Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040636.1 Olea europaea HOM05D000880 ORTHO05D017463 3.2e-56 221.5 108 100.0
Oeu054121.1 Olea europaea HOM05D000880 ORTHO05D007053 1.5e-34 149.4 107 74.8
SalBow3G0448 Salvia bowleyana HOM05D000880 ORTHO05D007053 3.9e-30 134.8 107 66.4
DCAR_018329 Daucus carota HOM05D000880 ORTHO05D007053 1.1e-29 133.3 107 64.5
PGSC0003DMG400031813 Solanum tuberosum HOM05D000880 ORTHO05D007053 2.5e-29 132.1 107 66.4
CSS0009761 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D007053 4.3e-29 131.3 107 65.4
Actinidia01490 Actinidia chinensis HOM05D000880 ORTHO05D007053 5.7e-29 131.0 107 66.4
Cc01_g20910 Coffea canephora HOM05D000880 ORTHO05D007053 7.4e-29 130.6 107 62.6
Migut.D00148 Erythranthe guttata HOM05D000880 ORTHO05D007053 7.4e-29 130.6 107 64.5
Dinv02562 Davidia involucrata HOM05D000880 ORTHO05D007053 1.3e-28 129.8 107 64.5
Solyc09g075190.3 Solanum lycopersicum HOM05D000880 ORTHO05D007053 1.7e-28 129.4 107 64.5
Nitab4.5_0002433g0080 Nicotiana tabacum HOM05D000880 ORTHO05D007053 2.2e-28 129.0 107 64.5
Sopen09g030010 Solanum pennellii HOM05D000880 ORTHO05D007053 2.2e-28 129.0 107 63.6
Lj2A1196G44 Lonicera japonica HOM05D000880 ORTHO05D007053 2.8e-28 128.6 107 62.6
MSTRG.9184 Avicennia marina HOM05D000880 ORTHO05D007053 3.7e-28 128.3 107 64.5
Rhsim13G0009800 Rhododendron simsii HOM05D000880 ORTHO05D007053 3.7e-28 128.3 107 65.4
vmacro02446 Vaccinium macrocarpon HOM05D000880 ORTHO05D007053 3.7e-28 128.3 112 62.5
CAN.G472.10 Capsicum annuum HOM05D000880 ORTHO05D007053 4.8e-28 127.9 107 64.5
Dinv33058 Davidia involucrata HOM05D000880 ORTHO05D007053 1.8e-27 125.9 107 63.6
COL.COLO4_23337 Corchorus olitorius HOM05D000880 ORTHO05D007053 3.1e-27 125.2 108 63.0
Atru.chr5.1139 Acer truncatum HOM05D000880 ORTHO05D007053 5.3e-27 124.4 108 63.0
Peaxi162Scf00001g42030 Petunia axillaris HOM05D000880 ORTHO05D007053 5.3e-27 124.4 107 62.6
HanXRQChr04g0114151 Helianthus annuus HOM05D000880 ORTHO05D007053 6.9e-27 124.0 107 60.7
Cpa.g.sc9.255 Carica papaya HOM05D000880 ORTHO05D007053 9.1e-27 123.6 108 63.0
TAR365G0367 Trochodendron aralioides HOM05D000880 ORTHO05D007053 9.1e-27 123.6 109 62.4
Nn3g21501 Nelumbo nucifera HOM05D000880 ORTHO05D007053 2.0e-26 122.5 109 59.6
Thecc.01G301400 Theobroma cacao HOM05D000880 ORTHO05D007053 2.0e-26 122.5 108 63.0
QL12p028391 Quercus lobata HOM05D000880 ORTHO05D007053 4.5e-26 121.3 108 60.2
Ciclev10018978m.g Citrus clementina HOM05D000880 ORTHO05D007053 5.9e-26 120.9 108 62.0
Aqoxy2G02934 Aquilegia oxysepala HOM05D000880 ORTHO05D007053 1.0e-25 120.2 107 61.7
TWI59G0706 Tripterygium wilfordii HOM05D000880 ORTHO05D007053 1.0e-25 120.2 108 60.2
MBI14_g32928_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D007053 1.3e-25 119.8 108 61.1
