Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050695.1 Olea europaea HOM05D000344 ORTHO05D000934 2.3e-99 365.5 180 100.0
Dinv13320 Davidia involucrata HOM05D000344 ORTHO05D000934 3.5e-39 165.6 248 45.2
Rhsim06G0185400 Rhododendron simsii HOM05D000344 ORTHO05D000934 8.0e-36 154.5 190 52.6
Cc05_g10380 Coffea canephora HOM05D000344 ORTHO05D000934 1.4e-35 153.7 240 42.9
Actinidia04587 Actinidia chinensis HOM05D000344 ORTHO05D000934 3.0e-35 152.5 199 50.3
Actinidia12844 Actinidia chinensis HOM05D000344 ORTHO05D000934 4.4e-34 148.7 197 49.7
CSS0004308 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D000934 1.2e-31 140.6 183 49.7
CSS0039814 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D000934 1.2e-31 140.6 183 49.7
GSVIVG01000696001 Vitis vinifera HOM05D000344 ORTHO05D000934 5.9e-31 138.3 183 51.9
vmacro12009 Vaccinium macrocarpon HOM05D000344 ORTHO05D000934 3.6e-28 129.0 175 48.0
Lj8C142T7 Lonicera japonica HOM05D000344 ORTHO05D000934 6.1e-28 128.3 212 42.9
PGSC0003DMG400027641 Solanum tuberosum HOM05D000344 ORTHO05D000934 5.2e-27 125.2 220 42.7
Nitab4.5_0006614g0020 Nicotiana tabacum HOM05D000344 ORTHO05D000934 3.4e-26 122.5 236 40.7
Hma1.2p1_0280F.1_g112960 Hydrangea macrophylla HOM05D000344 ORTHO05D000934 4.4e-26 122.1 181 45.3
PGR031G3787 Punica granatum HOM05D000344 ORTHO05D000934 5.7e-26 121.7 200 44.0
Peaxi162Scf00111g00921 Petunia axillaris HOM05D000344 ORTHO05D000934 7.5e-26 121.3 246 39.0
Sabra11G0089000 Salix brachista HOM05D000344 ORTHO05D000934 7.5e-26 121.3 190 44.2
DCAR_013790 Daucus carota HOM05D000344 ORTHO05D000934 9.8e-26 120.9 197 41.1
MD05G1206800 Malus domestica HOM05D000344 ORTHO05D000934 1.1e-24 117.5 189 43.4
COL.COLO4_17426 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.4e-24 117.1 188 44.1
Prupe.4G150400 Prunus persica HOM05D000344 ORTHO05D000934 4.1e-24 115.5 190 43.2
Nn4g26578 Nelumbo nucifera HOM05D000344 ORTHO05D000934 1.2e-23 114.0 202 41.6
Nitab4.5_0001140g0260 Nicotiana tabacum HOM05D000344 ORTHO05D000934 2.0e-23 113.2 236 39.0
DCAR_019622 Daucus carota HOM05D000344 ORTHO05D000934 7.8e-23 111.3 186 42.5
Hund02316 Selenicereus undatus HOM05D000344 ORTHO05D000934 7.8e-23 111.3 153 50.3
Sopen07g030100 Solanum pennellii HOM05D000344 ORTHO05D000934 2.9e-22 109.4 220 40.0
Eucgr.F03211 Eucalyptus grandis HOM05D000344 ORTHO05D000934 6.6e-22 108.2 243 37.0
Haze_08487 Corylus avellana HOM05D000344 ORTHO05D000934 8.6e-22 107.8 185 40.0
AUR62037966 Chenopodium quinoa HOM05D000344 ORTHO05D000934 1.5e-21 107.1 171 44.4
HanXRQChr12g0373551 Helianthus annuus HOM05D000344 ORTHO05D000934 1.9e-21 106.7 152 50.0
