Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047310.1 Olea europaea HOM05D004573 ORTHO05D005764 0.0e+00 1409.8 721 100.0
Migut.F01444 Erythranthe guttata HOM05D004573 ORTHO05D005764 3.0e-182 642.9 768 51.6
MSTRG.284 Avicennia marina HOM05D004573 ORTHO05D005764 6.4e-177 625.2 755 50.5
Dinv26026 Davidia involucrata HOM05D004573 ORTHO05D005764 6.4e-177 625.2 796 50.5
CSS0014274 Camellia sinensis var. sinensis HOM05D004573 ORTHO05D005764 3.3e-165 586.3 718 51.9
Peaxi162Scf00658g00843 Petunia axillaris HOM05D004573 ORTHO05D005764 2.4e-160 570.1 771 45.7
SGA_v2.0_scaffold2G00997 Striga asiatica HOM05D004573 ORTHO05D005764 2.1e-159 567.0 787 46.8
Cc02_g07730 Coffea canephora HOM05D004573 ORTHO05D005764 1.7e-158 563.9 768 46.6
TAR623G0262 Trochodendron aralioides HOM05D004573 ORTHO05D005764 1.7e-158 563.9 760 46.6
Actinidia13882 Actinidia chinensis HOM05D004573 ORTHO05D005764 8.7e-158 561.6 765 47.7
Solyc06g043030.4 Solanum lycopersicum HOM05D004573 ORTHO05D005764 2.5e-157 560.1 764 46.6
Sopen06g013510 Solanum pennellii HOM05D004573 ORTHO05D005764 2.5e-157 560.1 764 46.6
CAN.G55.6 Capsicum annuum HOM05D004573 ORTHO05D005764 1.4e-155 554.3 762 46.6
GSVIVG01016531001 Vitis vinifera HOM05D004573 ORTHO05D005764 2.4e-155 553.5 765 46.9
vmacro10228 Vaccinium macrocarpon HOM05D004573 ORTHO05D005764 1.4e-152 544.3 775 46.6
QL08p059630 Quercus lobata HOM05D004573 ORTHO05D005764 4.2e-152 542.7 774 46.3
Prupe.2G236800 Prunus persica HOM05D004573 ORTHO05D005764 3.9e-150 536.2 784 45.0
Rhsim09G0166500 Rhododendron simsii HOM05D004573 ORTHO05D005764 4.8e-148 529.3 765 46.5
Haze_17077 Corylus avellana HOM05D004573 ORTHO05D005764 1.2e-146 524.6 768 44.8
PGR044G2694 Punica granatum HOM05D004573 ORTHO05D005764 4.5e-146 522.7 767 44.5
CiPaw.01G288400 Carya illinoinensis HOM05D004573 ORTHO05D005764 1.7e-145 520.8 776 44.5
Nitab4.5_0000897g0020 Nicotiana tabacum HOM05D004573 ORTHO05D005764 2.2e-145 520.4 779 43.9
Cfa001465 Carpinus fangiana HOM05D004573 ORTHO05D005764 4.9e-145 519.2 778 45.2
Thecc.10G040400 Theobroma cacao HOM05D004573 ORTHO05D005764 4.2e-144 516.2 766 45.2
Actinidia29230 Actinidia chinensis HOM05D004573 ORTHO05D005764 7.1e-144 515.4 761 46.0
Ca_05890_v3 Cicer arietinum L. HOM05D004573 ORTHO05D005764 2.8e-140 503.4 767 44.6
MD01G1135400 Malus domestica HOM05D004573 ORTHO05D005764 1.1e-139 501.5 782 43.5
Glyma.14G068200 Glycine max HOM05D004573 ORTHO05D005764 1.8e-139 500.7 771 43.8
RcHm_v2.0_Chr1g0367761 Rosa chinensis HOM05D004573 ORTHO05D005764 9.0e-139 498.4 757 43.2
Glyma.02G248300 Glycine max HOM05D004573 ORTHO05D005764 1.2e-138 498.0 772 44.0
FAN06G2378 Fragaria x ananassa HOM05D004573 ORTHO05D005764 2.6e-138 496.9 760 43.7
Ciclev10030556m.g Citrus clementina HOM05D004573 ORTHO05D005764 4.5e-138 496.1 765 43.9
