia gibba HOM05D000792 ORTHO05D004195 7.9e-51 204.9 160 63.8
Lsat_1_v5_gn_3_96121 Lactuca sativa HOM05D000792 ORTHO05D004195 8.8e-42 174.9 193 51.8
Sopen00g011420 Solanum pennellii HOM05D000792 ORTHO05D004195 1.5e-38 164.1 118 72.9
Zm00001eb333910 Zea mays HOM05D000792 ORTHO05D004195 1.1e-31 141.4 87 78.2
RcHm_v2.0_Chr2g0132051 Rosa chinensis HOM05D000792 ORTHO05D004195 1.1e-28 131.3 99 68.7
Glyma.16G018700 Glycine max HOM05D000792 ORTHO05D004195 8.8e-26 121.7 89 66.3
PRCOL_00004864 Prasinoderma coloniale HOM05D000792 ORTHO05D004195 2.6e-25 120.2 253 33.2
Cfa025693 Carpinus fangiana HOM05D000792 ORTHO05D004195 1.4e-23 114.4 276 33.3
Lsat_1_v5_gn_5_26640 Lactuca sativa HOM05D000792 ORTHO05D004195 8.5e-21 105.1 187 39.6
Phvul.007G184400 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 1.8e-18 97.4 78 62.8
Cre13.g583250 Chlamydomonas reinhardtii HOM05D000792 ORTHO05D004195 1.4e-15 87.8 295 29.2
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 2.7e-11 73.6 254 27.2
Cre10.g420650 Chlamydomonas reinhardtii HOM05D010245 ORTHO05D017828 2.2e-08 63.9 135 31.9
Cre06.g280350 Chlamydomonas reinhardtii HOM05D042708 ORTHO05D000301 3.1e-07 60.1 264 25.8
Os07g0408100 Oryza sativa ssp. japonica HOM05D002332 ORTHO05D002509 1.2e-06 58.2 244 25.4
unitig_748.g7503 Utricularia gibba HOM05D000453 ORTHO05D006365 1.2e-06 58.2 109 33.9
Pp3c22_5850 Physcomitrium patens HOM05D006776 ORTHO05D007603 2.0e-06 57.4 249 24.5
Lj1g0004747 Lotus japonicus HOM05D002332 ORTHO05D002509 5.9e-06 55.8 228 25.9


User provided reference genes

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