Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047328.1 Olea europaea HOM05D005111 ORTHO05D006650 6.5e-102 374.0 183 100.0
Dinv35035 Davidia involucrata HOM05D005111 ORTHO05D006650 1.3e-86 323.2 182 84.1
ECA246G3776 Erigeron canadensis HOM05D005111 ORTHO05D006650 8.6e-86 320.5 182 83.5
Peaxi162Scf00036g00163 Petunia axillaris HOM05D005111 ORTHO05D006650 8.6e-86 320.5 182 85.2
Actinidia28460 Actinidia chinensis HOM05D005111 ORTHO05D006650 1.1e-85 320.1 182 84.1
Actinidia36066 Actinidia chinensis HOM05D005111 ORTHO05D006650 1.1e-85 320.1 182 84.1
Lsat_1_v5_gn_8_69941 Lactuca sativa HOM05D005111 ORTHO05D006650 1.1e-85 320.1 182 83.0
CSS0013590 Camellia sinensis var. sinensis HOM05D005111 ORTHO05D006650 1.5e-85 319.7 182 84.6
Hma1.2p1_0697F.1_g204930 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 1.9e-85 319.3 182 82.4
Nitab4.5_0000632g0170 Nicotiana tabacum HOM05D005111 ORTHO05D006650 2.5e-85 318.9 182 83.0
GSVIVG01032518001 Vitis vinifera HOM05D005111 ORTHO05D006650 3.3e-85 318.5 182 83.0
CAN.G809.38 Capsicum annuum HOM05D005111 ORTHO05D006650 7.2e-85 317.4 182 84.1
Lj7P412T18 Lonicera japonica HOM05D005111 ORTHO05D006650 9.5e-85 317.0 182 83.5
Nitab4.5_0000844g0360 Nicotiana tabacum HOM05D005111 ORTHO05D006650 9.5e-85 317.0 182 82.4
Solyc02g081950.4 Solanum lycopersicum HOM05D005111 ORTHO05D006650 9.5e-85 317.0 182 83.0
Sopen02g026580 Solanum pennellii HOM05D005111 ORTHO05D006650 1.2e-84 316.6 182 82.4
PGSC0003DMG400007321 Solanum tuberosum HOM05D005111 ORTHO05D006650 1.2e-84 316.6 182 83.0
HanXRQChr15g0474461 Helianthus annuus HOM05D005111 ORTHO05D006650 1.6e-84 316.2 181 82.3
Dinv33518 Davidia involucrata HOM05D005111 ORTHO05D006650 2.1e-84 315.8 182 83.5
SalBow1G6258 Salvia bowleyana HOM05D005111 ORTHO05D006650 6.8e-83 310.8 177 83.1
Cc07_g02510 Coffea canephora HOM05D005111 ORTHO05D006650 8.9e-83 310.5 178 82.0
TWI56G1475 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 8.9e-83 310.5 182 79.7
CiPaw.04G023100 Carya illinoinensis HOM05D005111 ORTHO05D006650 1.5e-82 309.7 182 81.3
Cfa007459 Carpinus fangiana HOM05D005111 ORTHO05D006650 7.5e-82 307.4 182 79.1
AUR62032092 Chenopodium quinoa HOM05D005111 ORTHO05D006650 7.5e-82 307.4 182 78.6
Rhsim08G0056700 Rhododendron simsii HOM05D005111 ORTHO05D006650 1.7e-81 306.2 182 79.7
MSTRG.3306 Avicennia marina HOM05D005111 ORTHO05D006650 2.8e-81 305.4 178 81.5
Migut.H00147 Erythranthe guttata HOM05D005111 ORTHO05D006650 4.9e-81 304.7 178 80.9
MD17G1038600 Malus domestica HOM05D005111 ORTHO05D006650 4.9e-81 304.7 182 78.0
TWI36G0044 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 4.9e-81 304.7 182 79.1
MSTRG.15504 Avicennia marina HOM05D005111 ORTHO05D006650 6.3e-81 304.3 178 80.3
MD09G1037200 Malus domestica HOM05D005111 ORTHO05D006650 1.4e-80 303.1 182 78.0
DCAR_013972 Daucus carota HOM05D005111 ORTHO05D006650 1.8e-80 302.8 182 78.6
Prupe.3G280400 Prunus persica HOM05D005111 ORTHO05D006650 2.4e-80 302.4 182 77.5
RcHm_v2.0_Chr2g0170641 Rosa chinensis HOM05D005111 ORTHO05D006650 4.1e-80 301.6 182 78.6
Haze_14637 Corylus avellana HOM05D005111 ORTHO05D006650 7.0e-80 300.8 178 79.8
