Gene: COL.COLO4_06698
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_06698
- Transcript Identifier COL.rna5513
- Gene Type Coding gene
- Location AWUE01012847.1 : 7274-10148 : positive
Gene Family Information
- ID HOM05D001747
- #Genes/#Species 371/100
- Phylogenetic origin
- ID ORTHO05D001696
- #Genes/#Species 369/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna5513
- GenBank OMP08191.1
- id gene6670
- gene_name COLO4_06698
- uniprot A0A1R3KM92
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061025 | IEA | GOA Database | membrane fusion | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006890 | IEA | GOA Database | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0006890 | IEA | InterPro | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0000911 | ISO | PLAZA Integrative Orthology | cytokinesis by cell plate formation | AT2G35190 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005484 | IEA | GOA Database | SNAP receptor activity | |
| GO:0005484 | IEA | InterPro | SNAP receptor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0031201 | IEA | GOA Database | SNARE complex | |
| GO:0031201 | IEA | InterPro | SNARE complex | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G48240 |
| GO:0009504 | ISO | PLAZA Integrative Orthology | cell plate | AT2G35190 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G48240 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.4.2.3.2 | Cell cycle organisation.cytokinesis.cell-plate formation.SNARE cell-plate vesicle fusion complex.Qb-SNARE component NPSN11 |
| 22.3.5.1.2.4 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.NPSN-group component |