Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 7.6e-45 183.3 85 100.0
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 6.2e-31 137.1 79 77.2
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 2.4e-30 135.2 79 74.7
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 7.6e-29 130.2 80 72.5
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 9.9e-29 129.8 79 73.4
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 8.4e-28 126.7 76 76.3
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 1.1e-27 126.3 76 73.7
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.9e-27 125.6 74 74.3
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 5.5e-27 124.0 74 73.0
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 7.1e-27 123.6 74 73.0
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 9.3e-27 123.2 76 71.1
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 4.6e-26 120.9 73 71.2
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 6.0e-26 120.6 71 74.6
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 7.9e-26 120.2 74 70.3
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 1.0e-25 119.8 75 66.7
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 1.8e-25 119.0 71 71.8
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 2.3e-25 118.6 74 71.6
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 2.3e-25 118.6 74 68.9
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 3.0e-25 118.2 74 71.6
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 3.9e-25 117.9 71 74.6
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 8.7e-25 116.7 74 68.9
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 2.5e-24 115.2 72 76.4
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 4.3e-24 114.4 72 66.7
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 5.6e-24 114.0 72 70.8
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 3.7e-23 111.3 72 66.7
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 3.7e-23 111.3 74 67.6
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 8.2e-23 110.2 64 73.4
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.4e-22 109.4 72 65.3
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 1.4e-22 109.4 73 65.8
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 1.8e-22 109.0 74 64.9
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 1.8e-22 109.0 77 63.6
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.8e-22 109.0 71 64.8
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 2.4e-22 108.6 77 62.3
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 5.3e-22 107.5 64 71.9
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 9.0e-22 106.7 71 64.8
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 3.4e-21 104.8 71 69.0
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 4.5e-21 104.4 71 63.4
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 5.8e-21 104.0 72 63.9
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 5.8e-21 104.0 71 62.0
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 7.6e-21 103.6 71 63.4
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 7.6e-21 103.6 71 59.2
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 7.6e-21 103.6 60 73.3
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 7.6e-21 103.6 78 60.3
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 1.0e-20 103.2 75 64.0
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 1.3e-20 102.8 71 59.2
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 1.3e-20 102.8 71 62.0
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 1.7e-20 102.4 74 59.5
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 2.2e-20 102.1 75 60.0
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 2.2e-20 102.1 79 55.7
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 2.2e-20 102.1 71 62.0
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 2.9e-20 101.7 73 60.3
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 3.8e-20 101.3 71 64.8
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 3.8e-20 101.3 71 60.6
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 3.8e-20 101.3 79 55.7
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 4.9e-20 100.9 77 59.7
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 6.5e-20 100.5 70 60.0
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 8.4e-20 100.1 72 65.3
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 8.4e-20 100.1 72 62.5
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.1e-19 99.8 74 56.8
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 1.1e-19 99.8 69 62.3
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 1.1e-19 99.8 71 59.2
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 1.4e-19 99.4 72 62.5
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.4e-19 99.4 72 62.5
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 1.9e-19 99.0 74 58.1
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 1.9e-19 99.0 70 61.4
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 2.5e-19 98.6 71 63.4
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 3.2e-19 98.2 72 61.1
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 7.1e-19 97.1 75 60.0
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.7e-18 95.1 73 57.5
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.7e-18 95.1 73 57.5
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 2.7e-18 95.1 71 54.9
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 3.5e-18 94.7 63 60.3
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 3.5e-18 94.7 74 55.4
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 3.5e-18 94.7 73 50.7
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 6.0e-18 94.0 71 56.3
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 6.0e-18 94.0 79 54.4
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 1.3e-17 92.8 72 58.3
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 1.8e-17 92.4 71 57.7
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 2.3e-17 92.0 77 53.2
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 2.3e-17 92.0 72 58.3
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 3.0e-17 91.7 65 63.1
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 6.7e-17 90.5 68 52.9
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 8.7e-17 90.1 68 55.9
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 1.1e-16 89.7 66 57.6
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 1.5e-16 89.4 71 53.5
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 1.9e-16 89.0 57 63.2
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 4.3e-16 87.8 66 57.6
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 4.3e-16 87.8 66 57.6
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 4.3e-16 87.8 68 54.4
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 4.3e-16 87.8 71 56.3
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 9.7e-16 86.7 68 54.4
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 1.6e-15 85.9 66 56.1
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 1.6e-15 85.9 66 56.1
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 1.6e-15 85.9 66 56.1
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 3.7e-15 84.7 60 60.0
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.1e-14 83.2 65 55.4
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 2.4e-14 82.0 68 51.5
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 2.4e-14 82.0 56 64.3
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 2.4e-14 82.0 76 47.4
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 5.3e-14 80.9 74 55.4
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 2.6e-13 78.6 63 49.2
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 1.3e-12 76.3 68 48.5
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.2e-12 75.5 57 52.6
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 8.5e-12 73.6 63 60.3
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 1.4e-11 72.8 62 50.0
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 2.5e-11 72.0 83 44.6
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 4.2e-11 71.2 64 53.1
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.7e-10 68.6 57 54.4
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 6.1e-10 67.4 44 72.7
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 3.0e-09 65.1 54 48.1
SGA_v2.0_scaffold7G03663 Striga asiatica HOM05D000015 ORTHO05D000984 2.8e-07 58.5 31 87.1


User provided reference genes

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