Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043443.2 Olea europaea HOM05D005307 ORTHO05D006695 5.3e-308 1060.8 831 100.0
Oeu002923.1 Olea europaea HOM05D005307 ORTHO05D006695 7.0e-244 847.8 859 77.1
SalBow8G0791 Salvia bowleyana HOM05D005307 ORTHO05D006695 1.2e-187 661.0 658 62.0
Haze_11645 Corylus avellana HOM05D005307 ORTHO05D006695 1.0e-186 657.9 615 69.6
Dinv38181 Davidia involucrata HOM05D005307 ORTHO05D006695 8.7e-186 654.8 607 73.5
QL06p026221 Quercus lobata HOM05D005307 ORTHO05D006695 5.6e-185 652.1 626 68.8
Migut.G00755 Erythranthe guttata HOM05D005307 ORTHO05D006695 7.4e-185 651.7 619 64.9
MSTRG.4240 Avicennia marina HOM05D005307 ORTHO05D006695 1.3e-184 651.0 620 67.3
Cc03_g08380 Coffea canephora HOM05D005307 ORTHO05D006695 2.0e-182 643.7 628 68.8
CSS0004168 Camellia sinensis var. sinensis HOM05D005307 ORTHO05D006695 2.9e-181 639.8 609 69.0
Sed0024269 Sechium edule HOM05D005307 ORTHO05D006695 8.4e-181 638.3 608 70.1
Cfa014955 Carpinus fangiana HOM05D005307 ORTHO05D006695 4.2e-180 636.0 574 72.5
Actinidia35846 Actinidia chinensis HOM05D005307 ORTHO05D006695 4.6e-179 632.5 614 66.4
MELO3C006297.2 Cucumis melo HOM05D005307 ORTHO05D006695 3.0e-178 629.8 605 70.1
CsaV3_3G010790 Cucumis sativus L. HOM05D005307 ORTHO05D006695 6.7e-178 628.6 605 70.7
Manes.03G144900 Manihot esculenta HOM05D005307 ORTHO05D006695 4.8e-176 622.5 617 64.5
Nitab4.5_0000697g0080 Nicotiana tabacum HOM05D005307 ORTHO05D006695 4.8e-176 622.5 632 67.7
Nitab4.5_0002223g0040 Nicotiana tabacum HOM05D005307 ORTHO05D006695 6.2e-176 622.1 629 66.8
HanXRQChr01g0022201 Helianthus annuus HOM05D005307 ORTHO05D006695 1.5e-174 617.5 601 68.2
COL.COLO4_20217 Corchorus olitorius HOM05D005307 ORTHO05D006695 3.4e-174 616.3 644 63.8
ECA248G0158 Erigeron canadensis HOM05D005307 ORTHO05D006695 4.5e-174 615.9 604 67.2
PGSC0003DMG400024356 Solanum tuberosum HOM05D005307 ORTHO05D006695 4.5e-174 615.9 627 66.3
Eucgr.H02691 Eucalyptus grandis HOM05D005307 ORTHO05D006695 5.8e-174 615.5 582 65.1
Thecc.04G196200 Theobroma cacao HOM05D005307 ORTHO05D006695 7.6e-174 615.1 644 68.3
Glyma.08G109600 Glycine max HOM05D005307 ORTHO05D006695 6.5e-173 612.1 602 68.1
MD04G1016500 Malus domestica HOM05D005307 ORTHO05D006695 1.1e-172 611.3 603 64.5
TAR636G0868 Trochodendron aralioides HOM05D005307 ORTHO05D006695 1.1e-172 611.3 605 65.8
Prupe.1G163200 Prunus persica HOM05D005307 ORTHO05D006695 5.5e-172 609.0 610 62.8
Glyma.05G152900 Glycine max HOM05D005307 ORTHO05D006695 1.6e-171 607.4 598 68.2
Lsat_1_v5_gn_1_73301 Lactuca sativa HOM05D005307 ORTHO05D006695 1.6e-171 607.4 602 64.6
DCAR_005485 Daucus carota HOM05D005307 ORTHO05D006695 7.9e-171 605.1 603 63.8
SGA_v2.0_scaffold19G08778 Striga asiatica HOM05D005307 ORTHO05D006695 3.0e-170 603.2 624 66.5
GSVIVG01001478001 Vitis vinifera HOM05D005307 ORTHO05D006695 8.7e-170 601.7 610 66.1
Gorai.005G028400 Gossypium raimondii HOM05D005307 ORTHO05D006695 1.9e-169 600.5 658 64.6
