Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042264.1 Olea europaea HOM05D004035 ORTHO05D004631 0.0e+00 1086.6 570 100.0
SGA_v2.0_scaffold276G46626 Striga asiatica HOM05D004035 ORTHO05D004631 1.2e-231 806.6 554 77.8
Migut.H00988 Erythranthe guttata HOM05D004035 ORTHO05D004631 1.4e-230 803.1 532 79.9
SalBow8G0583 Salvia bowleyana HOM05D004035 ORTHO05D004631 1.3e-225 786.6 533 77.7
CSS0025574 Camellia sinensis var. sinensis HOM05D004035 ORTHO05D004631 7.2e-224 780.8 567 75.7
Dinv39986 Davidia involucrata HOM05D004035 ORTHO05D004631 1.2e-223 780.0 536 77.8
Nitab4.5_0000178g0040 Nicotiana tabacum HOM05D004035 ORTHO05D004631 3.6e-223 778.5 534 77.5
Solyc07g056660.4 Solanum lycopersicum HOM05D004035 ORTHO05D004631 3.6e-223 778.5 534 77.5
Sopen07g030000 Solanum pennellii HOM05D004035 ORTHO05D004631 4.7e-223 778.1 534 77.5
Cc03_g03620 Coffea canephora HOM05D004035 ORTHO05D004631 8.0e-223 777.3 533 77.3
Peaxi162Scf00366g00121 Petunia axillaris HOM05D004035 ORTHO05D004631 8.8e-222 773.9 526 77.9
Lj2C453G20 Lonicera japonica HOM05D004035 ORTHO05D004631 1.3e-220 770.0 539 76.4
Nitab4.5_0001385g0050 Nicotiana tabacum HOM05D004035 ORTHO05D004631 3.7e-220 768.5 534 77.0
CAN.G1003.4 Capsicum annuum HOM05D004035 ORTHO05D004631 2.4e-219 765.8 534 76.8
Actinidia12124 Actinidia chinensis HOM05D004035 ORTHO05D004631 1.2e-218 763.5 538 76.4
Hma1.2p1_0400F.1_g144430 Hydrangea macrophylla HOM05D004035 ORTHO05D004631 4.5e-218 761.5 538 76.6
Actinidia36560 Actinidia chinensis HOM05D004035 ORTHO05D004631 1.5e-216 756.5 538 75.8
CANSAT01G0227 Cannabis sativa HOM05D004035 ORTHO05D004631 3.2e-216 755.4 534 76.0
PGSC0003DMG400003507 Solanum tuberosum HOM05D004035 ORTHO05D004631 2.7e-215 752.3 534 75.1
Solyc02g085220.4 Solanum lycopersicum HOM05D004035 ORTHO05D004631 8.0e-215 750.7 534 75.1
Sopen02g029920 Solanum pennellii HOM05D004035 ORTHO05D004631 1.4e-214 750.0 534 74.9
Sed0003321 Sechium edule HOM05D004035 ORTHO05D004631 4.0e-214 748.4 561 71.7
GSVIVG01018960001 Vitis vinifera HOM05D004035 ORTHO05D004631 2.0e-213 746.1 535 74.6
Eucgr.H01269 Eucalyptus grandis HOM05D004035 ORTHO05D004631 9.8e-213 743.8 535 74.6
Manes.02G093700 Manihot esculenta HOM05D004035 ORTHO05D004631 1.7e-212 743.0 534 74.0
CiPaw.01G038000 Carya illinoinensis HOM05D004035 ORTHO05D004631 4.8e-212 741.5 570 70.7
Rhsim02G0182400 Rhododendron simsii HOM05D004035 ORTHO05D004631 5.4e-211 738.0 537 74.1
COL.COLO4_22081 Corchorus olitorius HOM05D004035 ORTHO05D004631 9.1e-211 737.3 534 73.8
Haze_15090 Corylus avellana HOM05D004035 ORTHO05D004631 1.2e-210 736.9 567 70.4
Thecc.01G133800 Theobroma cacao HOM05D004035 ORTHO05D004631 1.2e-210 736.9 533 73.5
