Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045272.1 Olea europaea HOM05D004611 ORTHO05D005794 5.4e-287 990.3 519 100.0
MSTRG.21753 Avicennia marina HOM05D004611 ORTHO05D005794 8.0e-230 800.4 517 80.7
Lj6A696G31 Lonicera japonica HOM05D004611 ORTHO05D005794 1.4e-229 799.7 537 78.6
SGA_v2.0_scaffold123G33405 Striga asiatica HOM05D004611 ORTHO05D005794 2.6e-228 795.4 559 77.3
FAN12G0652 Fragaria x ananassa HOM05D004611 ORTHO05D005794 1.4e-226 789.6 539 77.2
Migut.N00024 Erythranthe guttata HOM05D004611 ORTHO05D005794 2.4e-226 788.9 516 79.7
Dinv15127 Davidia involucrata HOM05D004611 ORTHO05D005794 3.1e-226 788.5 530 78.1
Sopen01g023180 Solanum pennellii HOM05D004611 ORTHO05D005794 7.0e-226 787.3 541 77.1
FvH4_4g20770 Fragaria vesca HOM05D004611 ORTHO05D005794 2.0e-225 785.8 537 76.9
FAN07G0444 Fragaria x ananassa HOM05D004611 ORTHO05D005794 4.5e-225 784.6 539 76.4
PGSC0003DMG401001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 1.3e-224 783.1 538 77.3
RcHm_v2.0_Chr4g0426211 Rosa chinensis HOM05D004611 ORTHO05D005794 2.9e-224 781.9 537 76.5
Glyma.09G031900 Glycine max HOM05D004611 ORTHO05D005794 7.2e-223 777.3 524 78.4
Gohir.A02G056200 Gossypium hirsutum HOM05D004611 ORTHO05D005794 9.5e-223 776.9 542 76.6
Prupe.1G111500 Prunus persica HOM05D004611 ORTHO05D005794 9.5e-223 776.9 537 76.2
MD16G1147800 Malus domestica HOM05D004611 ORTHO05D005794 1.6e-222 776.2 537 76.5
Manes.03G208700 Manihot esculenta HOM05D004611 ORTHO05D005794 1.0e-221 773.5 537 76.5
MD13G1148000 Malus domestica HOM05D004611 ORTHO05D005794 1.4e-221 773.1 537 76.2
Thecc.04G307400 Theobroma cacao HOM05D004611 ORTHO05D005794 6.8e-221 770.8 521 78.3
CiPaw.02G072100 Carya illinoinensis HOM05D004611 ORTHO05D005794 1.2e-220 770.0 526 77.0
CAN.G179.3 Capsicum annuum HOM05D004611 ORTHO05D005794 2.0e-220 769.2 519 78.4
Duzib151G0109 Durio zibethinus HOM05D004611 ORTHO05D005794 2.0e-220 769.2 525 77.7
Cc03_g00470 Coffea canephora HOM05D004611 ORTHO05D005794 3.4e-220 768.5 519 77.6
Actinidia02513 Actinidia chinensis HOM05D004611 ORTHO05D005794 2.2e-219 765.8 521 76.8
Nitab4.5_0000062g0520 Nicotiana tabacum HOM05D004611 ORTHO05D005794 2.9e-219 765.4 519 78.0
Sabra08G0076500 Salix brachista HOM05D004611 ORTHO05D005794 2.9e-219 765.4 536 75.6
Peaxi162Scf00126g01513 Petunia axillaris HOM05D004611 ORTHO05D005794 6.4e-219 764.2 517 77.9
PGR004G0015 Punica granatum HOM05D004611 ORTHO05D005794 8.3e-219 763.8 538 75.1
arahy.Tifrunner.gnm1.ann1.J0E0JD Arachis hypogaea HOM05D004611 ORTHO05D005794 1.4e-218 763.1 527 76.5
arahy.Tifrunner.gnm1.ann1.VX19JK Arachis hypogaea HOM05D004611 ORTHO05D005794 2.4e-218 762.3 527 76.5
Rhsim02G0001700 Rhododendron simsii HOM05D004611 ORTHO05D005794 4.1e-218 761.5 518 76.8
Gorai.005G069100 Gossypium raimondii HOM05D004611 ORTHO05D005794 1.2e-217 760.0 523 76.9
TAR362G1323 Trochodendron aralioides HOM05D004611 ORTHO05D005794 1.6e-217 759.6 520 76.7
Gohir.D02G061400 Gossypium hirsutum HOM05D004611 ORTHO05D005794 2.0e-217 759.2 523 76.7