Gohir.D02G023000 Gossypium hirsutum HOM05D005307 ORTHO05D006695 2.5e-169 600.1 658 64.9
Sabra17G0051900 Salix brachista HOM05D005307 ORTHO05D006695 4.3e-169 599.4 634 60.3
Lj4g0027601 Lotus japonicus HOM05D005307 ORTHO05D006695 2.8e-168 596.7 603 67.3
VMungo0251G3181 Vigna mungo HOM05D005307 ORTHO05D006695 3.7e-168 596.3 597 68.0
Potri.017G058300 Populus trichocarpa HOM05D005307 ORTHO05D006695 4.8e-168 595.9 624 58.7
Gorai.011G153100 Gossypium raimondii HOM05D005307 ORTHO05D006695 1.1e-167 594.7 632 61.2
Gohir.D10G137900 Gossypium hirsutum HOM05D005307 ORTHO05D006695 3.1e-167 593.2 632 61.2
Sabra16G0201900 Salix brachista HOM05D005307 ORTHO05D006695 4.1e-167 592.8 620 61.9
Gohir.A02G019700 Gossypium hirsutum HOM05D005307 ORTHO05D006695 6.9e-167 592.0 658 64.1
Ca_17978_v3 Cicer arietinum L. HOM05D005307 ORTHO05D006695 3.4e-166 589.7 593 64.8
Lj3C779T0 Lonicera japonica HOM05D005307 ORTHO05D006695 7.6e-166 588.6 618 59.4
Lalb_Chr12g0205581 Lupinus albus HOM05D005307 ORTHO05D006695 1.0e-165 588.2 600 65.0
TPR.G11920 Trifolium pratense HOM05D005307 ORTHO05D006695 1.3e-165 587.8 599 62.9
Potri.001G319000 Populus trichocarpa HOM05D005307 ORTHO05D006695 3.8e-165 586.3 571 65.7
Medtr8g081640 Medicago truncatula HOM05D005307 ORTHO05D006695 1.6e-163 580.9 599 63.1
Ciclev10004448m.g Citrus clementina HOM05D005307 ORTHO05D006695 2.7e-163 580.1 629 64.1
arahy.Tifrunner.gnm1.ann1.GBN5SF Arachis hypogaea HOM05D005307 ORTHO05D006695 2.3e-162 577.0 616 64.0
Gohir.A10G128100 Gossypium hirsutum HOM05D005307 ORTHO05D006695 6.7e-162 575.5 626 60.2
RcHm_v2.0_Chr4g0413751 Rosa chinensis HOM05D005307 ORTHO05D006695 1.1e-161 574.7 604 61.6
Atru.chr3.1814 Acer truncatum HOM05D005307 ORTHO05D006695 2.5e-161 573.5 631 62.3
arahy.Tifrunner.gnm1.ann1.C718TQ Arachis hypogaea HOM05D005307 ORTHO05D006695 2.5e-161 573.5 605 65.0
TAR365G0199 Trochodendron aralioides HOM05D005307 ORTHO05D006695 4.3e-161 572.8 618 59.4
EL10Ac3g07462 Beta vulgaris HOM05D005307 ORTHO05D006695 8.2e-160 568.5 625 63.5
Sed0018547 Sechium edule HOM05D005307 ORTHO05D006695 8.2e-160 568.5 568 68.7
THA.LOC104808701 Tarenaya hassleriana HOM05D005307 ORTHO05D006695 2.4e-159 567.0 614 66.6
ClCG05G003160 Citrullus lanatus HOM05D005307 ORTHO05D006695 1.5e-158 564.3 561 66.1
Eucgr.L00037 Eucalyptus grandis HOM05D005307 ORTHO05D006695 1.5e-158 564.3 582 61.7
Solyc09g092250.3 Solanum lycopersicum HOM05D005307 ORTHO05D006695 1.5e-158 564.3 625 62.9
Sopen09g035180 Solanum pennellii HOM05D005307 ORTHO05D006695 2.0e-158 563.9 625 62.9
FvH4_4g13380 Fragaria vesca HOM05D005307 ORTHO05D006695 1.7e-157 560.8 603 65.5
FAN17G0194 Fragaria x ananassa HOM05D005307 ORTHO05D006695 2.9e-157 560.1 603 65.5
FAN07G1190 Fragaria x ananassa HOM05D005307 ORTHO05D006695 3.8e-157 559.7 603 65.3
Psat7g074720 Pisum sativum HOM05D005307 ORTHO05D006695 3.8e-157 559.7 599 61.4
SHI06461 Sapria himalayana HOM05D005307 ORTHO05D006695 8.5e-157 558.5 617 56.1
FAN12G2903 Fragaria x ananassa HOM05D005307 ORTHO05D006695 1.4e-156 557.8 603 65.3
