Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047005.1 Olea europaea HOM05D003523 ORTHO05D004493 6.6e-287 989.9 478 100.0
Oeu038218.1 Olea europaea HOM05D003523 ORTHO05D004493 1.9e-60 237.7 252 53.6
Hma1.2p1_0126F.1_g059210 Hydrangea macrophylla HOM05D003523 ORTHO05D004493 7.2e-60 235.7 251 53.0
Ciclev10014062m.g Citrus clementina HOM05D003523 ORTHO05D004493 9.5e-60 235.3 255 51.0
TWI38G0549 Tripterygium wilfordii HOM05D003523 ORTHO05D004493 1.6e-59 234.6 252 52.4
Dinv07537 Davidia involucrata HOM05D003523 ORTHO05D004493 3.6e-59 233.4 252 51.6
CiPaw.09G057400 Carya illinoinensis HOM05D003523 ORTHO05D004493 8.0e-59 232.3 252 52.4
Duzib192G0623 Durio zibethinus HOM05D003523 ORTHO05D004493 2.3e-58 230.7 252 52.4
Manes.17G043400 Manihot esculenta HOM05D003523 ORTHO05D004493 4.0e-58 229.9 252 50.8
Cfa000415 Carpinus fangiana HOM05D003523 ORTHO05D004493 5.2e-58 229.6 261 50.2
FAN25G2846 Fragaria x ananassa HOM05D003523 ORTHO05D004493 5.2e-58 229.6 251 50.6
Thecc.06G190800 Theobroma cacao HOM05D003523 ORTHO05D004493 5.2e-58 229.6 252 52.0
FvH4_3g04860 Fragaria vesca HOM05D003523 ORTHO05D004493 1.2e-57 228.4 252 50.4
Potri.004G040300 Populus trichocarpa HOM05D003523 ORTHO05D004493 1.5e-57 228.0 250 51.6
Actinidia05616 Actinidia chinensis HOM05D003523 ORTHO05D004493 2.0e-57 227.6 252 52.0
Atru.chr10.1936 Acer truncatum HOM05D003523 ORTHO05D004493 2.6e-57 227.3 255 50.2
Solyc02g078520.4 Solanum lycopersicum HOM05D003523 ORTHO05D004493 2.6e-57 227.3 252 52.0
GSVIVG01002029001 Vitis vinifera HOM05D003523 ORTHO05D004493 2.6e-57 227.3 251 50.6
Sopen02g023370 Solanum pennellii HOM05D003523 ORTHO05D004493 3.4e-57 226.9 252 52.0
CSS0028341 Camellia sinensis var. sinensis HOM05D003523 ORTHO05D004493 4.4e-57 226.5 252 51.6
COL.COLO4_31502 Corchorus olitorius HOM05D003523 ORTHO05D004493 5.7e-57 226.1 252 51.2
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 5.7e-57 226.1 247 50.6
Peaxi162Scf00379g00211 Petunia axillaris HOM05D003523 ORTHO05D004493 5.7e-57 226.1 247 51.4
Ca_18531_v3 Cicer arietinum L. HOM05D003523 ORTHO05D004493 7.5e-57 225.7 251 50.2
Nitab4.5_0006478g0020 Nicotiana tabacum HOM05D003523 ORTHO05D004493 7.5e-57 225.7 252 50.8
RcHm_v2.0_Chr5g0008021 Rosa chinensis HOM05D003523 ORTHO05D004493 9.8e-57 225.3 252 50.4
Potri.004G040400 Populus trichocarpa HOM05D003523 ORTHO05D004493 1.3e-56 224.9 250 51.2
PGSC0003DMG400022382 Solanum tuberosum HOM05D003523 ORTHO05D004493 1.3e-56 224.9 249 51.4
MD10G1296700 Malus domestica HOM05D003523 ORTHO05D004493 1.7e-56 224.6 252 50.0