vmacro15164 Vaccinium macrocarpon HOM05D004611 ORTHO05D005794 2.7e-217 758.8 519 77.1
Potri.008G101200 Populus trichocarpa HOM05D004611 ORTHO05D005794 7.8e-217 757.3 557 72.2
COL.COLO4_34558 Corchorus olitorius HOM05D004611 ORTHO05D005794 2.3e-216 755.7 524 75.0
GSVIVG01034941001 Vitis vinifera HOM05D004611 ORTHO05D005794 8.6e-216 753.8 503 78.7
CSS0006805 Camellia sinensis var. sinensis HOM05D004611 ORTHO05D005794 4.3e-215 751.5 519 76.9
EL10Ac3g06291 Beta vulgaris HOM05D004611 ORTHO05D005794 5.6e-215 751.1 538 73.8
Glyma.15G136900 Glycine max HOM05D004611 ORTHO05D005794 5.6e-215 751.1 505 78.2
Solyc01g057850.4 Solanum lycopersicum HOM05D004611 ORTHO05D005794 7.3e-215 750.7 518 76.1
TWI73G0848 Tripterygium wilfordii HOM05D004611 ORTHO05D005794 9.5e-215 750.4 538 74.3
Cfa015689 Carpinus fangiana HOM05D004611 ORTHO05D005794 1.6e-214 749.6 537 73.9
VMungo0540G0237 Vigna mungo HOM05D004611 ORTHO05D005794 1.6e-214 749.6 505 78.0
PSO541G3737 Papaver somniferum HOM05D004611 ORTHO05D005794 4.7e-214 748.0 519 75.0
Aqoxy2G02628 Aquilegia oxysepala HOM05D004611 ORTHO05D005794 6.2e-214 747.7 528 75.2
AUR62030016 Chenopodium quinoa HOM05D004611 ORTHO05D005794 6.2e-214 747.7 539 72.9
Phvul.006G121000 Phaseolus vulgaris HOM05D004611 ORTHO05D005794 1.4e-213 746.5 505 77.8
ClCG06G004360 Citrullus lanatus HOM05D004611 ORTHO05D005794 1.8e-213 746.1 533 74.9
PSO675G3276 Papaver somniferum HOM05D004611 ORTHO05D005794 1.8e-213 746.1 519 74.8
Nn8g40813 Nelumbo nucifera HOM05D004611 ORTHO05D005794 2.3e-213 745.7 525 74.1
AUR62002591 Chenopodium quinoa HOM05D004611 ORTHO05D005794 3.1e-213 745.3 540 72.6
Atru.chr4.3104 Acer truncatum HOM05D004611 ORTHO05D005794 4.0e-213 745.0 523 75.9
DCAR_030442 Daucus carota HOM05D004611 ORTHO05D005794 1.7e-211 739.6 524 73.5
Lalb_Chr18g0058501 Lupinus albus HOM05D004611 ORTHO05D005794 2.2e-211 739.2 505 76.4
TPR.G10113 Trifolium pratense HOM05D004611 ORTHO05D005794 2.9e-211 738.8 505 75.8
Lj6g0013514 Lotus japonicus HOM05D004611 ORTHO05D005794 4.9e-211 738.0 505 76.8
Ca_00946_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 6.4e-211 737.6 505 76.4
Ca_00952_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 6.4e-211 737.6 505 76.4
Sed0020756 Sechium edule HOM05D004611 ORTHO05D005794 8.3e-211 737.3 535 73.8
Psat1g162720 Pisum sativum HOM05D004611 ORTHO05D005794 1.4e-210 736.5 505 76.0
Sc25g0001590 Simmondsia chinensis HOM05D004611 ORTHO05D005794 1.9e-210 736.1 516 74.8
Eucgr.H04083 Eucalyptus grandis HOM05D004611 ORTHO05D005794 5.4e-210 734.6 517 74.5
QL06p013322 Quercus lobata HOM05D004611 ORTHO05D005794 7.0e-210 734.2 519 74.8
MBI19_g32689_MAGBIO Magnolia biondii HOM05D004611 ORTHO05D005794 1.6e-209 733.0 520 73.7
HanXRQChr11g0353941 Helianthus annuus HOM05D004611 ORTHO05D005794 1.0e-208 730.3 516 75.4
Lsat_1_v5_gn_1_40220 Lactuca sativa HOM05D004611 ORTHO05D005794 6.6e-208 727.6 515 75.3
THA.LOC104818864 Tarenaya hassleriana HOM05D004611 ORTHO05D005794 1.5e-207 726.5 501 75.6
