Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045562.1 Olea europaea HOM05D000966 ORTHO05D002384 1.5e-33 145.6 71 100.0
Oeu010275.1 Olea europaea HOM05D000966 ORTHO05D002384 1.1e-09 66.2 80 50.0
MSTRG.6167 Avicennia marina HOM05D000966 ORTHO05D002384 3.3e-09 64.7 80 47.5
HPP92_010350 Vanilla planifolia HOM05D000966 ORTHO05D002384 3.3e-09 64.7 79 49.4
SGA_v2.0_scaffold265G46072 Striga asiatica HOM05D000966 ORTHO05D002384 7.3e-09 63.5 80 48.8
EL10Ac8g18900 Beta vulgaris HOM05D000966 ORTHO05D002384 9.5e-09 63.2 83 47.0
Nn8g40137 Nelumbo nucifera HOM05D000966 ORTHO05D002384 1.2e-08 62.8 80 48.8
AUR62025379 Chenopodium quinoa HOM05D000966 ORTHO05D002384 2.1e-08 62.0 83 45.8
AUR62028372 Chenopodium quinoa HOM05D000966 ORTHO05D002384 2.1e-08 62.0 83 45.8
Migut.J01397 Erythranthe guttata HOM05D000966 ORTHO05D002384 2.8e-08 61.6 80 45.0
GSVIVG01023699001 Vitis vinifera HOM05D000966 ORTHO05D002384 2.8e-08 61.6 80 47.5
CAN.G1190.17 Capsicum annuum HOM05D000966 ORTHO05D002384 3.6e-08 61.2 80 45.0
CSS0008046 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 4.7e-08 60.8 80 46.2
CSS0013550 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 4.7e-08 60.8 80 46.2
Dinv41333 Davidia involucrata HOM05D000966 ORTHO05D002384 4.7e-08 60.8 80 46.2
MELO3C010193.2 Cucumis melo HOM05D000966 ORTHO05D002384 6.2e-08 60.5 80 46.2
PSO063G2137 Papaver somniferum HOM05D000966 ORTHO05D002384 6.2e-08 60.5 80 46.2
Hund26426 Selenicereus undatus HOM05D000966 ORTHO05D002384 6.2e-08 60.5 80 46.2
ATR0580G159 Amborella trichopoda HOM05D000966 ORTHO05D002384 8.1e-08 60.1 91 41.8
Solyc07g006060.3 Solanum lycopersicum HOM05D000966 ORTHO05D002384 8.1e-08 60.1 80 43.8
Sopen07g002180 Solanum pennellii HOM05D000966 ORTHO05D002384 8.1e-08 60.1 80 43.8
Cc06_g14440 Coffea canephora HOM05D000966 ORTHO05D002384 1.1e-07 59.7 80 45.0
ECA240G3489 Erigeron canadensis HOM05D000966 ORTHO05D002384 2.4e-07 58.5 80 45.0
PSO782G3854 Papaver somniferum HOM05D000966 ORTHO05D002384 2.4e-07 58.5 80 45.0
TWI34G0436 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 2.4e-07 58.5 80 43.8
vmacro13070 Vaccinium macrocarpon HOM05D000966 ORTHO05D002384 2.4e-07 58.5 80 45.0
Cfa020771 Carpinus fangiana HOM05D000966 ORTHO05D002384 3.1e-07 58.2 80 43.8
ClCG06G012700 Citrullus lanatus HOM05D000966 ORTHO05D002384 3.1e-07 58.2 80 45.0
TAR383G0488 Trochodendron aralioides HOM05D000966 ORTHO05D002384 3.1e-07 58.2 80 46.2
CDE02G0098 Ceratophyllum demersum HOM05D000966 ORTHO05D002384 4.0e-07 57.8 80 43.8
CsaV3_1G029250 Cucumis sativus L. HOM05D000966 ORTHO05D002384 4.0e-07 57.8 80 45.0
Nitab4.5_0002809g0080 Nicotiana tabacum HOM05D000966 ORTHO05D002384 4.0e-07 57.8 87 41.4
CAN.G572.45 Capsicum annuum HOM05D000966 ORTHO05D002384 5.2e-07 57.4 75 45.3
Rhsim01G0021300 Rhododendron simsii HOM05D000966 ORTHO05D002384 5.2e-07 57.4 80 43.8
Ah.09g228570 Amaranthus hybridus HOM05D000966 ORTHO05D002384 6.8e-07 57.0 80 43.8
AL7G21250 Arabidopsis lyrata HOM05D000966 ORTHO05D002384 6.8e-07 57.0 80 43.8
Lj6g0021714 Lotus japonicus HOM05D000966 ORTHO05D002384 6.8e-07 57.0 80 42.5
Sed0005530 Sechium edule HOM05D000966 ORTHO05D002384 6.8e-07 57.0 80 43.8
SEGI_10885 Sequoiadendron giganteum HOM05D000966 ORTHO05D002384 6.8e-07 57.0 78 44.9
SEGI_18174 Sequoiadendron giganteum HOM05D000966 ORTHO05D002384 6.8e-07 57.0 78 44.9
Lalb_Chr11g0072461 Lupinus albus HOM05D000966 ORTHO05D002384 8.9e-07 56.6 80 42.5
Nitab4.5_0001036g0020 Nicotiana tabacum HOM05D000966 ORTHO05D002384 8.9e-07 56.6 75 45.3