MELO3C023865.2 Cucumis melo HOM05D004573 ORTHO05D005764 7.6e-138 495.4 749 43.7
Duzib114G0300 Durio zibethinus HOM05D004573 ORTHO05D005764 7.6e-138 495.4 712 46.1
Potri.010G202800 Populus trichocarpa HOM05D004573 ORTHO05D005764 1.0e-137 495.0 770 43.5
TWI38G0403 Tripterygium wilfordii HOM05D004573 ORTHO05D005764 1.7e-137 494.2 769 43.3
Eucgr.J00002 Eucalyptus grandis HOM05D004573 ORTHO05D005764 2.9e-137 493.4 757 43.2
PSO384G3826 Papaver somniferum HOM05D004573 ORTHO05D005764 5.0e-137 492.7 751 42.6
ClCG07G003410 Citrullus lanatus HOM05D004573 ORTHO05D005764 6.5e-137 492.3 799 42.2
Sabra10G0156500 Salix brachista HOM05D004573 ORTHO05D005764 8.5e-137 491.9 758 43.8
Lalb_Chr04g0251191 Lupinus albus HOM05D004573 ORTHO05D005764 1.1e-136 491.5 770 42.1
Psat2g041280 Pisum sativum HOM05D004573 ORTHO05D005764 1.1e-136 491.5 765 43.8
CsaV3_5G008150 Cucumis sativus L. HOM05D004573 ORTHO05D005764 3.2e-136 490.0 762 43.3
PSO339G0476 Papaver somniferum HOM05D004573 ORTHO05D005764 4.2e-136 489.6 751 43.0
Gohir.D05G301500 Gossypium hirsutum HOM05D004573 ORTHO05D005764 7.2e-136 488.8 764 43.3
FAN03G1996 Fragaria x ananassa HOM05D004573 ORTHO05D005764 2.1e-135 487.3 767 43.4
FAN03G2998 Fragaria x ananassa HOM05D004573 ORTHO05D005764 2.1e-135 487.3 767 43.4
Medtr5g079920 Medicago truncatula HOM05D004573 ORTHO05D005764 1.3e-134 484.6 768 43.0
Sed0007030 Sechium edule HOM05D004573 ORTHO05D005764 1.3e-134 484.6 756 42.6
TWI63G1141 Tripterygium wilfordii HOM05D004573 ORTHO05D005764 1.8e-134 484.2 775 42.2
Gohir.A05G301800 Gossypium hirsutum HOM05D004573 ORTHO05D005764 6.7e-134 482.3 763 42.7
Manes.04G070300 Manihot esculenta HOM05D004573 ORTHO05D005764 8.7e-134 481.9 765 43.0
CANSAT11G1219 Cannabis sativa HOM05D004573 ORTHO05D005764 3.3e-133 479.9 782 43.7
AUR62012098 Chenopodium quinoa HOM05D004573 ORTHO05D005764 4.3e-133 479.6 774 41.2
Gorai.009G319600 Gossypium raimondii HOM05D004573 ORTHO05D005764 4.3e-133 479.6 764 43.2
Sc10g0001660 Simmondsia chinensis HOM05D004573 ORTHO05D005764 2.8e-132 476.9 770 42.3
FAN10G1883 Fragaria x ananassa HOM05D004573 ORTHO05D005764 4.8e-132 476.1 766 43.1
LjContig00141g0003376 Lotus japonicus HOM05D004573 ORTHO05D005764 7.7e-130 468.8 769 42.8
ECA233G3287 Erigeron canadensis HOM05D004573 ORTHO05D005764 1.3e-129 468.0 776 44.1
FAN01G0989 Fragaria x ananassa HOM05D004573 ORTHO05D005764 1.3e-129 468.0 759 41.9
Phvul.008G232400 Phaseolus vulgaris HOM05D004573 ORTHO05D005764 1.3e-129 468.0 761 42.3
FvH4_7g22680 Fragaria vesca HOM05D004573 ORTHO05D005764 3.8e-129 466.5 759 41.9
FAN01G2561 Fragaria x ananassa HOM05D004573 ORTHO05D005764 8.5e-129 465.3 759 41.8
FAN06G1159 Fragaria x ananassa HOM05D004573 ORTHO05D005764 1.1e-128 464.9 759 41.8
