Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049820.1 Olea europaea HOM05D001747 ORTHO05D001696 7.6e-65 250.4 128 100.0
Oeu054288.1 Olea europaea HOM05D001747 ORTHO05D001696 1.3e-19 100.1 50 96.0
unitig_52.g17214 Utricularia gibba HOM05D001747 ORTHO05D001696 5.3e-18 94.7 55 81.8
Migut.E00818 Erythranthe guttata HOM05D001747 ORTHO05D001696 2.0e-17 92.8 58 77.6
Nitab4.5_0011581g0020 Nicotiana tabacum HOM05D001747 ORTHO05D001696 4.5e-17 91.7 50 86.0
Migut.O00359 Erythranthe guttata HOM05D001747 ORTHO05D001696 7.7e-17 90.9 55 80.0
Peaxi162Scf00715g00120 Petunia axillaris HOM05D001747 ORTHO05D001696 1.0e-16 90.5 50 84.0
Solyc08g077550.3 Solanum lycopersicum HOM05D001747 ORTHO05D001696 1.0e-16 90.5 50 84.0
Sopen08g026120 Solanum pennellii HOM05D001747 ORTHO05D001696 1.0e-16 90.5 50 84.0
PGSC0003DMG400001854 Solanum tuberosum HOM05D001747 ORTHO05D001696 1.0e-16 90.5 50 84.0
CAN.G1445.12 Capsicum annuum HOM05D001747 ORTHO05D001696 1.3e-16 90.1 50 82.0
Oeu028052.1 Olea europaea HOM05D001747 ORTHO05D001696 1.3e-16 90.1 50 86.0
Actinidia25925 Actinidia chinensis HOM05D001747 ORTHO05D001696 2.9e-16 89.0 50 82.0
MSTRG.1956 Avicennia marina HOM05D001747 ORTHO05D001696 2.9e-16 89.0 50 82.0
vmacro23242 Vaccinium macrocarpon HOM05D001747 ORTHO05D001696 3.8e-16 88.6 51 82.4
CSS0009084 Camellia sinensis var. sinensis HOM05D001747 ORTHO05D001696 5.0e-16 88.2 50 82.0
Hma1.2p1_1672F.1_g296870 Hydrangea macrophylla HOM05D001747 ORTHO05D001696 5.0e-16 88.2 50 80.0
MSTRG.13767 Avicennia marina HOM05D001747 ORTHO05D001696 6.5e-16 87.8 55 76.4
Hma1.2p1_1510F.1_g287860 Hydrangea macrophylla HOM05D001747 ORTHO05D001696 1.1e-15 87.0 50 78.0
vmacro14116 Vaccinium macrocarpon HOM05D001747 ORTHO05D001696 1.1e-15 87.0 50 82.0
Cc08_g01500 Coffea canephora HOM05D001747 ORTHO05D001696 1.5e-15 86.7 49 81.6
TPR.G17140 Trifolium pratense HOM05D001747 ORTHO05D001696 1.9e-15 86.3 80 51.2
Dinv25158 Davidia involucrata HOM05D001747 ORTHO05D001696 3.2e-15 85.5 50 80.0
Rhsim07G0119800 Rhododendron simsii HOM05D001747 ORTHO05D001696 3.2e-15 85.5 50 80.0
arahy.Tifrunner.gnm1.ann1.1L1QBU Arachis hypogaea HOM05D001747 ORTHO05D001696 4.2e-15 85.1 74 60.8
PGR031G0447 Punica granatum HOM05D001747 ORTHO05D001696 4.2e-15 85.1 70 58.6
TAR375G0178 Trochodendron aralioides HOM05D001747 ORTHO05D001696 5.5e-15 84.7 50 80.0
Dinv28893 Davidia involucrata HOM05D001747 ORTHO05D001696 7.2e-15 84.3 50 78.0
Eucgr.D02141 Eucalyptus grandis HOM05D001747 ORTHO05D001696 9.4e-15 84.0 50 78.0
Duzib068G0774 Durio zibethinus HOM05D001747 ORTHO05D001696 2.1e-14 82.8 56 75.0
Duzib084G0192 Durio zibethinus HOM05D001747 ORTHO05D001696 2.1e-14 82.8 56 75.0
Duzib205G0875 Durio zibethinus HOM05D001747 ORTHO05D001696 2.1e-14 82.8 56 75.0
Thecc.03G237400 Theobroma cacao HOM05D001747 ORTHO05D001696 2.1e-14 82.8 56 75.0
EL10Ac5g12222 Beta vulgaris HOM05D001747 ORTHO05D001696 2.7e-14 82.4 50 76.0
Sc22g0001190 Simmondsia chinensis HOM05D001747 ORTHO05D001696 2.7e-14 82.4 50 76.0
