Gene: AT3G28140

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G28140
  • Transcript Identifier AT3G28140.1
  • Gene Type Coding gene
  • Location Chr3 : 10470552-10471106 : positive

Gene Family Information

  • ID HOM05D005111
  • #Genes/#Species 147/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G28140.1
  • uniprot Q9LRS3

Descriptions

  • Description RNA ligase/cyclic nucleotide phosphodiesterase family protein
  • Computational description RNA ligase/cyclic nucleotide phosphodiesterase family protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: RNA metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097); BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT5G40190.1); Has 114 Blast hits to 114 proteins in 51 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016874
IEA
GOA Databaseligase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009097 Cyclic phosphodiesterase
Mapman id Description
35.1 not assigned.annotated