arahy.Tifrunner.gnm1.ann1.3B46PQ Arachis hypogaea HOM05D004573 ORTHO05D005764 4.6e-127 459.5 783 41.4
arahy.Tifrunner.gnm1.ann1.T39EX2 Arachis hypogaea HOM05D004573 ORTHO05D005764 4.6e-127 459.5 783 41.5
VMungo0647G0005 Vigna mungo HOM05D004573 ORTHO05D005764 3.0e-126 456.8 759 41.4
TPR.G3490 Trifolium pratense HOM05D004573 ORTHO05D005764 6.7e-126 455.7 761 41.8
THA.LOC104808042 Tarenaya hassleriana HOM05D004573 ORTHO05D005764 2.4e-123 447.2 773 41.0
Nn2g11126 Nelumbo nucifera HOM05D004573 ORTHO05D005764 6.9e-123 445.7 781 40.1
DCAR_027609 Daucus carota HOM05D004573 ORTHO05D005764 4.5e-122 443.0 840 38.8
AUR62039368 Chenopodium quinoa HOM05D004573 ORTHO05D005764 1.0e-121 441.8 742 39.6
HanXRQChr08g0220781 Helianthus annuus HOM05D004573 ORTHO05D005764 1.0e-121 441.8 774 41.3
Lsat_1_v5_gn_8_15420 Lactuca sativa HOM05D004573 ORTHO05D005764 1.0e-121 441.8 762 42.0
Gohir.A05G349133 Gossypium hirsutum HOM05D004573 ORTHO05D005764 2.2e-121 440.7 741 43.5
Ah.16g102370 Amaranthus hybridus HOM05D004573 ORTHO05D005764 2.9e-121 440.3 764 39.8
EL10Ac2g04737 Beta vulgaris HOM05D004573 ORTHO05D005764 6.5e-121 439.1 767 39.4
CARHR165530 Cardamine hirsuta HOM05D004573 ORTHO05D005764 7.9e-119 432.2 764 40.6
Aqoxy4G02884 Aquilegia oxysepala HOM05D004573 ORTHO05D005764 3.0e-118 430.3 762 39.4
C08p30730 Brassica napus HOM05D004573 ORTHO05D005764 3.9e-118 429.9 758 40.1
Hund13770 Selenicereus undatus HOM05D004573 ORTHO05D005764 5.2e-118 429.5 723 40.0
BolC8t50690H Brassica oleracea HOM05D004573 ORTHO05D005764 1.5e-117 427.9 758 39.8
BcaC07g39867 Brassica carinata HOM05D004573 ORTHO05D005764 3.3e-117 426.8 758 39.7
Carub.0005s2220 Capsella rubella HOM05D004573 ORTHO05D005764 3.3e-117 426.8 778 38.9
BcaB01g00096 Brassica carinata HOM05D004573 ORTHO05D005764 5.7e-117 426.0 767 39.5
A09p48420 Brassica napus HOM05D004573 ORTHO05D005764 9.7e-117 425.2 758 40.4
BraA09t40294Z Brassica rapa HOM05D004573 ORTHO05D005764 9.7e-117 425.2 758 40.4
Sp5g06990 Schrenkiella parvula HOM05D004573 ORTHO05D005764 2.8e-116 423.7 770 39.1
MBI14_g37190_MAGBIO Magnolia biondii HOM05D004573 ORTHO05D005764 6.3e-116 422.5 772 39.5
Thhalv10010081m.g Eutrema salsugineum HOM05D004573 ORTHO05D005764 5.9e-114 416.0 761 39.0
MD07G1200100 Malus domestica HOM05D004573 ORTHO05D005764 5.5e-112 409.5 775 39.7
AL5G36630 Arabidopsis lyrata HOM05D004573 ORTHO05D005764 1.4e-110 404.8 769 39.4
AT3G55480 Arabidopsis thaliana HOM05D004573 ORTHO05D005764 3.7e-108 396.7 770 38.2
Aa31LG10G10520 Aethionema arabicum HOM05D004573 ORTHO05D005764 1.1e-104 385.2 762 36.2
unitig_21.g20296 Utricularia gibba HOM05D004573 ORTHO05D005764 1.9e-104 384.4 684 41.2
CDE04G1394 Ceratophyllum demersum HOM05D004573 ORTHO05D005764 8.8e-102 375.6 726 37.5
ATR0559G310 Amborella trichopoda HOM05D004573 ORTHO05D005764 1.1e-99 368.6 772 37.3