AUR62007197 Chenopodium quinoa HOM05D001747 ORTHO05D001696 4.7e-14 81.6 50 76.0
AUR62018805 Chenopodium quinoa HOM05D001747 ORTHO05D001696 4.7e-14 81.6 50 76.0
Lj4g0026409 Lotus japonicus HOM05D001747 ORTHO05D001696 4.7e-14 81.6 50 74.0
Lalb_Chr05g0220811 Lupinus albus HOM05D001747 ORTHO05D001696 4.7e-14 81.6 50 70.0
Hund11302 Selenicereus undatus HOM05D001747 ORTHO05D001696 4.7e-14 81.6 50 76.0
CANSAT21G1966 Cannabis sativa HOM05D001747 ORTHO05D001696 6.1e-14 81.3 50 74.0
MD04G1053700 Malus domestica HOM05D001747 ORTHO05D001696 8.0e-14 80.9 50 74.0
Psat4g076600 Pisum sativum HOM05D001747 ORTHO05D001696 8.0e-14 80.9 50 70.0
Prupe.5G052300 Prunus persica HOM05D001747 ORTHO05D001696 8.0e-14 80.9 50 72.0
Hund14468 Selenicereus undatus HOM05D001747 ORTHO05D001696 8.0e-14 80.9 50 72.0
VMungo0464G0981 Vigna mungo HOM05D001747 ORTHO05D001696 8.0e-14 80.9 50 72.0
ClCG10G002080 Citrullus lanatus HOM05D001747 ORTHO05D001696 1.0e-13 80.5 50 70.0
Gohir.A08G161800 Gossypium hirsutum HOM05D001747 ORTHO05D001696 1.0e-13 80.5 56 73.2
QL12p008322 Quercus lobata HOM05D001747 ORTHO05D001696 1.0e-13 80.5 50 74.0
Ciclev10021747m.g Citrus clementina HOM05D001747 ORTHO05D001696 1.4e-13 80.1 51 76.5
MELO3C013889.2 Cucumis melo HOM05D001747 ORTHO05D001696 1.4e-13 80.1 50 70.0
CsaV3_3G002170 Cucumis sativus L. HOM05D001747 ORTHO05D001696 1.4e-13 80.1 50 70.0
Glyma.05G067700 Glycine max HOM05D001747 ORTHO05D001696 1.4e-13 80.1 50 70.0
Ca_22027_v3 Cicer arietinum L. HOM05D001747 ORTHO05D001696 1.8e-13 79.7 75 50.7
Glyma.17G149800 Glycine max HOM05D001747 ORTHO05D001696 1.8e-13 79.7 50 70.0
Gohir.A03G003500 Gossypium hirsutum HOM05D001747 ORTHO05D001696 1.8e-13 79.7 56 71.4
Gohir.D03G168900 Gossypium hirsutum HOM05D001747 ORTHO05D001696 1.8e-13 79.7 56 71.4
Lalb_Chr09g0324041 Lupinus albus HOM05D001747 ORTHO05D001696 1.8e-13 79.7 50 70.0
Medtr4g099140 Medicago truncatula HOM05D001747 ORTHO05D001696 2.3e-13 79.3 75 52.0
Nitab4.5_0001981g0010 Nicotiana tabacum HOM05D001747 ORTHO05D001696 2.3e-13 79.3 44 84.1
QL12p008276 Quercus lobata HOM05D001747 ORTHO05D001696 3.0e-13 79.0 50 72.0
PSO782G2963 Papaver somniferum HOM05D001747 ORTHO05D001696 5.2e-13 78.2 52 71.2
CiPaw.12G056700 Carya illinoinensis HOM05D001747 ORTHO05D001696 6.8e-13 77.8 50 72.0
COL.COLO4_06698 Corchorus olitorius HOM05D001747 ORTHO05D001696 6.8e-13 77.8 99 45.5
Lj8C279G4 Lonicera japonica HOM05D001747 ORTHO05D001696 6.8e-13 77.8 51 74.5
Lj8C286G7 Lonicera japonica HOM05D001747 ORTHO05D001696 6.8e-13 77.8 51 74.5
MD11G1036500 Malus domestica HOM05D001747 ORTHO05D001696 6.8e-13 77.8 50 70.0
Os06g0715100 Oryza sativa ssp. japonica HOM05D001747 ORTHO05D001696 6.8e-13 77.8 52 73.1
Phvul.003G226600 Phaseolus vulgaris HOM05D001747 ORTHO05D001696 6.8e-13 77.8 50 68.0
Atru.chr9.1151 Acer truncatum HOM05D001747 ORTHO05D001696 8.8e-13 77.4 51 74.5
Gorai.004G190700 Gossypium raimondii HOM05D001747 ORTHO05D001696 8.8e-13 77.4 56 69.6