Nitab4.5_0000389g0080 Nicotiana tabacum HOM05D005111 ORTHO05D006650 7.0e-80 300.8 182 80.2
Nn3g16957 Nelumbo nucifera HOM05D005111 ORTHO05D006650 2.0e-79 299.3 182 76.4
CiPaw.03G035600 Carya illinoinensis HOM05D005111 ORTHO05D006650 2.7e-79 298.9 182 76.9
Ah.16g106920 Amaranthus hybridus HOM05D005111 ORTHO05D006650 3.5e-79 298.5 182 75.3
FAN09G2278 Fragaria x ananassa HOM05D005111 ORTHO05D006650 3.5e-79 298.5 182 77.5
TAR622G0537 Trochodendron aralioides HOM05D005111 ORTHO05D006650 3.5e-79 298.5 182 76.9
Potri.001G350300 Populus trichocarpa HOM05D005111 ORTHO05D006650 4.5e-79 298.1 179 77.7
FAN02G1641 Fragaria x ananassa HOM05D005111 ORTHO05D006650 5.9e-79 297.7 182 76.9
PGR083G2413 Punica granatum HOM05D005111 ORTHO05D006650 5.9e-79 297.7 183 77.6
CANSAT64G0323 Cannabis sativa HOM05D005111 ORTHO05D006650 7.8e-79 297.4 182 76.4
FAN05G4920 Fragaria x ananassa HOM05D005111 ORTHO05D006650 7.8e-79 297.4 182 76.9
Nitab4.5_0000005g0410 Nicotiana tabacum HOM05D005111 ORTHO05D006650 7.8e-79 297.4 182 79.1
TAR374G1688 Trochodendron aralioides HOM05D005111 ORTHO05D006650 7.8e-79 297.4 182 76.4
Nn4g22869 Nelumbo nucifera HOM05D005111 ORTHO05D006650 1.0e-78 297.0 182 75.8
ClCG09G018710 Citrullus lanatus HOM05D005111 ORTHO05D006650 1.3e-78 296.6 182 76.4
ClCG09G018770 Citrullus lanatus HOM05D005111 ORTHO05D006650 1.3e-78 296.6 182 76.4
Gohir.D09G024300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.3e-78 296.6 182 76.4
Gorai.006G028500 Gossypium raimondii HOM05D005111 ORTHO05D006650 1.7e-78 296.2 182 75.8
SGA_v2.0_scaffold205G41716 Striga asiatica HOM05D005111 ORTHO05D006650 1.7e-78 296.2 178 77.5
Manes.15G180000 Manihot esculenta HOM05D005111 ORTHO05D006650 2.9e-78 295.4 182 77.5
EL10Ac2g03364 Beta vulgaris HOM05D005111 ORTHO05D006650 3.8e-78 295.0 178 78.1
Manes.17G124400 Manihot esculenta HOM05D005111 ORTHO05D006650 6.6e-78 294.3 182 76.9
COL.COLO4_32007 Corchorus olitorius HOM05D005111 ORTHO05D006650 1.1e-77 293.5 182 76.4
QL02p077635 Quercus lobata HOM05D005111 ORTHO05D006650 1.1e-77 293.5 182 75.8
Sabra16G0229800 Salix brachista HOM05D005111 ORTHO05D006650 1.1e-77 293.5 179 76.5
MELO3C021519.2 Cucumis melo HOM05D005111 ORTHO05D006650 1.5e-77 293.1 182 75.8
CsaV3_5G037360 Cucumis sativus L. HOM05D005111 ORTHO05D006650 1.5e-77 293.1 182 75.8
Sed0025070 Sechium edule HOM05D005111 ORTHO05D006650 1.5e-77 293.1 182 75.3
Hma1.2p1_2931F.1_g330500 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 1.9e-77 292.7 182 75.3
Sed0001363 Sechium edule HOM05D005111 ORTHO05D006650 3.3e-77 292.0 182 75.8
Hma1.2p1_0967F.1_g242385 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 5.6e-77 291.2 182 75.3
Ciclev10016872m.g Citrus clementina HOM05D005111 ORTHO05D006650 7.3e-77 290.8 182 76.9
Gohir.D10G087701 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.2e-76 290.0 182 73.1
Gorai.011G096000 Gossypium raimondii HOM05D005111 ORTHO05D006650 1.2e-76 290.0 182 73.1
unitig_744.g24353 Utricularia gibba HOM05D005111 ORTHO05D006650 1.6e-76 289.7 179 74.9
Duzib147G1596 Durio zibethinus HOM05D005111 ORTHO05D006650 2.8e-76 288.9 182 74.2
FvH4_6g50340 Fragaria vesca HOM05D005111 ORTHO05D006650 2.8e-76 288.9 177 77.4