Ciclev10024797m.g Citrus clementina HOM05D004035 ORTHO05D004631 1.6e-210 736.5 538 74.5
ClCG07G009230 Citrullus lanatus HOM05D004035 ORTHO05D004631 2.0e-210 736.1 561 70.4
PGR102G3072 Punica granatum HOM05D004035 ORTHO05D004631 2.0e-210 736.1 567 69.8
Atru.chr3.574 Acer truncatum HOM05D004035 ORTHO05D004631 2.7e-210 735.7 568 70.4
Cfa004306 Carpinus fangiana HOM05D004035 ORTHO05D004631 7.7e-210 734.2 538 73.0
CsaV3_UNG172360 Cucumis sativus L. HOM05D004035 ORTHO05D004631 1.0e-209 733.8 561 70.8
MELO3C017565.2 Cucumis melo HOM05D004035 ORTHO05D004631 1.3e-209 733.4 562 70.6
QL06p046086 Quercus lobata HOM05D004035 ORTHO05D004631 2.9e-209 732.3 566 70.1
Duzib147G1708 Durio zibethinus HOM05D004035 ORTHO05D004631 8.5e-209 730.7 547 72.6
MD15G1261900 Malus domestica HOM05D004035 ORTHO05D004631 8.5e-209 730.7 535 72.7
Potri.005G123000 Populus trichocarpa HOM05D004035 ORTHO05D004631 8.5e-209 730.7 535 73.1
MD02G1147600 Malus domestica HOM05D004035 ORTHO05D004631 5.5e-208 728.0 533 72.8
Gohir.D11G190900 Gossypium hirsutum HOM05D004035 ORTHO05D004631 1.6e-207 726.5 535 73.1
Prupe.7G154500 Prunus persica HOM05D004035 ORTHO05D004631 1.6e-207 726.5 530 73.0
Gohir.A11G184400 Gossypium hirsutum HOM05D004035 ORTHO05D004631 2.1e-207 726.1 535 72.7
Potri.007G025700 Populus trichocarpa HOM05D004035 ORTHO05D004631 2.1e-207 726.1 567 69.7
Nn1g04984 Nelumbo nucifera HOM05D004035 ORTHO05D004631 2.7e-207 725.7 531 72.1
vmacro11086 Vaccinium macrocarpon HOM05D004035 ORTHO05D004631 6.1e-207 724.5 558 70.6
TAR376G0366 Trochodendron aralioides HOM05D004035 ORTHO05D004631 8.0e-207 724.2 564 69.0
Gorai.007G203400 Gossypium raimondii HOM05D004035 ORTHO05D004631 1.0e-206 723.8 535 72.7
HanXRQChr16g0530441 Helianthus annuus HOM05D004035 ORTHO05D004631 1.4e-206 723.4 530 74.2
FAN26G1872 Fragaria x ananassa HOM05D004035 ORTHO05D004631 5.2e-206 721.5 537 72.4
RcHm_v2.0_Chr2g0101581 Rosa chinensis HOM05D004035 ORTHO05D004631 5.2e-206 721.5 539 72.5
TWI73G0243 Tripterygium wilfordii HOM05D004035 ORTHO05D004631 1.5e-205 719.9 535 72.3
FvH4_1g13311 Fragaria vesca HOM05D004035 ORTHO05D004631 2.6e-205 719.2 537 71.9
Ca_24847_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 3.7e-204 715.3 533 71.1
FAN28G2497 Fragaria x ananassa HOM05D004035 ORTHO05D004631 6.3e-204 714.5 537 71.5
Sabra07G0022700 Salix brachista HOM05D004035 ORTHO05D004631 1.8e-203 713.0 565 70.1
ECA246G3379 Erigeron canadensis HOM05D004035 ORTHO05D004631 3.1e-203 712.2 532 71.6
AUR62004050 Chenopodium quinoa HOM05D004035 ORTHO05D004631 1.2e-202 710.3 533 70.9
AUR62007565 Chenopodium quinoa HOM05D004035 ORTHO05D004631 1.0e-201 707.2 533 70.4