HanXRQChr17g0535691 Helianthus annuus HOM05D001747 ORTHO05D001696 8.8e-13 77.4 50 72.0
Sed0006691 Sechium edule HOM05D001747 ORTHO05D001696 8.8e-13 77.4 50 70.0
Gorai.003G179000 Gossypium raimondii HOM05D001747 ORTHO05D001696 1.2e-12 77.0 56 69.6
Sabra03G0055300 Salix brachista HOM05D001747 ORTHO05D001696 1.2e-12 77.0 51 74.5
Gohir.D08G181800 Gossypium hirsutum HOM05D001747 ORTHO05D001696 1.5e-12 76.6 56 67.9
PSO063G6707 Papaver somniferum HOM05D001747 ORTHO05D001696 2.0e-12 76.3 52 69.2
arahy.Tifrunner.gnm1.ann1.0KII0J Arachis hypogaea HOM05D001747 ORTHO05D001696 2.6e-12 75.9 50 66.0
arahy.Tifrunner.gnm1.ann1.Z4VNZV Arachis hypogaea HOM05D001747 ORTHO05D001696 2.6e-12 75.9 50 66.0
Lalb_Chr16g0386331 Lupinus albus HOM05D001747 ORTHO05D001696 2.6e-12 75.9 50 64.0
AL4G31200 Arabidopsis lyrata HOM05D001747 ORTHO05D001696 3.4e-12 75.5 52 71.2
AT2G35190 Arabidopsis thaliana HOM05D001747 ORTHO05D001696 3.4e-12 75.5 52 71.2
Carub.0004s1688 Capsella rubella HOM05D001747 ORTHO05D001696 3.4e-12 75.5 52 71.2
CARHR129350 Cardamine hirsuta HOM05D001747 ORTHO05D001696 3.4e-12 75.5 52 71.2
Cfa012354 Carpinus fangiana HOM05D001747 ORTHO05D001696 3.4e-12 75.5 50 66.0
Thhalv10017097m.g Eutrema salsugineum HOM05D001747 ORTHO05D001696 3.4e-12 75.5 52 71.2
TWI15G0917 Tripterygium wilfordii HOM05D001747 ORTHO05D001696 3.4e-12 75.5 57 70.2
TWI15G0945 Tripterygium wilfordii HOM05D001747 ORTHO05D001696 3.4e-12 75.5 57 70.2
GSVIVG01013276001 Vitis vinifera HOM05D001747 ORTHO05D001696 3.4e-12 75.5 49 69.4
Lsat_1_v5_gn_3_15780 Lactuca sativa HOM05D001747 ORTHO05D001696 7.5e-12 74.3 51 72.5
Manes.17G022842 Manihot esculenta HOM05D001747 ORTHO05D001696 9.8e-12 73.9 51 72.5
CDE02G3602 Ceratophyllum demersum HOM05D001747 ORTHO05D001696 1.3e-11 73.6 72 54.2
FAN08G0775 Fragaria x ananassa HOM05D001747 ORTHO05D001696 1.3e-11 73.6 50 66.0
FAN13G0395 Fragaria x ananassa HOM05D001747 ORTHO05D001696 1.3e-11 73.6 50 66.0
Potri.001G149200 Populus trichocarpa HOM05D001747 ORTHO05D001696 1.3e-11 73.6 51 70.6
Potri.003G085200 Populus trichocarpa HOM05D001747 ORTHO05D001696 1.3e-11 73.6 51 70.6
RcHm_v2.0_Chr7g0206541 Rosa chinensis HOM05D001747 ORTHO05D001696 1.3e-11 73.6 50 66.0
BcaB06g28808 Brassica carinata HOM05D001747 ORTHO05D001696 1.7e-11 73.2 52 69.2
CiPaw.11G084800 Carya illinoinensis HOM05D001747 ORTHO05D001696 1.7e-11 73.2 53 58.5
Haze_08341 Corylus avellana HOM05D001747 ORTHO05D001696 1.7e-11 73.2 50 64.0
ECA246G2157 Erigeron canadensis HOM05D001747 ORTHO05D001696 1.7e-11 73.2 52 69.2
THA.LOC104814456 Tarenaya hassleriana HOM05D001747 ORTHO05D001696 1.7e-11 73.2 52 69.2
THA.LOC104807941 Tarenaya hassleriana HOM05D001747 ORTHO05D001696 2.2e-11 72.8 52 69.2
FvH4_5g20760 Fragaria vesca HOM05D001747 ORTHO05D001696 2.8e-11 72.4 50 66.0
FAN18G2388 Fragaria x ananassa HOM05D001747 ORTHO05D001696 2.8e-11 72.4 50 66.0
QL93p0092_0052 Quercus lobata HOM05D000005 ORTHO05D000012 2.8e-11 72.4 51 66.7
