Gene: Sopen07g030100

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g030100
  • Transcript Identifier Sopen07g030100.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 75760670-75767714 : positive

Gene Family Information

  • ID HOM05D000344
  • #Genes/#Species 1371/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g030100.1

Descriptions

  • Description Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant. | ubiquitin-specific protease 15 (UBP15) | CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 ., Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IEA
InterProprotein deubiquitination
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G17110
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT1G17110
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT1G17110
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G17110
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT1G17110
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT1G17110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G17110

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G17110
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G17110

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002893 Zinc finger, MYND-type
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765 Papain-like cysteine peptidase superfamily
Mapman id Description
19.2.3.1.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP15-21)