FAN14G5899 Fragaria x ananassa HOM05D005111 ORTHO05D006650 2.8e-76 288.9 177 77.4
Gohir.A10G101300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 4.7e-76 288.1 182 73.6
Thecc.04G004900 Theobroma cacao HOM05D005111 ORTHO05D006650 6.1e-76 287.7 182 75.3
Atru.chr6.2171 Acer truncatum HOM05D005111 ORTHO05D006650 3.0e-75 285.4 182 74.7
Duzib264G0177 Durio zibethinus HOM05D005111 ORTHO05D006650 4.0e-75 285.0 182 74.2
SalBow7G0796 Salvia bowleyana HOM05D005111 ORTHO05D006650 4.0e-75 285.0 177 76.3
Gohir.D04G053100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 8.9e-75 283.9 182 72.5
Gorai.012G059600 Gossypium raimondii HOM05D005111 ORTHO05D006650 8.9e-75 283.9 182 72.5
Gohir.A05G361100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.2e-74 283.5 182 72.5
Aa31LG2G4740 Aethionema arabicum HOM05D005111 ORTHO05D006650 2.0e-74 282.7 182 72.0
Sp2g17070 Schrenkiella parvula HOM05D005111 ORTHO05D006650 3.4e-74 282.0 182 72.0
Potri.017G073800 Populus trichocarpa HOM05D005111 ORTHO05D006650 4.4e-74 281.6 183 73.8
SGA_v2.0_scaffold30G12485 Striga asiatica HOM05D005111 ORTHO05D006650 4.4e-74 281.6 178 71.9
Aqoxy3G00932 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 5.8e-74 281.2 181 71.8
Migut.K01364 Erythranthe guttata HOM05D005111 ORTHO05D006650 9.8e-74 280.4 179 74.3
SEGI_23218 Sequoiadendron giganteum HOM05D005111 ORTHO05D006650 1.3e-73 280.0 182 72.0
THA.LOC104823919 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 2.2e-73 279.3 182 72.5
CDE10G0493 Ceratophyllum demersum HOM05D005111 ORTHO05D006650 8.3e-73 277.3 182 70.9
Eucgr.J02178 Eucalyptus grandis HOM05D005111 ORTHO05D006650 1.8e-72 276.2 182 69.8
Thhalv10005667m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 4.1e-72 275.0 182 70.3
AL7G49820 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 5.4e-72 274.6 182 68.7
BcaC06g33750 Brassica carinata HOM05D005111 ORTHO05D006650 7.0e-72 274.2 183 69.9
C07p37330 Brassica napus HOM05D005111 ORTHO05D006650 7.0e-72 274.2 183 69.9
BolC7t44243H Brassica oleracea HOM05D005111 ORTHO05D006650 7.0e-72 274.2 183 69.9
A06p40670 Brassica napus HOM05D005111 ORTHO05D006650 9.2e-72 273.9 183 69.9
BraA06t26987Z Brassica rapa HOM05D005111 ORTHO05D006650 9.2e-72 273.9 183 69.9
CDE10G0889 Ceratophyllum demersum HOM05D004213 ORTHO05D005091 9.2e-72 273.9 177 72.3
PSO478G1103 Papaver somniferum HOM05D005111 ORTHO05D006650 1.2e-71 273.5 182 72.5
AT5G40190 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 1.6e-71 273.1 182 68.1
PSO017G5141 Papaver somniferum HOM05D005111 ORTHO05D006650 7.8e-71 270.8 182 72.5
Thhalv10027951m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 2.3e-70 269.2 180 68.9
AL5G17640 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 3.9e-70 268.5 181 69.1
CiPaw.06G158200 Carya illinoinensis HOM05D005111 ORTHO05D006650 3.9e-70 268.5 182 68.7
THA.LOC104805409 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 3.9e-70 268.5 179 69.8
Carub.0007s3546 Capsella rubella HOM05D005111 ORTHO05D006650 6.6e-70 267.7 182 67.0
CARHR261950 Cardamine hirsuta HOM05D005111 ORTHO05D006650 1.9e-69 266.2 182 67.0
Sc20g0002810 Simmondsia chinensis HOM05D005111 ORTHO05D006650 1.9e-69 266.2 170 74.7