TWI81G0135 Tripterygium wilfordii HOM05D001747 ORTHO05D001696 2.8e-11 72.4 57 68.4
Actinidia03411 Actinidia chinensis HOM05D001747 ORTHO05D001696 3.7e-11 72.0 69 56.5
Ah.12g053840 Amaranthus hybridus HOM05D001747 ORTHO05D001696 3.7e-11 72.0 50 68.0
TWI60G1277 Tripterygium wilfordii HOM05D001747 ORTHO05D001696 3.7e-11 72.0 57 66.7
BcaC01g05737 Brassica carinata HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
BcaC02g07732 Brassica carinata HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
A03p19470 Brassica napus HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
A04p26750 Brassica napus HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
C03p22690 Brassica napus HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
C04p64150 Brassica napus HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
BolC3t14668H Brassica oleracea HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
BolC4t27898H Brassica oleracea HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
BraA03t11200Z Brassica rapa HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
BraA04t18179Z Brassica rapa HOM05D001747 ORTHO05D001696 4.8e-11 71.6 52 67.3
Lj2A252G53 Lonicera japonica HOM05D001747 ORTHO05D001696 6.3e-11 71.2 58 67.2
BcaB02g09470 Brassica carinata HOM05D001747 ORTHO05D001696 8.3e-11 70.9 52 67.3
A05p10560 Brassica napus HOM05D001747 ORTHO05D001696 8.3e-11 70.9 52 67.3
BolC4t22954H Brassica oleracea HOM05D001747 ORTHO05D001696 8.3e-11 70.9 52 67.3
BraA05t19994Z Brassica rapa HOM05D001747 ORTHO05D001696 8.3e-11 70.9 52 67.3
Cpa.g.sc76.5 Carica papaya HOM05D001747 ORTHO05D001696 8.3e-11 70.9 50 70.0
FAN04G1571 Fragaria x ananassa HOM05D001747 ORTHO05D001696 8.3e-11 70.9 49 65.3
Nn6g33726 Nelumbo nucifera HOM05D001747 ORTHO05D001696 8.3e-11 70.9 53 69.8
Sp4g17410 Schrenkiella parvula HOM05D001747 ORTHO05D001696 1.1e-10 70.5 52 67.3
MBI07_g07340_MAGBIO Magnolia biondii HOM05D001747 ORTHO05D001696 1.8e-10 69.7 65 56.9
Aa31LG9G15180 Aethionema arabicum HOM05D001747 ORTHO05D001696 5.4e-10 68.2 52 63.5
MBI04_g20747_MAGBIO Magnolia biondii HOM05D001747 ORTHO05D001696 5.4e-10 68.2 51 66.7
Nn1g00712 Nelumbo nucifera HOM05D001747 ORTHO05D001696 5.4e-10 68.2 51 70.6
QL93p0089_0059 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-10 68.2 89 43.8
QL93p0340_0006 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-10 68.2 89 43.8
THA.LOC104807934 Tarenaya hassleriana HOM05D000268 ORTHO05D000261 5.4e-10 68.2 78 50.0
Aqoxy2G00343 Aquilegia oxysepala HOM05D001747 ORTHO05D001696 1.2e-09 67.0 51 62.7
BcaC02g11589 Brassica carinata HOM05D001747 ORTHO05D001696 1.2e-09 67.0 52 65.4
C04p13640 Brassica napus HOM05D001747 ORTHO05D001696 1.2e-09 67.0 52 65.4
QL93p0012_0034 Quercus lobata HOM05D001747 ORTHO05D001696 1.2e-09 67.0 50 64.0
QL93p0012_0097 Quercus lobata HOM05D001747 ORTHO05D001696 1.6e-09 66.6 50 62.0
TAR636G1148 Trochodendron aralioides HOM05D001747 ORTHO05D001696 1.6e-09 66.6 44 72.7