CAN.G375.91 Capsicum annuum HOM05D000344 ORTHO05D000934 3.3e-21 105.9 215 40.9
MD10G1193900 Malus domestica HOM05D000344 ORTHO05D000934 3.3e-21 105.9 187 40.6
AUR62043084 Chenopodium quinoa HOM05D000344 ORTHO05D000934 5.6e-21 105.1 157 46.5
Ciclev10018666m.g Citrus clementina HOM05D000344 ORTHO05D000934 5.6e-21 105.1 228 37.7
THA.LOC104813300 Tarenaya hassleriana HOM05D000344 ORTHO05D000934 9.5e-21 104.4 186 43.0
Cfa019460 Carpinus fangiana HOM05D000344 ORTHO05D000934 1.2e-20 104.0 185 39.5
Gorai.002G039300 Gossypium raimondii HOM05D000344 ORTHO05D000934 1.2e-20 104.0 189 42.3
ECA234G2148 Erigeron canadensis HOM05D000344 ORTHO05D000934 2.8e-20 102.8 148 48.6
Solyc07g061780.4 Solanum lycopersicum HOM05D000344 ORTHO05D000934 2.8e-20 102.8 220 39.1
Potri.001G378900 Populus trichocarpa HOM05D000344 ORTHO05D000934 4.7e-20 102.1 181 43.1
MBI10_g30414_MAGBIO Magnolia biondii HOM05D000344 ORTHO05D000934 1.8e-19 100.1 177 37.9
Gohir.D01G030100 Gossypium hirsutum HOM05D000344 ORTHO05D000934 2.3e-19 99.8 189 41.3
Cpa.g.sc77.86 Carica papaya HOM05D000344 ORTHO05D000934 4.0e-19 99.0 186 40.3
Potri.011G095200 Populus trichocarpa HOM05D000344 ORTHO05D000934 4.0e-19 99.0 155 44.5
Ah.04g163820 Amaranthus hybridus HOM05D000344 ORTHO05D000934 5.2e-19 98.6 154 42.9
Aa31LG7G1910 Aethionema arabicum HOM05D000344 ORTHO05D000934 4.4e-18 95.5 145 44.8
EL10Ac4g08494 Beta vulgaris HOM05D000344 ORTHO05D000934 5.7e-18 95.1 162 43.2
THA.LOC104813982 Tarenaya hassleriana HOM05D000344 ORTHO05D000934 7.5e-18 94.7 147 46.3
arahy.Tifrunner.gnm1.ann1.0B7JEM Arachis hypogaea HOM05D000344 ORTHO05D000934 4.9e-17 92.0 178 39.3
arahy.Tifrunner.gnm1.ann1.J12N8U Arachis hypogaea HOM05D000344 ORTHO05D000934 4.9e-17 92.0 178 39.3
Lalb_Chr25g0285431 Lupinus albus HOM05D000344 ORTHO05D000934 6.4e-17 91.7 216 37.0
Lalb_Chr01g0016091 Lupinus albus HOM05D000344 ORTHO05D000934 8.3e-17 91.3 208 37.5
Gorai.007G335200 Gossypium raimondii HOM05D000344 ORTHO05D000934 1.1e-16 90.9 192 40.1
TAR627G0581 Trochodendron aralioides HOM05D000344 ORTHO05D000934 1.1e-16 90.9 82 64.6
Gohir.D11G301500 Gossypium hirsutum HOM05D000344 ORTHO05D000934 7.0e-16 88.2 192 39.6
CARHR017650 Cardamine hirsuta HOM05D000344 ORTHO05D000934 1.2e-15 87.4 141 45.4
ATR1091G070 Amborella trichopoda HOM05D000344 ORTHO05D000934 2.7e-15 86.3 176 39.2
Nn3g20761 Nelumbo nucifera HOM05D000344 ORTHO05D000934 2.7e-15 86.3 229 34.1
Sc16g0007900 Simmondsia chinensis HOM05D000344 ORTHO05D000934 2.7e-15 86.3 191 37.7
Gorai.002G039600 Gossypium raimondii HOM05D000344 ORTHO05D000934 4.6e-15 85.5 146 42.5
