Gene: Sopen07g002180

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g002180
  • Transcript Identifier Sopen07g002180.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 1140044-1154908 : positive

Gene Family Information

  • ID HOM05D000966
  • #Genes/#Species 619/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g002180.1

Descriptions

  • Description Encodes a member of the trxG protein family. Contains a SET domain which is known to be involved in modification of histone tails by methylation. Interacts physically with AMS, but the implications of this interaction are unknown.Overexpression results in plieotrophic developmental defects. | SET domain group 4 (SDG4) | CONTAINS InterPro DOMAIN/s: SET domain , Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Post-SET domain , Zinc finger, FYVE/PHD-type , AWS | BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH3
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0042054
ISO
PLAZA Integrative Orthologyhistone methyltransferase activity AT4G30860
GO:0018024
ISO
PLAZA Homology (enrichment)histone-lysine N-methyltransferase activity HOM05D000966

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G30860
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT4G30860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001214 SET domain
IPR003616 Post-SET domain
IPR001965 Zinc finger, PHD-type
Mapman id Description
12.3.3.3 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-II histone methyltransferase (ASH)