Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 2.0e-203 712.2 365 100.0
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 3.4e-158 562.0 356 84.6
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 1.3e-122 443.7 360 70.8
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 3.7e-88 329.3 366 51.1
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 2.3e-82 310.1 359 50.1
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 4.4e-73 279.3 354 48.6
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 7.4e-73 278.5 322 50.3
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 8.8e-66 255.0 298 53.4
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 6.3e-64 248.8 321 45.5
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.6e-62 244.2 337 46.9
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 7.7e-62 241.9 324 45.1
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.3e-61 241.1 321 45.8
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 8.0e-59 231.9 331 45.6
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.4e-58 231.1 324 45.4
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.8e-56 222.6 351 41.0
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.1e-55 221.5 326 40.5
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 2.0e-54 217.2 315 42.2
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 3.5e-54 216.5 353 38.2
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 3.2e-52 209.9 328 39.3
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 5.5e-52 209.1 332 40.4
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 7.2e-52 208.8 327 42.5
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 7.2e-52 208.8 381 40.4
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 1.2e-51 208.0 328 39.6
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 2.1e-51 207.2 336 37.2
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 2.1e-51 207.2 326 39.9
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 4.7e-51 206.1 336 36.9
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 1.8e-50 204.1 348 40.5
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 4.0e-50 203.0 356 39.0
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 5.2e-50 202.6 328 39.9
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 2.6e-49 200.3 332 38.9
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 3.4e-49 199.9 326 41.4
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 4.4e-49 199.5 330 39.1
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 5.7e-49 199.1 332 39.8
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 1.3e-48 198.0 326 39.6
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 8.3e-48 195.3 331 40.2
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 8.3e-48 195.3 316 42.1
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 8.3e-48 195.3 314 40.1
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 1.4e-47 194.5 327 38.2
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.8e-47 194.1 331 39.9
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 3.1e-47 193.4 328 39.0
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 3.1e-47 193.4 311 40.8
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 3.1e-47 193.4 320 40.9
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 5.4e-47 192.6 327 39.4
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 9.2e-47 191.8 328 38.7
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 9.2e-47 191.8 371 39.4
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 2.7e-46 190.3 308 41.2
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 2.7e-46 190.3 308 41.2
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 3.5e-46 189.9 353 39.9
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 5.9e-46 189.1 331 37.8
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 7.7e-46 188.7 322 37.3
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.3e-45 188.0 351 38.7
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 2.9e-45 186.8 328 38.4
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 5.0e-45 186.0 353 37.1
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 4.3e-44 183.0 328 38.7
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 4.3e-44 183.0 368 35.3
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 5.6e-44 182.6 374 36.1
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 5.6e-44 182.6 330 39.4
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 1.2e-43 181.4 330 39.7
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 4.7e-43 179.5 324 39.5
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.4e-42 177.9 344 36.6
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 3.0e-42 176.8 372 36.3
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 6.8e-42 175.6 344 36.0
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 8.9e-42 175.3 338 36.7
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 1.2e-41 174.9 168 57.1
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.0e-41 174.1 345 37.1
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 2.0e-41 174.1 350 38.0
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 4.4e-41 172.9 321 39.3
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.7e-40 171.0 292 40.4
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 3.7e-40 169.9 330 37.6
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.1e-39 168.3 314 37.6
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 3.5e-38 163.3 319 36.7
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 5.9e-38 162.5 316 36.4
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 7.8e-38 162.2 318 38.1
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 1.7e-37 161.0 325 35.4
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 1.7e-37 161.0 330 34.5
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 5.6e-36 156.0 342 38.6
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 1.6e-35 154.5 325 35.1
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 2.1e-35 154.1 331 35.0
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 4.7e-35 152.9 327 37.3
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 1.0e-34 151.8 297 36.7
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 2.3e-34 150.6 322 32.3
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 5.2e-34 149.4 321 36.8
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 8.9e-34 148.7 325 37.2
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 1.2e-33 148.3 317 34.4
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 1.5e-33 147.9 323 34.4
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 2.0e-33 147.5 328 37.2
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 4.4e-33 146.4 352 31.5
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 7.5e-33 145.6 316 35.1
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 9.8e-33 145.2 327 34.9
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 1.7e-32 144.4 331 33.2
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 4.9e-32 142.9 328 34.5
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 6.4e-32 142.5 340 33.5
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 8.3e-32 142.1 324 34.6