Sc05g0007810 Simmondsia chinensis HOM05D003523 ORTHO05D004493 1.7e-56 224.6 253 49.8
Potri.011G049700 Populus trichocarpa HOM05D003523 ORTHO05D004493 2.2e-56 224.2 254 49.2
arahy.Tifrunner.gnm1.ann1.FP1IKL Arachis hypogaea HOM05D003523 ORTHO05D004493 2.8e-56 223.8 248 50.8
arahy.Tifrunner.gnm1.ann1.H4J46B Arachis hypogaea HOM05D003523 ORTHO05D004493 2.8e-56 223.8 248 50.8
HanXRQChr16g0518201 Helianthus annuus HOM05D003523 ORTHO05D004493 2.8e-56 223.8 252 50.4
Prupe.4G043900 Prunus persica HOM05D003523 ORTHO05D004493 2.8e-56 223.8 247 51.4
Cc02_g13070 Coffea canephora HOM05D003523 ORTHO05D004493 4.9e-56 223.0 252 50.0
Migut.M01189 Erythranthe guttata HOM05D003523 ORTHO05D004493 4.9e-56 223.0 252 50.0
Lj2A286G46 Lonicera japonica HOM05D003523 ORTHO05D004493 4.9e-56 223.0 251 51.4
Lj6g0009911 Lotus japonicus HOM05D003523 ORTHO05D004493 6.3e-56 222.6 251 49.0
TAR629G1272 Trochodendron aralioides HOM05D003523 ORTHO05D004493 6.3e-56 222.6 252 50.8
MELO3C002588.2 Cucumis melo HOM05D003523 ORTHO05D004493 8.3e-56 222.2 252 49.6
Nn1g04016 Nelumbo nucifera HOM05D003523 ORTHO05D004493 8.3e-56 222.2 251 51.0
Eucgr.D00642 Eucalyptus grandis HOM05D003523 ORTHO05D004493 1.1e-55 221.9 250 51.6
Glyma.13G241100 Glycine max HOM05D003523 ORTHO05D004493 1.1e-55 221.9 251 49.4
CsaV3_1G012140 Cucumis sativus L. HOM05D003523 ORTHO05D004493 1.8e-55 221.1 252 49.2
TAR627G0569 Trochodendron aralioides HOM05D003523 ORTHO05D004493 1.8e-55 221.1 252 49.6
MD05G1316200 Malus domestica HOM05D003523 ORTHO05D004493 2.4e-55 220.7 252 50.4
ECA234G2309 Erigeron canadensis HOM05D003523 ORTHO05D004493 3.1e-55 220.3 251 51.0
CANSAT35G0505 Cannabis sativa HOM05D003523 ORTHO05D004493 4.1e-55 219.9 253 49.0
Gohir.A10G024100 Gossypium hirsutum HOM05D003523 ORTHO05D004493 4.1e-55 219.9 252 50.4
Gorai.011G026100 Gossypium raimondii HOM05D003523 ORTHO05D004493 4.1e-55 219.9 252 50.4
MBI17_g03749_MAGBIO Magnolia biondii HOM05D003523 ORTHO05D004493 4.1e-55 219.9 254 49.2
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 5.4e-55 219.5 244 50.4
EL10Ac8g20345 Beta vulgaris HOM05D003523 ORTHO05D004493 7.0e-55 219.2 252 49.6
Haze_06501 Corylus avellana HOM05D003523 ORTHO05D004493 7.0e-55 219.2 246 50.4
Gohir.D10G024800 Gossypium hirsutum HOM05D003523 ORTHO05D004493 7.0e-55 219.2 252 50.4
HanXRQChr16g0511231 Helianthus annuus HOM05D003523 ORTHO05D004493 7.0e-55 219.2 246 50.4
THA.LOC104812899 Tarenaya hassleriana HOM05D003523 ORTHO05D004493 7.0e-55 219.2 252 49.2
Glyma.13G181200 Glycine max HOM05D003523 ORTHO05D004493 9.2e-55 218.8 251 48.6
unitig_748.g8004 Utricularia gibba HOM05D003523 ORTHO05D004493 9.2e-55 218.8 253 48.2