Thhalv10002398m.g Eutrema salsugineum HOM05D005307 ORTHO05D006695 7.2e-156 555.4 571 60.6
Sp3g21580 Schrenkiella parvula HOM05D005307 ORTHO05D006695 6.7e-154 548.9 581 59.2
FAN22G0006 Fragaria x ananassa HOM05D005307 ORTHO05D006695 8.8e-154 548.5 603 63.0
AL3G38890 Arabidopsis lyrata HOM05D005307 ORTHO05D006695 1.5e-153 547.7 608 60.9
AUR62020854 Chenopodium quinoa HOM05D005307 ORTHO05D006695 5.7e-153 545.8 625 62.9
PSO063G4654 Papaver somniferum HOM05D005307 ORTHO05D006695 5.7e-153 545.8 627 68.7
unitig_899.g14865 Utricularia gibba HOM05D005307 ORTHO05D006695 3.7e-152 543.1 511 65.6
Nn1g08214 Nelumbo nucifera HOM05D005307 ORTHO05D006695 4.8e-152 542.7 600 64.8
Aqoxy2G03944 Aquilegia oxysepala HOM05D005307 ORTHO05D006695 6.3e-152 542.3 612 61.6
Peaxi162Scf00047g00141 Petunia axillaris HOM05D005307 ORTHO05D006695 6.3e-152 542.3 630 62.1
PSO017G6801 Papaver somniferum HOM05D005307 ORTHO05D006695 8.2e-152 542.0 631 68.3
vmacro00443 Vaccinium macrocarpon HOM05D005307 ORTHO05D006695 5.3e-151 539.3 631 59.4
Sc13g0000330 Simmondsia chinensis HOM05D005307 ORTHO05D006695 6.9e-151 538.9 642 55.3
CARHR099860 Cardamine hirsuta HOM05D005307 ORTHO05D006695 2.6e-150 537.0 621 57.3
AUR62018565 Chenopodium quinoa HOM05D005307 ORTHO05D006695 2.6e-150 537.0 624 57.7
AT3G23900 Arabidopsis thaliana HOM05D005307 ORTHO05D006695 3.2e-148 530.0 615 56.3
CAN.G1155.22 Capsicum annuum HOM05D005307 ORTHO05D006695 5.5e-148 529.3 529 68.6
BcaB06g26551 Brassica carinata HOM05D005307 ORTHO05D006695 6.1e-147 525.8 573 56.2
CDE05G3407 Ceratophyllum demersum HOM05D005307 ORTHO05D006695 1.5e-145 521.2 518 64.9
BraA07t28636Z Brassica rapa HOM05D005307 ORTHO05D006695 2.0e-145 520.8 506 59.7
C07p13250 Brassica napus HOM05D005307 ORTHO05D006695 2.6e-145 520.4 511 59.1
BolC7t41817H Brassica oleracea HOM05D005307 ORTHO05D006695 2.6e-145 520.4 511 59.1
BcaC06g35584 Brassica carinata HOM05D005307 ORTHO05D006695 7.4e-145 518.8 511 58.9
ATR0561G218 Amborella trichopoda HOM05D005307 ORTHO05D006695 9.7e-145 518.5 626 56.9
A07p08510 Brassica napus HOM05D005307 ORTHO05D006695 4.8e-144 516.2 506 59.5
HPP92_024208 Vanilla planifolia HOM05D005307 ORTHO05D006695 4.8e-144 516.2 604 57.5
CDE05G2932 Ceratophyllum demersum HOM05D005307 ORTHO05D006695 4.1e-143 513.1 612 60.3
Phvul.003G050400 Phaseolus vulgaris HOM05D005307 ORTHO05D006695 5.3e-143 512.7 597 58.1
Carub.0003s2420 Capsella rubella HOM05D005307 ORTHO05D006695 4.5e-142 509.6 608 56.7
Aa31LG8G10470 Aethionema arabicum HOM05D005307 ORTHO05D006695 2.2e-141 507.3 600 57.3
Lalb_Chr07g0186791 Lupinus albus HOM05D005307 ORTHO05D006695 3.8e-125 453.4 579 58.0
CiPaw.01G117700 Carya illinoinensis HOM05D005307 ORTHO05D006695 1.6e-118 431.4 440 68.4
SalBow8G0142 Salvia bowleyana HOM05D005307 ORTHO05D006695 7.5e-113 412.5 295 74.2
Zm00001eb127130 Zea mays HOM05D005307 ORTHO05D006695 2.4e-111 407.5 517 59.2
Cpa.g.sc83.42 Carica papaya HOM05D005307 ORTHO05D006695 1.7e-109 401.4 429 69.2
Zm00001eb334080 Zea mays HOM05D005307 ORTHO05D006695 2.3e-109 401.0 611 54.2