ATR0681G176 Amborella trichopoda HOM05D001747 ORTHO05D001696 2.0e-09 66.2 66 53.0
CDE11G0529 Ceratophyllum demersum HOM05D001747 ORTHO05D001696 2.0e-09 66.2 80 46.2
Aqoxy3G02596 Aquilegia oxysepala HOM05D001747 ORTHO05D001696 4.5e-09 65.1 89 40.4
TAR628G0347 Trochodendron aralioides HOM05D001747 ORTHO05D001696 7.7e-09 64.3 46 71.7
Sabra01G0119200 Salix brachista HOM05D001747 ORTHO05D001696 1.3e-08 63.5 73 52.1
Zm00001eb272330 Zea mays HOM05D001747 ORTHO05D001696 1.3e-08 63.5 40 75.0
SEGI_05986 Sequoiadendron giganteum HOM05D001747 ORTHO05D001696 1.7e-08 63.2 53 60.4
TAR629G3352 Trochodendron aralioides HOM05D001747 ORTHO05D001696 5.0e-08 61.6 42 73.8
DCAR_008314 Daucus carota HOM05D001747 ORTHO05D001696 8.5e-08 60.8 50 58.0
TAR633G0176 Trochodendron aralioides HOM05D000118 ORTHO05D004476 8.5e-08 60.8 41 75.6
EL10Ac3g06261 Beta vulgaris HOM05D001747 ORTHO05D001696 3.2e-07 58.9 53 56.6
HPP92_025886 Vanilla planifolia HOM05D001747 ORTHO05D001696 3.2e-07 58.9 56 51.8
AUR62029979 Chenopodium quinoa HOM05D001747 ORTHO05D001696 5.5e-07 58.2 58 50.0
DCAR_004515 Daucus carota HOM05D001747 ORTHO05D001696 5.5e-07 58.2 43 60.5
arahy.Tifrunner.gnm1.ann1.TK66KG Arachis hypogaea HOM05D001747 ORTHO05D001696 7.2e-07 57.8 50 58.0
Sed0024737 Sechium edule HOM05D001747 ORTHO05D001696 1.2e-06 57.0 52 53.8
Ca_02361_v3 Cicer arietinum L. HOM05D001747 ORTHO05D001696 1.6e-06 56.6 53 52.8
PSO170G5953 Papaver somniferum HOM05D001747 ORTHO05D001696 1.6e-06 56.6 84 41.7
Hund12252 Selenicereus undatus HOM05D001747 ORTHO05D001696 1.6e-06 56.6 54 55.6
AUR62002559 Chenopodium quinoa HOM05D001747 ORTHO05D001696 2.7e-06 55.8 53 52.8
Nitab4.5_0000895g0240 Nicotiana tabacum HOM05D001747 ORTHO05D001696 2.7e-06 55.8 52 57.7
Nitab4.5_0004665g0070 Nicotiana tabacum HOM05D001747 ORTHO05D001696 2.7e-06 55.8 52 57.7
Solyc12g098950.2 Solanum lycopersicum HOM05D001747 ORTHO05D001696 2.7e-06 55.8 53 56.6
Sopen12g033700 Solanum pennellii HOM05D001747 ORTHO05D001696 2.7e-06 55.8 53 56.6
HPP92_010871 Vanilla planifolia HOM05D001747 ORTHO05D001696 2.7e-06 55.8 60 48.3
CDE02G0541 Ceratophyllum demersum HOM05D001747 ORTHO05D001696 3.6e-06 55.5 62 48.4
CAN.G484.89 Capsicum annuum HOM05D001747 ORTHO05D001696 4.7e-06 55.1 53 56.6
Oeu022703.1 Olea europaea HOM05D001747 ORTHO05D001696 4.7e-06 55.1 53 54.7
MELO3C021232.2 Cucumis melo HOM05D001747 ORTHO05D001696 6.1e-06 54.7 52 53.8
CsaV3_6G000220 Cucumis sativus L. HOM05D001747 ORTHO05D001696 6.1e-06 54.7 52 53.8
HPP92_025659 Vanilla planifolia HOM05D001747 ORTHO05D001696 6.1e-06 54.7 56 53.6
PSO210G7213 Papaver somniferum HOM05D001747 ORTHO05D001696 8.0e-06 54.3 53 52.8
PSO761G0403 Papaver somniferum HOM05D001747 ORTHO05D001696 8.0e-06 54.3 53 52.8
Peaxi162Scf00668g00311 Petunia axillaris HOM05D001747 ORTHO05D001696 8.0e-06 54.3 53 54.7
Sc13g0007720 Simmondsia chinensis HOM05D001747 ORTHO05D001696 8.0e-06 54.3 53 54.7


User provided reference genes

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