Gene: AT5G40190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G40190
  • Transcript Identifier AT5G40190.1
  • Gene Type Coding gene
  • Location Chr5 : 16069298-16069849 : negative

Gene Family Information

  • ID HOM05D005111
  • #Genes/#Species 147/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G40190.1
  • uniprot Q9FL13

Descriptions

  • Description RNA ligase/cyclic nucleotide phosphodiesterase family protein
  • Computational description RNA ligase/cyclic nucleotide phosphodiesterase family protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: RNA metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097); BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT3G28140.1); Has 227 Blast hits to 227 proteins in 109 species: Archae - 0; Bacteria - 185; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005516
IPI
TAS
Gene Ontologycalmodulin binding1
GO:0016874
IEA
GOA Databaseligase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009097 Cyclic phosphodiesterase
Mapman id Description
35.1 not assigned.annotated