CARHR258790 Cardamine hirsuta HOM05D004611 ORTHO05D005794 9.5e-207 723.8 502 75.7
CANSAT78G0742 Cannabis sativa HOM05D004611 ORTHO05D005794 2.1e-206 722.6 519 73.8
AL8G23880 Arabidopsis lyrata HOM05D004611 ORTHO05D005794 8.9e-205 717.2 501 75.0
Aa31LG3G6800 Aethionema arabicum HOM05D004611 ORTHO05D005794 1.5e-204 716.5 502 74.7
Ciclev10004185m.g Citrus clementina HOM05D004611 ORTHO05D005794 2.0e-204 716.1 553 70.0
CsaV3_6G000020 Cucumis sativus L. HOM05D004611 ORTHO05D005794 2.6e-204 715.7 514 73.9
MELO3C021251.2 Cucumis melo HOM05D004611 ORTHO05D005794 3.4e-204 715.3 514 74.5
Ah.07g203900 Amaranthus hybridus HOM05D004611 ORTHO05D005794 2.2e-203 712.6 522 71.5
ECA247G1486 Erigeron canadensis HOM05D004611 ORTHO05D005794 2.2e-203 712.6 499 75.8
AT5G49930 Arabidopsis thaliana HOM05D004611 ORTHO05D005794 6.4e-203 711.1 502 74.1
BcaC01g04844 Brassica carinata HOM05D004611 ORTHO05D005794 1.4e-202 709.9 500 75.0
C03p33270 Brassica napus HOM05D004611 ORTHO05D005794 1.4e-202 709.9 500 75.0
ATR0693G069 Amborella trichopoda HOM05D004611 ORTHO05D005794 2.4e-202 709.1 512 71.9
BraA03t11969Z Brassica rapa HOM05D004611 ORTHO05D005794 3.2e-202 708.8 498 74.9
BolC3t15649H Brassica oleracea HOM05D004611 ORTHO05D005794 4.1e-202 708.4 500 75.0
Carub.0008s0980 Capsella rubella HOM05D004611 ORTHO05D005794 5.4e-202 708.0 502 74.1
Sp6g11490 Schrenkiella parvula HOM05D004611 ORTHO05D005794 5.4e-202 708.0 503 74.6
A03p27560 Brassica napus HOM05D004611 ORTHO05D005794 7.1e-202 707.6 498 74.9
DCAR_002526 Daucus carota HOM05D004611 ORTHO05D005794 7.1e-202 707.6 541 68.8
CDE02G0179 Ceratophyllum demersum HOM05D004611 ORTHO05D005794 9.2e-202 707.2 538 69.1
Thhalv10012510m.g Eutrema salsugineum HOM05D004611 ORTHO05D005794 2.1e-201 706.1 502 73.9
BcaB01g02933 Brassica carinata HOM05D004611 ORTHO05D005794 6.0e-201 704.5 498 74.5
GSVIVG01017617001 Vitis vinifera HOM05D004611 ORTHO05D005794 1.1e-194 683.7 517 72.1
Os12g0564600 Oryza sativa ssp. japonica HOM05D004611 ORTHO05D005794 6.0e-193 677.9 539 66.6
Zm00001eb136770 Zea mays HOM05D004611 ORTHO05D005794 8.6e-192 674.1 537 65.7
Haze_00831 Corylus avellana HOM05D004611 ORTHO05D005794 3.5e-185 652.1 510 69.0
unitig_746.g26903 Utricularia gibba HOM05D004611 ORTHO05D005794 5.6e-183 644.8 527 67.6
Pp3c6_29680 Physcomitrium patens HOM05D004611 ORTHO05D005794 1.4e-165 587.0 547 58.3
AagrBONN_evm.TU.Sc2ySwM_344.977 Anthoceros agrestis HOM05D004611 ORTHO05D005794 1.8e-160 570.1 506 59.3
Mapoly0029s0152 Marchantia polymorpha HOM05D004611 ORTHO05D005794 7.4e-159 564.7 527 58.6
SMO356G0321 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 2.1e-153 546.6 498 58.4
FAN17G1213 Fragaria x ananassa HOM05D004611 ORTHO05D005794 2.5e-143 513.1 382 72.5
Actinidia14243 Actinidia chinensis HOM05D004611 ORTHO05D005794 2.9e-139 499.6 459 62.7
HPP92_010927 Vanilla planifolia HOM05D004611 ORTHO05D005794 1.8e-136 490.3 389 66.3
