Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 6.0e-33 143.7 76 100.0
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 1.5e-23 112.5 74 78.4
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 1.2e-22 109.4 74 79.7
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 2.8e-22 108.2 74 74.3
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 8.1e-22 106.7 74 74.3
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.3e-21 105.1 70 75.7
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.3e-21 105.1 74 73.0
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 2.3e-21 105.1 74 73.0
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 2.3e-21 105.1 74 74.3
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 5.2e-21 104.0 74 71.6
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 5.2e-21 104.0 74 74.3
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 1.2e-20 102.8 74 71.6
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 2.0e-20 102.1 74 68.9
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 2.0e-20 102.1 74 71.6
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 2.0e-20 102.1 69 76.8
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 2.0e-20 102.1 74 71.6
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 2.6e-20 101.7 74 70.3
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 4.4e-20 100.9 74 71.6
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 9.9e-20 99.8 74 68.9
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 2.9e-19 98.2 74 67.6
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 2.9e-19 98.2 74 67.6
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 2.9e-19 98.2 74 66.2
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 3.7e-19 97.8 74 66.2
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 4.9e-19 97.4 74 66.2
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 6.4e-19 97.1 74 64.9
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 8.3e-19 96.7 74 64.9
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 8.3e-19 96.7 74 64.9
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 8.3e-19 96.7 74 64.9
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 8.3e-19 96.7 87 62.1
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 8.3e-19 96.7 74 67.6
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 8.3e-19 96.7 74 66.2
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 8.3e-19 96.7 74 66.2
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 8.3e-19 96.7 74 66.2
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 1.1e-18 96.3 74 64.9
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.1e-18 96.3 74 64.9
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 1.1e-18 96.3 76 65.8
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 1.1e-18 96.3 74 64.9
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.4e-18 95.9 74 64.9
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 1.4e-18 95.9 74 64.9
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 1.4e-18 95.9 74 64.9
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 1.4e-18 95.9 74 64.9
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 1.4e-18 95.9 74 64.9
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.9e-18 95.5 74 63.5
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 1.9e-18 95.5 74 66.2
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.4e-18 95.1 74 63.5
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 2.4e-18 95.1 74 64.9
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 3.2e-18 94.7 74 64.9
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 3.2e-18 94.7 76 64.5
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 3.2e-18 94.7 74 63.5
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 4.1e-18 94.4 74 66.2
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 4.1e-18 94.4 74 63.5
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 4.1e-18 94.4 74 63.5
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 4.1e-18 94.4 74 63.5
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.1e-18 94.4 74 67.6
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 5.4e-18 94.0 74 62.2
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 5.4e-18 94.0 74 63.5
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 5.4e-18 94.0 74 63.5
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 5.4e-18 94.0 74 63.5
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 5.4e-18 94.0 74 63.5
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 7.1e-18 93.6 74 62.2
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 7.1e-18 93.6 74 64.9
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 7.1e-18 93.6 74 66.2
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 7.1e-18 93.6 74 63.5
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 7.1e-18 93.6 74 66.2
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 9.2e-18 93.2 74 64.9
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 9.2e-18 93.2 74 62.2
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 1.2e-17 92.8 78 62.8
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 1.2e-17 92.8 74 60.8
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 1.2e-17 92.8 76 67.1
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 2.1e-17 92.0 74 63.5
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 2.1e-17 92.0 74 64.9
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 2.7e-17 91.7 74 60.8
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 3.5e-17 91.3 74 62.2
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 3.5e-17 91.3 74 64.9
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 3.5e-17 91.3 74 64.9
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 3.5e-17 91.3 74 64.9
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 3.5e-17 91.3 74 62.2
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 3.5e-17 91.3 74 62.2
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 4.6e-17 90.9 74 62.2
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 6.0e-17 90.5 74 59.5
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 6.0e-17 90.5 74 59.5
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 6.0e-17 90.5 74 59.5
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 6.0e-17 90.5 74 59.5
