Gene: Sopen00g011420

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen00g011420
  • Transcript Identifier Sopen00g011420.1
  • Gene Type Coding gene
  • Location Spenn-ch00 : 38903251-38905562 : negative

Gene Family Information

  • ID HOM05D000792
  • #Genes/#Species 746/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen00g011420.1

Descriptions

  • Description Encodes a DCAF protein. Mutants are defective in lateral root development and suggest roles for DDB1≠Cul4ñmediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence. | LATERAL ROOT STIMULATOR 1 (LRS1) | FUNCTIONS IN: nucleotide binding | INVOLVED IN: lateral root formation | LOCATED IN: CUL4 RING ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , Protein of unknown function DUF3337 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0016747
ISO
PLAZA Homology (enrichment)acyltransferase activity, transferring groups other than amino-acyl groups HOM05D000792

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
35.1 not assigned.annotated