Os01g0101600 Oryza sativa ssp. japonica HOM05D005307 ORTHO05D006695 3.3e-100 370.5 611 50.4
MBI07_g27653_MAGBIO Magnolia biondii HOM05D005307 ORTHO05D006695 2.1e-94 351.3 284 63.0
TAR625G1365 Trochodendron aralioides HOM05D005307 ORTHO05D006695 2.1e-78 298.1 202 73.8
SalBow8G1782 Salvia bowleyana HOM05D005307 ORTHO05D006695 1.9e-76 291.6 274 69.0
CBR_g48000 Chara braunii HOM05D005307 ORTHO05D006695 2.6e-73 281.2 537 45.8
Mapoly0002s0028 Marchantia polymorpha HOM05D005307 ORTHO05D006695 3.2e-71 274.2 511 42.1
Pp3c24_4280 Physcomitrium patens HOM05D005307 ORTHO05D006695 5.6e-68 263.5 508 48.4
Pp3c8_5960 Physcomitrium patens HOM05D005307 ORTHO05D006695 1.5e-65 255.4 506 48.0
Actinidia33177 Actinidia chinensis HOM05D005307 ORTHO05D006695 3.5e-62 244.2 275 63.6
Lj3A756G29 Lonicera japonica HOM05D005307 ORTHO05D006695 1.0e-61 242.7 264 67.4
Hund24403 Selenicereus undatus HOM05D005307 ORTHO05D006695 1.5e-57 228.8 180 66.7
C01p39750 Brassica napus HOM05D005307 ORTHO05D006695 6.5e-56 223.4 527 39.5
BolC1t03929H Brassica oleracea HOM05D005307 ORTHO05D006695 5.5e-55 220.3 334 51.5
Cpa.g.sc83.41 Carica papaya HOM05D005307 ORTHO05D006695 5.7e-52 210.3 190 61.6
SEGI_03012 Sequoiadendron giganteum HOM05D005307 ORTHO05D006695 1.8e-50 205.3 217 51.6
A01p31200 Brassica napus HOM05D005307 ORTHO05D006695 1.3e-48 199.1 274 52.2
arahy.Tifrunner.gnm1.ann1.K4I8TV Arachis hypogaea HOM05D005307 ORTHO05D006695 3.9e-45 187.6 204 60.3
BcaC03g15749 Brassica carinata HOM05D005307 ORTHO05D006695 3.3e-20 104.8 88 58.0
arahy.Tifrunner.gnm1.ann1.H01PAW Arachis hypogaea HOM05D005307 ORTHO05D006695 4.4e-20 104.4 58 86.2
BolC2t09503H Brassica oleracea HOM05D005307 ORTHO05D006695 8.3e-19 100.1 86 59.3
Lj3A756G30 Lonicera japonica HOM05D005307 ORTHO05D006695 5.3e-18 97.4 71 70.4
BraA02t07151Z Brassica rapa HOM05D005307 ORTHO05D027550 5.9e-17 94.0 238 40.8
Cre16.g672150 Chlamydomonas reinhardtii HOM05D005307 ORTHO05D006695 1.0e-16 93.2 388 36.3
Actinidia33176 Actinidia chinensis HOM05D005307 ORTHO05D006695 4.2e-15 87.8 150 47.3
BolC2t09502H Brassica oleracea HOM05D005307 ORTHO05D006695 4.7e-14 84.3 97 51.5
MCO02G402 Micromonas commoda HOM05D005307 ORTHO05D006695 6.1e-14 84.0 428 25.7
BraA02t07152Z Brassica rapa HOM05D005307 ORTHO05D006695 4.0e-13 81.3 104 47.1
Lj3C756T3 Lonicera japonica HOM05D005307 ORTHO05D006695 5.7e-12 77.4 92 55.4
C02p34830 Brassica napus HOM05D005307 ORTHO05D006695 2.2e-11 75.5 104 47.1
C02p34840 Brassica napus HOM05D005307 ORTHO05D027550 2.8e-11 75.1 239 36.0
arahy.Tifrunner.gnm1.ann1.6LH71N Arachis hypogaea HOM05D005307 ORTHO05D006695 2.7e-09 68.6 140 53.6
Psat7g074680 Pisum sativum HOM05D005307 ORTHO05D006695 7.7e-09 67.0 87 50.6
arahy.Tifrunner.gnm1.ann1.V8QUIX Arachis hypogaea HOM05D000659 ORTHO05D006695 2.5e-07 62.0 75 61.3
MCO15G151 Micromonas commoda HOM05D014086 ORTHO05D268203 6.1e-06 57.4 81 43.2


User provided reference genes

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