Lj2g0023524 Lotus japonicus HOM05D004035 ORTHO05D004631 1.5e-200 703.4 533 70.5
Glyma.01G176000 Glycine max HOM05D004035 ORTHO05D004631 7.3e-200 701.0 532 70.1
VMungo1215G2866 Vigna mungo HOM05D004035 ORTHO05D004631 3.6e-199 698.7 538 69.5
Glyma.11G068300 Glycine max HOM05D004035 ORTHO05D004631 1.8e-198 696.4 532 69.7
EL10Ac6g15563 Beta vulgaris HOM05D004035 ORTHO05D004631 3.0e-198 695.7 533 70.0
TPR.G22289 Trifolium pratense HOM05D004035 ORTHO05D004631 3.0e-198 695.7 534 70.0
Aqoxy6G01113 Aquilegia oxysepala HOM05D004035 ORTHO05D004631 4.0e-198 695.3 531 69.3
Phvul.002G030300 Phaseolus vulgaris HOM05D004035 ORTHO05D004631 4.0e-198 695.3 538 69.3
Ah.02g125200 Amaranthus hybridus HOM05D004035 ORTHO05D004631 8.9e-198 694.1 533 70.4
Psat2g159680 Pisum sativum HOM05D004035 ORTHO05D004631 2.0e-197 693.0 533 70.4
FAN19G0080 Fragaria x ananassa HOM05D004035 ORTHO05D004631 5.7e-197 691.4 537 70.2
Lalb_Chr16g0388281 Lupinus albus HOM05D004035 ORTHO05D004631 1.3e-196 690.3 532 68.6
MBI07_g11484_MAGBIO Magnolia biondii HOM05D004035 ORTHO05D004631 4.9e-196 688.3 536 69.8
DCAR_025943 Daucus carota HOM05D004035 ORTHO05D004631 1.8e-195 686.4 538 68.0
unitig_52.g17587 Utricularia gibba HOM05D004035 ORTHO05D004631 3.2e-195 685.6 521 69.7
Lalb_Chr09g0322391 Lupinus albus HOM05D004035 ORTHO05D004631 1.2e-194 683.7 543 70.5
Lsat_1_v5_gn_3_76401 Lactuca sativa HOM05D004035 ORTHO05D004631 3.0e-193 679.1 524 69.5
PSO675G4195 Papaver somniferum HOM05D004035 ORTHO05D004631 2.5e-192 676.0 536 67.0
arahy.Tifrunner.gnm1.ann1.GM6JEQ Arachis hypogaea HOM05D004035 ORTHO05D004631 5.6e-192 674.9 533 68.3
arahy.Tifrunner.gnm1.ann1.6E6Z42 Arachis hypogaea HOM05D004035 ORTHO05D004631 9.5e-192 674.1 533 68.1
PSO541G3635 Papaver somniferum HOM05D004035 ORTHO05D004631 1.2e-191 673.7 566 64.7
Lsat_1_v5_gn_4_152080 Lactuca sativa HOM05D004035 ORTHO05D004631 5.2e-190 668.3 535 66.7
Ca_22279_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 8.9e-190 667.5 563 63.1
Ca_22265_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 2.6e-189 666.0 531 65.9
LjContig00448g0016984 Lotus japonicus HOM05D004035 ORTHO05D004631 2.6e-189 666.0 531 67.6
Psat4g092560 Pisum sativum HOM05D004035 ORTHO05D004631 3.7e-188 662.1 531 66.9
Gorai.003G015100 Gossypium raimondii HOM05D004035 ORTHO05D004631 4.1e-187 658.7 531 66.9
arahy.Tifrunner.gnm1.ann1.JC6DGE Arachis hypogaea HOM05D004035 ORTHO05D004631 5.4e-187 658.3 535 65.4
TPR.G34978 Trifolium pratense HOM05D004035 ORTHO05D004631 7.0e-187 657.9 531 65.0
Lj1g0016074 Lotus japonicus HOM05D004035 ORTHO05D004631 1.6e-186 656.8 534 67.0
DCAR_017291 Daucus carota HOM05D004035 ORTHO05D004631 7.8e-186 654.4 489 72.8