Lj1A1207T84 Lonicera japonica HOM05D003523 ORTHO05D004493 1.2e-54 218.4 253 50.2
Lj4g0014475 Lotus japonicus HOM05D003523 ORTHO05D004493 1.2e-54 218.4 251 49.4
Phvul.002G227600 Phaseolus vulgaris HOM05D003523 ORTHO05D004493 1.6e-54 218.0 251 49.0
Sed0007449 Sechium edule HOM05D003523 ORTHO05D004493 2.0e-54 217.6 252 47.6
VMungo0251G3152 Vigna mungo HOM05D003523 ORTHO05D004493 2.7e-54 217.2 251 48.6
arahy.Tifrunner.gnm1.ann1.HK023S Arachis hypogaea HOM05D003523 ORTHO05D004493 5.9e-54 216.1 251 48.6
arahy.Tifrunner.gnm1.ann1.WE2A0Y Arachis hypogaea HOM05D003523 ORTHO05D004493 5.9e-54 216.1 251 48.6
Psat7g112840 Pisum sativum HOM05D003523 ORTHO05D004493 1.0e-53 215.3 251 48.6
BcaC04g21345 Brassica carinata HOM05D003523 ORTHO05D004493 1.3e-53 214.9 254 50.0
A09p25980 Brassica napus HOM05D003523 ORTHO05D004493 1.3e-53 214.9 254 50.0
C09p32950 Brassica napus HOM05D003523 ORTHO05D004493 1.3e-53 214.9 254 50.0
SGA_v2.0_scaffold7G03976 Striga asiatica HOM05D003523 ORTHO05D004493 1.3e-53 214.9 245 49.8
THA.LOC104806291 Tarenaya hassleriana HOM05D003523 ORTHO05D004493 1.3e-53 214.9 261 47.5
TPR.G36850 Trifolium pratense HOM05D003523 ORTHO05D004493 2.3e-53 214.2 251 47.0
Sabra11G0034200 Salix brachista HOM05D003523 ORTHO05D004493 2.9e-53 213.8 258 48.4
Medtr4g088965 Medicago truncatula HOM05D003523 ORTHO05D004493 5.0e-53 213.0 251 48.2
SalBow8G0447 Salvia bowleyana HOM05D003523 ORTHO05D004493 5.0e-53 213.0 252 49.2
MSTRG.7305 Avicennia marina HOM05D003523 ORTHO05D004493 6.6e-53 212.6 247 49.4
BraA09t38165Z Brassica rapa HOM05D003523 ORTHO05D004493 6.6e-53 212.6 249 50.2
AUR62014791 Chenopodium quinoa HOM05D003523 ORTHO05D004493 6.6e-53 212.6 255 48.6
ClCG03G005910 Citrullus lanatus HOM05D003523 ORTHO05D004493 6.6e-53 212.6 244 49.2
Thhalv10028367m.g Eutrema salsugineum HOM05D003523 ORTHO05D004493 6.6e-53 212.6 244 49.6
BolC9t56130H Brassica oleracea HOM05D003523 ORTHO05D004493 8.6e-53 212.2 254 49.6
PGR004G0168 Punica granatum HOM05D003523 ORTHO05D004493 8.6e-53 212.2 253 47.8
Lsat_1_v5_gn_4_52460 Lactuca sativa HOM05D003523 ORTHO05D004493 1.1e-52 211.8 258 48.1
VMungo0540G1836 Vigna mungo HOM05D003523 ORTHO05D004493 1.1e-52 211.8 243 49.8
Carub.0006s3284 Capsella rubella HOM05D003523 ORTHO05D004493 1.5e-52 211.5 252 48.4
Ah.14g089320 Amaranthus hybridus HOM05D003523 ORTHO05D004493 1.9e-52 211.1 252 48.8
BcaB01g01847 Brassica carinata HOM05D003523 ORTHO05D004493 1.9e-52 211.1 254 49.2
BcaB05g23702 Brassica carinata HOM05D003523 ORTHO05D004493 1.9e-52 211.1 245 49.4