PGSC0003DMG400029682 Solanum tuberosum HOM05D004573 ORTHO05D005764 6.1e-87 326.2 340 53.8
Nitab4.5_0000005g0500 Nicotiana tabacum HOM05D004573 ORTHO05D005764 1.5e-85 321.6 342 52.6
Zm00001eb260950 Zea mays HOM05D004573 ORTHO05D005764 2.6e-85 320.9 771 34.8
CSS0013300 Camellia sinensis var. sinensis HOM05D004573 ORTHO05D005764 3.3e-80 303.9 217 73.7
SalBow3G0200 Salvia bowleyana HOM05D004573 ORTHO05D005764 3.1e-78 297.4 613 37.7
Lj8C83T9 Lonicera japonica HOM05D004573 ORTHO05D005764 3.4e-77 293.9 342 50.9
Os01g0973300 Oryza sativa ssp. japonica HOM05D004573 ORTHO05D005764 1.1e-75 288.9 784 32.4
Lj8C83G8 Lonicera japonica HOM05D004573 ORTHO05D005764 5.4e-75 286.6 213 67.6
Nitab4.5_0000005g0510 Nicotiana tabacum HOM05D004573 ORTHO05D005764 9.2e-75 285.8 215 69.8
Cpa.g.c39208 Carica papaya HOM05D004573 ORTHO05D005764 3.5e-74 283.9 341 49.9
Atru.chr12.431 Acer truncatum HOM05D004573 ORTHO05D005764 1.7e-73 281.6 464 42.7
COL.COLO4_15058 Corchorus olitorius HOM05D004573 ORTHO05D005764 4.9e-68 263.5 343 45.8
Cpa.g.sc1.417 Carica papaya HOM05D004573 ORTHO05D005764 1.4e-67 261.9 214 64.5
MBI14_g45259_MAGBIO Magnolia biondii HOM05D004573 ORTHO05D005764 2.9e-60 237.7 211 59.7
SHI22762 Sapria himalayana HOM05D004573 ORTHO05D000023 9.3e-51 206.1 209 53.1
HPP92_001680 Vanilla planifolia HOM05D004573 ORTHO05D005764 5.1e-49 200.3 221 50.2
SEGI_34241 Sequoiadendron giganteum HOM05D004573 ORTHO05D005764 2.8e-47 194.5 213 50.7
Gorai.012G070900 Gossypium raimondii HOM05D004573 ORTHO05D005764 5.8e-45 186.8 352 38.6
Mapoly0053s0031 Marchantia polymorpha HOM05D004573 ORTHO05D005764 9.9e-45 186.0 882 27.0
AagrBONN_evm.TU.Sc2ySwM_228.842 Anthoceros agrestis HOM05D004573 ORTHO05D005764 1.4e-43 182.2 908 26.3
Pp3c8_13030 Physcomitrium patens HOM05D004573 ORTHO05D005764 5.5e-35 153.7 861 25.2
Pp3c8_13033 Physcomitrium patens HOM05D004573 ORTHO05D005764 5.5e-35 153.7 861 25.2
SMO230G0031 Selaginella moellendorffii HOM05D004573 ORTHO05D005764 3.5e-34 151.0 754 27.2
SHI22769 Sapria himalayana HOM05D004573 ORTHO05D005764 1.1e-32 146.0 334 33.8
SMO230G0053 Selaginella moellendorffii HOM05D004573 ORTHO05D005764 2.1e-26 125.2 460 27.4
CBR_g798 Chara braunii HOM05D004573 ORTHO05D005764 1.4e-22 112.5 285 30.9
CARHR159380 Cardamine hirsuta HOM05D004573 ORTHO05D005764 3.6e-18 97.8 57 87.7
MCO02G444 Micromonas commoda HOM05D004573 ORTHO05D005764 1.4e-14 85.9 269 24.9
PRCOL_00005543 Prasinoderma coloniale HOM05D004573 ORTHO05D005764 2.5e-11 75.1 679 20.9
SEGI_25143 Sequoiadendron giganteum HOM05D004573 ORTHO05D005764 3.3e-08 64.7 173 32.4
Cfa025571 Carpinus fangiana HOM05D004573 ORTHO05D043756 1.7e-07 62.4 221 23.5


User provided reference genes

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