arahy.Tifrunner.gnm1.ann1.ZDS5RA Arachis hypogaea HOM05D004035 ORTHO05D004631 1.7e-185 653.3 534 65.5
Medtr8g077680 Medicago truncatula HOM05D004035 ORTHO05D004631 1.1e-184 650.6 553 63.8
AL7G14420 Arabidopsis lyrata HOM05D004035 ORTHO05D004631 2.1e-183 646.4 560 63.8
TAR362G0832 Trochodendron aralioides HOM05D004035 ORTHO05D004631 2.8e-183 646.0 519 68.0
HanXRQChr09g0261471 Helianthus annuus HOM05D004035 ORTHO05D004631 8.1e-183 644.4 538 63.4
A03p64370 Brassica napus HOM05D004035 ORTHO05D004631 1.4e-182 643.7 559 63.0
BraA03t15502Z Brassica rapa HOM05D004035 ORTHO05D004631 2.3e-182 642.9 559 63.0
Carub.0007s0370 Capsella rubella HOM05D004035 ORTHO05D004631 3.1e-182 642.5 560 63.4
BolC7t46602H Brassica oleracea HOM05D004035 ORTHO05D004631 5.2e-182 641.7 559 62.6
C07p61810 Brassica napus HOM05D004035 ORTHO05D004631 6.8e-182 641.3 559 62.6
Nn7g37554 Nelumbo nucifera HOM05D004035 ORTHO05D004631 6.8e-182 641.3 526 65.8
CARHR244970 Cardamine hirsuta HOM05D004035 ORTHO05D004631 2.6e-181 639.4 559 62.4
AT4G36630 Arabidopsis thaliana HOM05D004035 ORTHO05D004631 5.8e-181 638.3 531 65.3
Thhalv10024305m.g Eutrema salsugineum HOM05D004035 ORTHO05D004631 7.5e-181 637.9 560 63.4
Sp7g34290 Schrenkiella parvula HOM05D004035 ORTHO05D004631 9.8e-181 637.5 560 63.0
ECA232G2840 Erigeron canadensis HOM05D004035 ORTHO05D004631 2.2e-180 636.3 520 65.4
Aa31LG6G13430 Aethionema arabicum HOM05D004035 ORTHO05D004631 4.3e-176 622.1 544 62.3
RcHm_v2.0_Chr2g0101111 Rosa chinensis HOM05D004035 ORTHO05D004631 2.0e-173 613.2 465 71.4
Gohir.D03G014800 Gossypium hirsutum HOM05D004035 ORTHO05D004631 7.6e-173 611.3 531 63.3
PSO017G4184 Papaver somniferum HOM05D004035 ORTHO05D004631 1.6e-170 603.6 517 63.2
PSO837G0008 Papaver somniferum HOM05D004035 ORTHO05D004631 1.1e-168 597.4 535 61.5
ATR0743G236 Amborella trichopoda HOM05D004035 ORTHO05D004631 8.1e-167 591.3 530 60.9
BcaC01g00456 Brassica carinata HOM05D004035 ORTHO05D004631 1.2e-165 587.4 536 60.6
CDE09G0689 Ceratophyllum demersum HOM05D004035 ORTHO05D004631 9.9e-165 584.3 528 59.3
CAN.G358.86 Capsicum annuum HOM05D004035 ORTHO05D004631 1.3e-161 573.9 533 61.4
Os03g0715500 Oryza sativa ssp. japonica HOM05D004035 ORTHO05D004631 2.5e-160 569.7 520 58.8
Sc03g0002970 Simmondsia chinensis HOM05D004035 ORTHO05D004631 2.1e-159 566.6 441 69.4
Zm00001eb055180 Zea mays HOM05D004035 ORTHO05D004631 1.9e-155 553.5 530 56.8
Thecc.01G035900 Theobroma cacao HOM05D004035 ORTHO05D004631 2.4e-155 553.1 417 71.9
SEGI_13313 Sequoiadendron giganteum HOM05D004035 ORTHO05D004631 1.3e-148 530.8 536 57.1
Medtr5g020140 Medicago truncatula HOM05D004035 ORTHO05D004631 7.9e-146 521.5 533 57.4