AL6G48430 Arabidopsis lyrata HOM05D003523 ORTHO05D004493 2.5e-52 210.7 252 48.4
Aa31LG9G9570 Aethionema arabicum HOM05D003523 ORTHO05D004493 4.3e-52 209.9 249 47.8
CDE08G1359 Ceratophyllum demersum HOM05D003523 ORTHO05D004493 5.6e-52 209.5 254 46.9
DCAR_028097 Daucus carota HOM05D003523 ORTHO05D004493 5.6e-52 209.5 258 47.3
Sp6g04040 Schrenkiella parvula HOM05D003523 ORTHO05D004493 5.6e-52 209.5 245 49.4
SpUn0051_0020 Schrenkiella parvula HOM05D003523 ORTHO05D004493 5.6e-52 209.5 245 49.4
AT4G04920 Arabidopsis thaliana HOM05D003523 ORTHO05D004493 7.3e-52 209.1 252 48.8
PSO675G2502 Papaver somniferum HOM05D003523 ORTHO05D004493 7.3e-52 209.1 259 46.3
Phvul.006G187600 Phaseolus vulgaris HOM05D003523 ORTHO05D004493 9.5e-52 208.8 248 48.4
Lalb_Chr20g0121981 Lupinus albus HOM05D003523 ORTHO05D004493 1.2e-51 208.4 251 47.8
CARHR252610 Cardamine hirsuta HOM05D003523 ORTHO05D004493 1.6e-51 208.0 250 49.2
PSO541G1427 Papaver somniferum HOM05D003523 ORTHO05D004493 1.6e-51 208.0 255 46.7
Sabra04G0024900 Salix brachista HOM05D003523 ORTHO05D004493 2.1e-51 207.6 293 43.7
TPR.G12099 Trifolium pratense HOM05D003523 ORTHO05D004493 2.8e-51 207.2 239 49.8
Aqoxy4G01061 Aquilegia oxysepala HOM05D003523 ORTHO05D004493 4.7e-51 206.5 250 46.8
Lalb_Chr09g0327601 Lupinus albus HOM05D003523 ORTHO05D004493 6.1e-51 206.1 251 47.4
Medtr2g013180 Medicago truncatula HOM05D003523 ORTHO05D004493 8.0e-51 205.7 239 46.4
CAN.G1164.7 Capsicum annuum HOM05D003523 ORTHO05D004493 1.8e-50 204.5 238 50.0
Os10g0498700 Oryza sativa ssp. japonica HOM05D003523 ORTHO05D004493 6.8e-50 202.6 254 45.3
RhsimUnG0044700 Rhododendron simsii HOM05D003523 ORTHO05D004493 6.8e-50 202.6 316 43.0
HPP92_028517 Vanilla planifolia HOM05D003523 ORTHO05D004493 1.5e-49 201.4 252 48.0
Medtr2g013160 Medicago truncatula HOM05D003523 ORTHO05D004493 5.7e-49 199.5 245 46.1
Aqoxy1G02553 Aquilegia oxysepala HOM05D003523 ORTHO05D004493 1.7e-48 198.0 249 46.6
Zm00001eb044560 Zea mays HOM05D003523 ORTHO05D004493 8.3e-48 195.7 252 46.4
ATR0680G247 Amborella trichopoda HOM05D003523 ORTHO05D004493 4.1e-47 193.4 251 45.8
AUR62016978 Chenopodium quinoa HOM05D003523 ORTHO05D004493 1.2e-43 181.8 252 42.9
Lsat_1_v5_gn_7_19581 Lactuca sativa HOM05D003523 ORTHO05D004493 1.6e-43 181.4 235 45.5
HPP92_028530 Vanilla planifolia HOM05D003523 ORTHO05D004493 2.6e-41 174.1 252 44.0
SEGI_30667 Sequoiadendron giganteum HOM05D003523 ORTHO05D004493 2.4e-39 167.5 245 41.2
TWI63G0185 Tripterygium wilfordii HOM05D003523 ORTHO05D004493 4.1e-39 166.8 198 50.0
Pp3c9_3120 Physcomitrium patens HOM05D003523 ORTHO05D004493 6.0e-38 162.9 237 39.2