Glyma.15G248200 Glycine max HOM05D000344 ORTHO05D000934 5.9e-15 85.1 233 35.6
Lsat_1_v5_gn_9_101220 Lactuca sativa HOM05D000344 ORTHO05D000934 5.9e-15 85.1 120 49.2
Lj3g0013695 Lotus japonicus HOM05D000344 ORTHO05D000934 7.8e-15 84.7 178 39.3
Duzib268G1504 Durio zibethinus HOM05D000344 ORTHO05D000934 1.3e-14 84.0 191 36.1
Carub.0001s1684 Capsella rubella HOM05D000344 ORTHO05D000934 1.7e-14 83.6 141 44.0
QL04p070131 Quercus lobata HOM05D000344 ORTHO05D000934 1.7e-14 83.6 243 32.5
Ca_03395_v3 Cicer arietinum L. HOM05D000344 ORTHO05D000934 2.3e-14 83.2 178 37.6
Gohir.A11G291100 Gossypium hirsutum HOM05D000344 ORTHO05D000934 2.3e-14 83.2 182 39.6
Thecc.09G140500 Theobroma cacao HOM05D000344 ORTHO05D000934 8.6e-14 81.3 82 58.5
VMungo1080G0073 Vigna mungo HOM05D000344 ORTHO05D000934 8.6e-14 81.3 215 36.7
MBI07_g26348_MAGBIO Magnolia biondii HOM05D000344 ORTHO05D000934 1.5e-13 80.5 202 31.7
Duzib213G1061 Durio zibethinus HOM05D000344 ORTHO05D000934 5.6e-13 78.6 193 35.2
HanXRQChr13g0389811 Helianthus annuus HOM05D000344 ORTHO05D000934 9.5e-13 77.8 127 45.7
PSO675G7780 Papaver somniferum HOM05D000344 ORTHO05D000934 1.2e-12 77.4 170 40.6
RcHm_v2.0_Chr5g0028031 Rosa chinensis HOM05D000344 ORTHO05D000934 2.8e-12 76.3 182 36.8
PSO541G2670 Papaver somniferum HOM05D000344 ORTHO05D000934 3.6e-12 75.9 170 40.6
Glyma.13G259700 Glycine max HOM05D000344 ORTHO05D000934 1.2e-10 70.9 237 32.5
CANSAT56G0229 Cannabis sativa HOM05D000344 ORTHO05D000934 2.0e-10 70.1 188 30.3
Dinv26671 Davidia involucrata HOM05D000344 ORTHO05D000934 2.0e-10 70.1 227 33.0
Os02g0244300 Oryza sativa ssp. japonica HOM05D000344 ORTHO05D000934 4.4e-10 68.9 190 32.1
Phvul.005G061400 Phaseolus vulgaris HOM05D000344 ORTHO05D000934 5.8e-10 68.6 232 31.9
unitig_22.g6533 Utricularia gibba HOM05D000344 ORTHO05D000934 7.5e-10 68.2 154 39.0
FAN11G1238 Fragaria x ananassa HOM05D000344 ORTHO05D000934 9.8e-10 67.8 175 33.7
BcaC05g25668 Brassica carinata HOM05D000344 ORTHO05D000934 3.7e-09 65.9 183 35.0
FAN16G2595 Fragaria x ananassa HOM05D000344 ORTHO05D000934 6.4e-09 65.1 175 33.1
FAN25G0217 Fragaria x ananassa HOM05D000344 ORTHO05D000934 6.4e-09 65.1 175 34.9
HPP92_023221 Vanilla planifolia HOM05D000344 ORTHO05D000934 6.4e-09 65.1 173 35.3
Zm00001eb238660 Zea mays HOM05D000344 ORTHO05D000934 2.4e-08 63.2 192 30.7
Manes.15G100900 Manihot esculenta HOM05D000344 ORTHO05D000934 1.2e-07 60.8 190 31.6
Zm00001eb204570 Zea mays HOM05D000344 ORTHO05D000934 1.2e-07 60.8 211 29.9
FAN21G1471 Fragaria x ananassa HOM05D000344 ORTHO05D000934 1.6e-07 60.5 156 35.9


User provided reference genes

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