Cpa.g.sc1294.1 Carica papaya HOM05D004035 ORTHO05D004631 1.8e-142 510.4 407 68.3
CsaV3_4G004990 Cucumis sativus L. HOM05D004035 ORTHO05D004631 5.0e-132 475.7 338 74.3
A08p22280 Brassica napus HOM05D004035 ORTHO05D004631 7.7e-117 425.2 324 67.9
Gohir.A02G165200 Gossypium hirsutum HOM05D004035 ORTHO05D004631 3.9e-113 412.9 280 75.0
Mapoly0160s0027 Marchantia polymorpha HOM05D004035 ORTHO05D004631 1.1e-110 404.8 524 45.2
AagrBONN_evm.TU.Sc2ySwM_340.480 Anthoceros agrestis HOM05D004035 ORTHO05D004631 9.1e-110 401.7 532 45.1
PGSC0003DMG400027646 Solanum tuberosum HOM05D004035 ORTHO05D004631 8.2e-103 378.6 283 73.9
Pp3c10_5300 Physcomitrium patens HOM05D004035 ORTHO05D004631 1.6e-98 364.4 538 42.2
BolC3t20257H Brassica oleracea HOM05D004035 ORTHO05D004631 2.3e-97 360.5 413 51.8
C03p80030 Brassica napus HOM05D004035 ORTHO05D004631 5.2e-97 359.4 413 51.8
BraA08t34187Z Brassica rapa HOM05D004035 ORTHO05D004631 1.2e-96 358.2 273 67.4
HPP92_004247 Vanilla planifolia HOM05D004035 ORTHO05D004631 2.1e-90 337.4 405 49.4
SMO145G0075 Selaginella moellendorffii HOM05D004035 ORTHO05D004631 2.3e-84 317.4 520 37.7
Oeu033646.1 Olea europaea HOM05D004035 ORTHO05D004631 2.0e-48 198.0 515 34.2
CsaV3_4G004980 Cucumis sativus L. HOM05D004035 ORTHO05D004631 1.1e-43 182.2 206 53.9
Oeu009413.1 Olea europaea HOM05D004035 ORTHO05D004631 5.4e-38 163.3 343 37.6
Cpa.g.sc1294.3 Carica papaya HOM05D004035 ORTHO05D004631 3.9e-36 157.1 110 71.8
CBR_g34968 Chara braunii HOM05D004035 ORTHO05D004631 5.5e-30 136.7 871 21.0
ATR0800G151 Amborella trichopoda HOM05D004035 ORTHO05D004631 9.6e-27 125.9 196 40.3
SHI32099 Sapria himalayana HOM05D004035 ORTHO05D004631 2.1e-26 124.8 113 59.3
Thecc.01G036000 Theobroma cacao HOM05D004035 ORTHO05D004631 1.1e-25 122.5 86 73.3
SHI32100 Sapria himalayana HOM05D004035 ORTHO05D000001 1.8e-25 121.7 94 64.9
TPR.G13595 Trifolium pratense HOM05D004035 ORTHO05D004631 3.1e-25 120.9 141 54.6
TPR.G13585 Trifolium pratense HOM05D004035 ORTHO05D004631 1.5e-24 118.6 252 37.7
C03p80040 Brassica napus HOM05D004035 ORTHO05D004631 2.5e-19 101.3 118 50.8
BolC3t20258H Brassica oleracea HOM05D004035 ORTHO05D004631 2.5e-19 101.3 118 50.8
PRCOL_00006719 Prasinoderma coloniale HOM05D004035 ORTHO05D004631 4.8e-18 97.1 524 24.4
RcHm_v2.0_Chr2g0101101 Rosa chinensis HOM05D004035 ORTHO05D004631 9.3e-14 82.8 51 80.4
Duzib264G0986 Durio zibethinus HOM05D004035 ORTHO05D004631 4.8e-10 70.5 46 76.1
Cre06.g278124 Chlamydomonas reinhardtii HOM05D004035 ORTHO05D004631 6.3e-10 70.1 124 33.9
Medtr8g072800 Medicago truncatula HOM05D004035 ORTHO05D004631 9.1e-09 66.2 59 54.2


User provided reference genes

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