Gene: Solyc08g077550.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g077550.3
- Transcript Identifier Solyc08g077550.3.1
- Gene Type Coding gene
- Location SL4.0ch08 : 59636714-59643021 : positive
Gene Family Information
- ID HOM05D001747
- #Genes/#Species 371/100
- Phylogenetic origin
- ID ORTHO05D001696
- #Genes/#Species 369/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc08g077550.3.1
- uniprot A0A3Q7HSC5
- gene_id Solyc08g077550
Descriptions
- Description Novel plant snare, putative (AHRD V3.3 *** B9RUR4_RICCO)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000911 | ISO | PLAZA Integrative Orthology | cytokinesis by cell plate formation | AT2G35190 |
| GO:0045899 | IBA | GOA Database | positive regulation of RNA polymerase II transcription preinitiation complex assembly | |
| GO:0006890 | IEA | GOA Database | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0006890 | IEA | InterPro | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0061025 | IEA | GOA Database | membrane fusion |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005484 | IEA | GOA Database | SNAP receptor activity | |
| GO:0005484 | IEA | InterPro | SNAP receptor activity | |
| GO:0017025 | IBA | GOA Database | TBP-class protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G35190 |
| GO:0009504 | ISO | PLAZA Integrative Orthology | cell plate | AT2G35190 |
| GO:0008540 | IBA | GOA Database | proteasome regulatory particle, base subcomplex | |
| GO:0031595 | IBA | GOA Database | nuclear proteasome complex | |
| GO:0031597 | IBA | GOA Database | cytosolic proteasome complex | |
| GO:0031201 | IEA | GOA Database | SNARE complex | |
| GO:0031201 | IEA | InterPro | SNARE complex | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.4.2.3.2 | Cell cycle organisation.cytokinesis.cell-plate formation.SNARE cell-plate vesicle fusion complex.Qb-SNARE component NPSN11 |
| 22.3.5.1.2.4 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.NPSN-group component |