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 6.0e-17 90.5 74 59.5
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 6.0e-17 90.5 74 59.5
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 6.0e-17 90.5 75 62.7
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 6.0e-17 90.5 74 59.5
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 7.8e-17 90.1 74 63.5
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 7.8e-17 90.1 73 67.1
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 7.8e-17 90.1 74 60.8
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 1.0e-16 89.7 74 58.1
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.0e-16 89.7 73 67.1
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 1.0e-16 89.7 76 61.8
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 1.0e-16 89.7 74 62.2
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.0e-16 89.7 74 66.2
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 1.0e-16 89.7 74 63.5
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 1.0e-16 89.7 74 63.5
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 1.0e-16 89.7 74 63.5
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 2.3e-16 88.6 74 58.1
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 2.3e-16 88.6 74 58.1
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 2.3e-16 88.6 74 59.5
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 2.3e-16 88.6 76 63.2
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 2.3e-16 88.6 75 60.0
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 3.0e-16 88.2 74 58.1
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 3.0e-16 88.2 73 67.1
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 3.9e-16 87.8 74 63.5
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 5.1e-16 87.4 74 58.1
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 6.6e-16 87.0 74 56.8
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 8.6e-16 86.7 73 60.3
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 8.6e-16 86.7 74 56.8
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 8.6e-16 86.7 74 60.8
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 8.6e-16 86.7 74 60.8
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 8.6e-16 86.7 74 60.8
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.5e-15 85.9 74 60.8
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 1.5e-15 85.9 74 60.8
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.9e-15 85.5 74 60.8
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 2.5e-15 85.1 73 60.3
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.5e-15 85.1 74 59.5
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.3e-15 84.7 74 59.5
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 4.3e-15 84.3 74 59.5
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 4.3e-15 84.3 74 60.8
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.3e-15 84.3 74 59.5
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 4.3e-15 84.3 74 59.5
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 5.6e-15 84.0 75 61.3
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 7.3e-15 83.6 74 59.5
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 7.3e-15 83.6 74 60.8
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 7.3e-15 83.6 73 61.6
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 9.5e-15 83.2 87 57.5
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.2e-14 82.8 74 58.1
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 1.2e-14 82.8 75 62.7
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.6e-14 82.4 74 59.5
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 1.6e-14 82.4 73 60.3
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 2.8e-14 81.6 73 60.3
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.8e-14 81.6 76 60.5
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 4.7e-14 80.9 73 56.2
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 4.7e-14 80.9 71 57.7
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 8.1e-14 80.1 76 56.6
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.8e-13 79.0 74 59.5
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 6.8e-13 77.0 74 56.8
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 6.8e-13 77.0 74 56.8
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 6.8e-13 77.0 74 56.8
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 1.2e-12 76.3 76 52.6
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 1.2e-12 76.3 76 52.6
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 1.5e-12 75.9 55 69.1
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 2.0e-12 75.5 95 45.3
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 5.8e-12 73.9 74 54.1
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 9.9e-12 73.2 57 64.9
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 1.9e-10 68.9 75 46.7
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 3.2e-10 68.2 70 51.4
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 3.2e-10 68.2 56 58.9
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 3.2e-10 68.2 67 55.2
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 9.2e-10 66.6 65 47.7
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.2e-09 66.2 74 48.6
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 1.6e-09 65.9 76 48.7
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 4.6e-09 64.3 55 56.4
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 6.0e-09 63.9 65 52.3
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 6.0e-09 63.9 65 52.3
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 6.0e-09 63.9 74 44.6
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.0e-08 63.2 55 61.8
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.9e-08 61.2 55 60.0
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 5.1e-08 60.8 73 47.9
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 2.5e-07 58.5 54 50.0
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 9.6e-07 56.6 51 56.9
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 2.8e-06 55.1 69 42.0
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 3.6e-06 54.7 69 42.0


User provided reference genes

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