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 2.4e-31 140.6 317 36.0
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 7.0e-31 139.0 322 33.9
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 1.2e-30 138.3 321 36.1
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 1.2e-30 138.3 329 32.8
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 1.6e-30 137.9 367 30.0
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.0e-30 137.5 326 33.1
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 2.0e-30 137.5 330 33.3
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 6.0e-30 136.0 314 33.1
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 7.8e-30 135.6 335 34.3
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 7.8e-30 135.6 335 34.3
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 1.0e-29 135.2 351 33.0
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 1.3e-29 134.8 360 32.5
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 1.3e-29 134.8 346 33.5
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 1.7e-29 134.4 326 33.4
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 3.0e-29 133.7 332 33.7
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 3.0e-29 133.7 332 33.7
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 3.0e-29 133.7 332 33.7
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 3.0e-29 133.7 351 33.0
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 5.0e-29 132.9 334 33.2
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 6.6e-29 132.5 332 32.5
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.9e-28 131.0 333 33.3
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 2.5e-28 130.6 326 32.8
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 2.5e-28 130.6 341 31.4
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 2.5e-28 130.6 339 31.0
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 5.6e-28 129.4 206 40.8
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 7.3e-28 129.0 372 32.8
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 2.8e-27 127.1 342 31.9
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 4.7e-27 126.3 204 39.7
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 1.4e-26 124.8 203 40.4
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 1.8e-26 124.4 320 29.7
Migut.O00700 Erythranthe guttata HOM05D003719 ORTHO05D004116 1.8e-26 124.4 140 47.9
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.3e-26 124.0 325 32.3
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 2.3e-26 124.0 330 31.5
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 7.5e-25 119.0 240 36.2
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 9.8e-25 118.6 330 29.1
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 3.7e-24 116.7 320 30.6
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 1.1e-23 115.2 232 36.6
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 1.4e-23 114.8 315 29.2
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.4e-23 114.0 247 34.8
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 2.4e-23 114.0 318 30.8
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 3.2e-23 113.6 295 32.5
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 1.2e-22 111.7 295 34.2
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 6.0e-22 109.4 350 31.1
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 7.8e-22 109.0 321 32.7
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 8.6e-21 105.5 316 29.1
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 1.5e-20 104.8 239 33.5
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 1.5e-20 104.8 308 31.5
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 1.9e-20 104.4 318 30.5
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 4.3e-20 103.2 62 75.8
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 6.2e-19 99.4 269 30.5
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 6.2e-19 99.4 343 29.4
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 8.1e-19 99.0 180 38.3
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 1.8e-18 97.8 305 28.9
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 4.0e-18 96.7 279 31.2
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 4.0e-18 96.7 279 31.2
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 3.7e-16 90.1 68 55.9
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 5.4e-15 86.3 282 29.1
arahy.Tifrunner.gnm1.ann1.E07VAV Arachis hypogaea HOM05D003719 ORTHO05D004116 7.1e-15 85.9 314 27.4
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 9.2e-15 85.5 74 54.1
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 9.2e-15 85.5 74 54.1
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 9.2e-15 85.5 214 33.6
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 1.2e-14 85.1 87 51.7
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 2.1e-14 84.3 232 29.7
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 4.6e-14 83.2 81 49.4
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 7.8e-14 82.4 80 50.0
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 1.3e-13 81.6 94 45.7
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 1.3e-13 81.6 94 45.7
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 2.3e-13 80.9 97 37.1
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 3.0e-13 80.5 152 35.5
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 3.0e-13 80.5 98 42.9
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 6.6e-13 79.3 107 43.0
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 6.6e-13 79.3 129 36.4
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 2.5e-12 77.4 129 38.0
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 2.5e-12 77.4 82 48.8
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 2.5e-12 77.4 82 48.8
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 3.3e-12 77.0 77 45.5
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 4.3e-12 76.6 292 26.7
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 5.6e-12 76.3 82 47.6
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 9.6e-12 75.5 102 45.1
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 9.6e-12 75.5 83 45.8
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 1.6e-11 74.7 129 35.7
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 1.1e-10 72.0 66 47.0
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 6.4e-08 62.8 68 36.8
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 1.1e-07 62.0 73 35.6
Aqoxy7G02797 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 2.4e-07 60.8 71 35.2
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 7.1e-07 59.3 62 45.2
SHI15580 Sapria himalayana HOM05D003719 ORTHO05D004116 1.2e-06 58.5 289 26.0
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 1.6e-06 58.2 53 45.3
arahy.Tifrunner.gnm1.ann1.SX0HJ3 Arachis hypogaea HOM05D022377 ORTHO05D004116 2.1e-06 57.8 73 34.2
arahy.Tifrunner.gnm1.ann1.ACR8J8 Arachis hypogaea HOM05D022377 ORTHO05D004116 6.0e-06 56.2 65 32.3
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 7.8e-06 55.8 111 36.0


User provided reference genes

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