Actinidia01893 Actinidia chinensis HOM05D003523 ORTHO05D004493 1.3e-37 161.8 217 44.7
Ca_00312_v3 Cicer arietinum L. HOM05D003523 ORTHO05D004493 1.9e-36 157.9 198 46.5
Mapoly0126s0036 Marchantia polymorpha HOM05D003523 ORTHO05D004493 3.3e-36 157.1 246 37.4
Glyma.15G072332 Glycine max HOM05D003523 ORTHO05D004493 1.4e-31 141.7 179 46.4
Dinv40538 Davidia involucrata HOM05D003523 ORTHO05D004493 9.2e-31 139.0 216 42.6
Cpa.g.sc27.67 Carica papaya HOM05D003523 ORTHO05D004493 1.9e-28 131.3 198 41.9
CSS0036865 Camellia sinensis var. sinensis HOM05D003523 ORTHO05D004493 3.1e-26 124.0 88 65.9
CAN.G1164.6 Capsicum annuum HOM05D003523 ORTHO05D004493 4.0e-26 123.6 80 71.2
SHI01796 Sapria himalayana HOM05D003523 ORTHO05D004493 6.8e-26 122.9 195 39.5
TPR.G12094 Trifolium pratense HOM05D003523 ORTHO05D004493 1.3e-24 118.6 169 40.2
Lsat_1_v5_gn_7_19601 Lactuca sativa HOM05D003523 ORTHO05D004493 1.4e-23 115.2 127 51.2
arahy.Tifrunner.gnm1.ann1.PB6F44 Arachis hypogaea HOM05D003523 ORTHO05D004493 3.2e-23 114.0 154 43.5
GSVIVG01002224001 Vitis vinifera HOM05D003523 ORTHO05D004493 2.1e-22 111.3 117 53.8
CBR_g31987 Chara braunii HOM05D003523 ORTHO05D004493 7.8e-22 109.4 271 30.3
MD05G1315900 Malus domestica HOM05D003523 ORTHO05D004493 3.0e-21 107.5 86 61.6
Medtr2g013190 Medicago truncatula HOM05D003523 ORTHO05D004493 1.9e-20 104.8 143 40.6
Glyma.15G072266 Glycine max HOM05D003523 ORTHO05D004493 7.3e-20 102.8 153 41.2
SEGI_00038 Sequoiadendron giganteum HOM05D003523 ORTHO05D004493 1.1e-18 99.0 89 55.1
AagrBONN_evm.TU.Sc2ySwM_117.3890 Anthoceros agrestis HOM05D003523 ORTHO05D004493 4.9e-16 90.1 104 44.2
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 4.9e-16 90.1 169 39.6
Medtr1g072060 Medicago truncatula HOM05D003523 ORTHO05D004493 1.4e-15 88.6 123 40.7
SHI01792 Sapria himalayana HOM05D003523 ORTHO05D004493 1.2e-14 85.5 66 60.6
Cpa.g.sc3186.1 Carica papaya HOM05D003523 ORTHO05D004493 5.1e-13 80.1 128 42.2
Medtr1g072070 Medicago truncatula HOM05D003523 ORTHO05D004493 1.1e-12 79.0 108 43.5
Psat1g206120 Pisum sativum HOM05D003523 ORTHO05D004493 4.3e-12 77.0 62 56.5
Psat1g020360 Pisum sativum HOM05D003523 ORTHO05D014542 3.1e-10 70.9 57 56.1
Medtr5g040120 Medicago truncatula HOM05D003523 ORTHO05D004493 9.0e-10 69.3 64 51.6
Medtr7g039500 Medicago truncatula HOM05D003523 ORTHO05D004493 7.6e-09 66.2 64 50.0
Medtr2g013150 Medicago truncatula HOM05D003523 ORTHO05D004493 1.3e-08 65.5 129 38.8
Psat0s3229g0080 Pisum sativum HOM05D003523 ORTHO05D004493 3.2e-07 60.8 52 51.9


User provided reference genes

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