Peaxi162Scf00038g00615 Petunia axillaris HOM05D000966 ORTHO05D002384 8.9e-07 56.6 80 42.5
DCAR_014798 Daucus carota HOM05D000966 ORTHO05D002384 1.2e-06 56.2 80 42.5
MD16G1258900 Malus domestica HOM05D000966 ORTHO05D002384 1.2e-06 56.2 78 43.6
Mapoly0045s0061 Marchantia polymorpha HOM05D000966 ORTHO05D002384 1.2e-06 56.2 78 41.0
Aa31LG2G19520 Aethionema arabicum HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
AT4G30860 Arabidopsis thaliana HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
BcaC01g01135 Brassica carinata HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
A08p19050 Brassica napus HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
C03p88480 Brassica napus HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
BolC3t21156H Brassica oleracea HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
BraA08t33866Z Brassica rapa HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
COL.COLO4_36568 Corchorus olitorius HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 43.8
Duzib168G1082 Durio zibethinus HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 43.8
Psat1g023240 Pisum sativum HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
RcHm_v2.0_Chr4g0405361 Rosa chinensis HOM05D000966 ORTHO05D002384 1.5e-06 55.8 78 42.3
Sp7g28740 Schrenkiella parvula HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 42.5
Thecc.09G154800 Theobroma cacao HOM05D000966 ORTHO05D002384 1.5e-06 55.8 80 43.8
ECA240G2206 Erigeron canadensis HOM05D000966 ORTHO05D002384 2.6e-06 55.1 84 40.5
Eucgr.C01233 Eucalyptus grandis HOM05D000966 ORTHO05D002384 2.6e-06 55.1 80 41.2
Gohir.A13G206300 Gossypium hirsutum HOM05D000966 ORTHO05D002384 2.6e-06 55.1 80 43.8
Gohir.D13G210900 Gossypium hirsutum HOM05D000966 ORTHO05D002384 2.6e-06 55.1 80 43.8
Gorai.013G240900 Gossypium raimondii HOM05D000966 ORTHO05D002384 2.6e-06 55.1 80 43.8
Medtr0071s0100 Medicago truncatula HOM05D000966 ORTHO05D002384 2.6e-06 55.1 80 41.2
Sc14g0001010 Simmondsia chinensis HOM05D000966 ORTHO05D002384 2.6e-06 55.1 80 41.2
CANSAT11G0969 Cannabis sativa HOM05D000966 ORTHO05D002384 3.4e-06 54.7 80 43.8
Manes.14G113800 Manihot esculenta HOM05D000966 ORTHO05D002384 3.4e-06 54.7 80 42.5
Prupe.1G101500 Prunus persica HOM05D000966 ORTHO05D002384 3.4e-06 54.7 78 42.3
Zm00001eb184480 Zea mays HOM05D000966 ORTHO05D002384 3.4e-06 54.7 36 69.4
Atru.chr7.388 Acer truncatum HOM05D000966 ORTHO05D002384 4.4e-06 54.3 80 41.2
BcaB03g12663 Brassica carinata HOM05D000966 ORTHO05D002384 4.4e-06 54.3 80 41.2
Carub.0007s0969 Capsella rubella HOM05D000966 ORTHO05D002384 4.4e-06 54.3 80 41.2
CiPaw.15G163700 Carya illinoinensis HOM05D000966 ORTHO05D002384 4.4e-06 54.3 80 41.2
THA.LOC104819902 Tarenaya hassleriana HOM05D000966 ORTHO05D002384 4.4e-06 54.3 80 42.5
EL10Ac7g17540 Beta vulgaris HOM05D000966 ORTHO05D019838 7.6e-06 53.5 53 50.9
Ciclev10008144m.g Citrus clementina HOM05D000966 ORTHO05D002384 7.6e-06 53.5 80 41.2
FAN17G0011 Fragaria x ananassa HOM05D000966 ORTHO05D002384 7.6e-06 53.5 78 41.0
Hma1.2p1_0028F.1_g017810 Hydrangea macrophylla HOM05D000966 ORTHO05D002384 7.6e-06 53.5 80 41.2
VMungo1309G2426 Vigna mungo HOM05D000966 ORTHO05D002384 7.6e-06 53.5 80 40.0
arahy.Tifrunner.gnm1.ann1.BQLE9W Arachis hypogaea HOM05D000966 ORTHO05D002384 9.9e-06 53.1 80 40.0
arahy.Tifrunner.gnm1.ann1.XD33H1 Arachis hypogaea HOM05D000966 ORTHO05D002384 9.9e-06 53.1 80 40.0
FvH4_4g08820 Fragaria vesca HOM05D000966 ORTHO05D002384 9.9e-06 53.1 78 41.0


User provided reference genes

Program Settings