Nitab4.5_0003678g0010 Nicotiana tabacum HOM05D004611 ORTHO05D005794 2.4e-133 479.9 364 71.4
CBR_g49302 Chara braunii HOM05D004611 ORTHO05D005794 5.0e-131 472.2 701 42.5
GSVIVG01017631001 Vitis vinifera HOM05D004611 ORTHO05D005794 5.2e-120 435.6 355 67.0
Cpa.g.sc146.72 Carica papaya HOM05D004611 ORTHO05D005794 4.4e-119 432.6 331 68.9
PRCOL_00000926 Prasinoderma coloniale HOM05D004611 ORTHO05D005794 4.7e-105 386.0 535 44.7
SEGI_02813 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 2.9e-94 350.1 358 53.9
arahy.Tifrunner.gnm1.ann1.JPBR4U Arachis hypogaea HOM05D004611 ORTHO05D005794 8.6e-91 338.6 234 76.1
MCO13G239 Micromonas commoda HOM05D004611 ORTHO05D005794 2.2e-78 297.4 563 35.5
arahy.Tifrunner.gnm1.ann1.PAF7VJ Arachis hypogaea HOM05D004611 ORTHO05D005794 3.3e-66 256.9 149 89.9
SEGI_18823 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 1.6e-65 254.6 147 85.7
Cfa025106 Carpinus fangiana HOM05D004611 ORTHO05D005794 7.1e-53 212.6 561 31.7
Actinidia07518 Actinidia chinensis HOM05D004611 ORTHO05D005794 1.2e-52 211.8 193 58.5
HPP92_010928 Vanilla planifolia HOM05D004611 ORTHO05D005794 1.2e-52 211.8 127 84.3
arahy.Tifrunner.gnm1.ann1.MSK2EL Arachis hypogaea HOM05D004611 ORTHO05D005794 6.7e-51 206.1 113 92.0
Actinidia07517 Actinidia chinensis HOM05D004611 ORTHO05D005794 4.3e-50 203.4 106 96.2
arahy.Tifrunner.gnm1.ann1.631YT7 Arachis hypogaea HOM05D004611 ORTHO05D005794 1.6e-49 201.4 111 91.9
arahy.Tifrunner.gnm1.ann1.N4MQ0H Arachis hypogaea HOM05D004611 ORTHO05D005794 3.7e-49 200.3 113 90.3
arahy.Tifrunner.gnm1.ann1.G1FZ3Z Arachis hypogaea HOM05D004611 ORTHO05D005794 6.9e-48 196.1 113 88.5
arahy.Tifrunner.gnm1.ann1.80REVR Arachis hypogaea HOM05D004611 ORTHO05D005794 9.0e-48 195.7 113 88.5
arahy.Tifrunner.gnm1.ann1.KEPZ3C Arachis hypogaea HOM05D004611 ORTHO05D005794 1.2e-44 185.3 109 88.1
arahy.Tifrunner.gnm1.ann1.F9ANIH Arachis hypogaea HOM05D004611 ORTHO05D005794 2.5e-42 177.6 106 86.8
Actinidia25067 Actinidia chinensis HOM05D004611 ORTHO05D005794 1.5e-39 168.3 249 46.6
Atru.chr6.2576 Acer truncatum HOM05D004611 ORTHO05D005794 1.3e-38 165.2 97 83.5
arahy.Tifrunner.gnm1.ann1.LTB099 Arachis hypogaea HOM05D004611 ORTHO05D005794 1.7e-38 164.9 99 84.8
Cpa.g.sc146.71 Carica papaya HOM05D004611 ORTHO05D005794 7.4e-34 149.4 82 91.5
SMO356G0537 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 5.9e-23 113.2 150 43.3
Cre17.g734961 Chlamydomonas reinhardtii HOM05D004611 ORTHO05D005794 1.3e-22 112.1 152 47.4
arahy.Tifrunner.gnm1.ann1.0CQZ6Z Arachis hypogaea HOM05D000862 ORTHO05D000003 2.9e-22 110.9 107 58.9
arahy.Tifrunner.gnm1.ann1.R4H24K Arachis hypogaea HOM05D000862 ORTHO05D000003 8.5e-22 109.4 107 57.9
COL.COLO4_13521 Corchorus olitorius HOM05D004611 ORTHO05D005794 2.1e-20 104.8 160 44.4
GSVIVG01017613001 Vitis vinifera HOM05D004611 ORTHO05D005794 5.9e-15 86.7 57 80.7
GSVIVG01017626001 Vitis vinifera HOM05D004611 ORTHO05D005794 5.9e-15 86.7 57 80.7


User provided reference genes

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