BcaC06g30932 Brassica carinata HOM05D005111 ORTHO05D006650 3.3e-69 265.4 191 67.0
VMungo0464G0112 Vigna mungo HOM05D005111 ORTHO05D006650 7.3e-69 264.2 183 67.2
Glyma.19G011900 Glycine max HOM05D005111 ORTHO05D006650 2.1e-68 262.7 185 66.5
VMungo0464G1864 Vigna mungo HOM05D005111 ORTHO05D006650 2.8e-68 262.3 183 66.7
Glyma.19G012000 Glycine max HOM05D005111 ORTHO05D006650 3.6e-68 261.9 184 66.8
Lj2g0005029 Lotus japonicus HOM05D005111 ORTHO05D006650 8.0e-68 260.8 178 66.3
Phvul.004G019100 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 1.1e-67 260.4 183 65.6
Carub.0005s0666 Capsella rubella HOM05D005111 ORTHO05D006650 2.3e-67 259.2 177 68.9
Aqoxy3G03068 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 2.0e-66 256.1 182 67.6
Glyma.13G070800 Glycine max HOM05D005111 ORTHO05D006650 3.4e-66 255.4 180 65.6
Phvul.004G019200 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 5.8e-66 254.6 183 64.5
Actinidia33968 Actinidia chinensis HOM05D005111 ORTHO05D000390 2.2e-65 252.7 182 66.5
AT3G28140 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 6.4e-65 251.1 183 66.1
arahy.Tifrunner.gnm1.ann1.68QD6J Arachis hypogaea HOM05D005111 ORTHO05D006650 4.1e-64 248.4 177 68.4
Ca_04214_v3 Cicer arietinum L. HOM05D005111 ORTHO05D006650 1.3e-62 243.4 178 64.6
TPR.G2260 Trifolium pratense HOM05D005111 ORTHO05D006650 5.0e-62 241.5 180 63.9
Psat1g060720 Pisum sativum HOM05D005111 ORTHO05D006650 5.6e-61 238.0 177 65.0
Sp7g01780 Schrenkiella parvula HOM05D005111 ORTHO05D006650 4.4e-58 228.4 179 62.6
Lalb_Chr02g0159721 Lupinus albus HOM05D005111 ORTHO05D006650 4.9e-57 224.9 186 57.5
ATR1149G112 Amborella trichopoda HOM05D005111 ORTHO05D006650 2.1e-55 219.5 180 60.6
Medtr6g007773 Medicago truncatula HOM05D005111 ORTHO05D006650 1.7e-54 216.5 179 59.2
BcaC06g30930 Brassica carinata HOM05D005111 ORTHO05D006650 8.6e-54 214.2 183 59.0
Cpa.g.sc286.5 Carica papaya HOM05D005111 ORTHO05D006650 2.0e-50 203.0 163 61.3
Gohir.A09G025000 Gossypium hirsutum HOM05D005111 ORTHO05D006650 4.1e-48 195.3 117 76.9
Os09g0375400 Oryza sativa ssp. japonica HOM05D005111 ORTHO05D006650 3.9e-46 188.7 184 54.3
Ah.07g198430 Amaranthus hybridus HOM05D005111 ORTHO05D003582 6.9e-43 177.9 159 54.7
FAN09G1763 Fragaria x ananassa HOM05D005111 ORTHO05D006650 4.4e-42 175.3 115 68.7
Zm00001eb098850 Zea mays HOM05D005111 ORTHO05D006650 5.8e-42 174.9 197 47.7
SMO367G0111 Selaginella moellendorffii HOM05D005111 ORTHO05D006650 1.7e-38 163.3 179 42.5
Actinidia27813 Actinidia chinensis HOM05D005111 ORTHO05D006650 1.1e-29 134.0 134 55.2
Nn8g40738 Nelumbo nucifera HOM05D005111 ORTHO05D006650 2.6e-26 122.9 76 77.6
CARHR149780 Cardamine hirsuta HOM05D005111 ORTHO05D006650 3.2e-24 115.9 99 55.6
Ciclev10033710m.g Citrus clementina HOM05D005111 ORTHO05D152558 2.8e-20 102.8 164 34.1
BcaC03g17502 Brassica carinata HOM05D005111 ORTHO05D039329 1.3e-12 77.4 52 65.4
BraA02t08578Z Brassica rapa HOM05D000028 ORTHO05D000390 8.2e-12 74.7 59 57.6
A02p35780 Brassica napus HOM05D005111 ORTHO05D006650 1.8e-11 73.6 55 60.0
BcaC06g33752 Brassica carinata HOM05D005111 ORTHO05D093848 3.2e-08 62.8 41 65.9


User provided reference genes

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