Prupe.8G262200 Prunus persica HOM05D000880 ORTHO05D007053 1.3e-25 119.8 108 63.0
Lalb_Chr02g0146401 Lupinus albus HOM05D000880 ORTHO05D007053 1.7e-25 119.4 107 57.9
Lj5g0001867 Lotus japonicus HOM05D000880 ORTHO05D007053 2.2e-25 119.0 108 59.3
Potri.014G128400 Populus trichocarpa HOM05D000880 ORTHO05D007053 2.2e-25 119.0 107 61.7
Glyma.02G017400 Glycine max HOM05D000880 ORTHO05D007053 3.8e-25 118.2 108 59.3
Glyma.10G017800 Glycine max HOM05D000880 ORTHO05D007053 3.8e-25 118.2 108 59.3
CiPaw.08G094700 Carya illinoinensis HOM05D000880 ORTHO05D007053 5.0e-25 117.9 108 59.3
ECA236G1870 Erigeron canadensis HOM05D000880 ORTHO05D007053 6.5e-25 117.5 107 57.9
Manes.05G061800 Manihot esculenta HOM05D000880 ORTHO05D007053 6.5e-25 117.5 108 60.2
arahy.Tifrunner.gnm1.ann1.VZZJ8Q Arachis hypogaea HOM05D000880 ORTHO05D007053 8.5e-25 117.1 107 57.9
Ca_10329_v3 Cicer arietinum L. HOM05D000880 ORTHO05D007053 8.5e-25 117.1 108 57.4
GSVIVG01028027001 Vitis vinifera HOM05D000880 ORTHO05D007053 8.5e-25 117.1 107 59.8
TPR.G33956 Trifolium pratense HOM05D000880 ORTHO05D007053 1.4e-24 116.3 109 57.8
Haze_04945 Corylus avellana HOM05D000880 ORTHO05D007053 4.2e-24 114.8 108 57.4
Lsat_1_v5_gn_8_164240 Lactuca sativa HOM05D000880 ORTHO05D007053 5.5e-24 114.4 107 60.7
Cfa005905 Carpinus fangiana HOM05D000880 ORTHO05D007053 7.2e-24 114.0 108 57.4
unitig_32.g10658 Utricularia gibba HOM05D000880 ORTHO05D007053 7.2e-24 114.0 107 57.0
Gohir.D11G119200 Gossypium hirsutum HOM05D000880 ORTHO05D007053 9.4e-24 113.6 107 58.9
Gorai.007G127700 Gossypium raimondii HOM05D000880 ORTHO05D007053 9.4e-24 113.6 107 58.9
Medtr1g088410 Medicago truncatula HOM05D000880 ORTHO05D007053 9.4e-24 113.6 109 56.9
VMungo0720G1277 Vigna mungo HOM05D000880 ORTHO05D007053 9.4e-24 113.6 108 57.4
FvH4_2g25810 Fragaria vesca HOM05D000880 ORTHO05D007053 1.2e-23 113.2 108 58.3
FAN20G0148 Fragaria x ananassa HOM05D000880 ORTHO05D007053 1.2e-23 113.2 108 58.3
FAN24G3174 Fragaria x ananassa HOM05D000880 ORTHO05D007053 1.2e-23 113.2 108 58.3
Gohir.A11G114100 Gossypium hirsutum HOM05D000880 ORTHO05D007053 1.2e-23 113.2 107 59.8
Lalb_Chr21g0309241 Lupinus albus HOM05D000880 ORTHO05D007053 1.2e-23 113.2 107 57.0
SGA_v2.0_scaffold1G00361 Striga asiatica HOM05D000880 ORTHO05D007053 1.6e-23 112.8 159 45.9
MD03G1288900 Malus domestica HOM05D000880 ORTHO05D007053 2.1e-23 112.5 107 58.9
FAN15G1023 Fragaria x ananassa HOM05D000880 ORTHO05D007053 2.7e-23 112.1 108 57.4
Zm00001eb282720 Zea mays HOM05D000880 ORTHO05D007053 3.6e-23 111.7 107 57.0
Gohir.A08G076500 Gossypium hirsutum HOM05D000880 ORTHO05D007053 4.7e-23 111.3 107 57.9
arahy.Tifrunner.gnm1.ann1.JXQ8LX Arachis hypogaea HOM05D000880 ORTHO05D007053 6.1e-23 110.9 107 58.9
Sc05g0003770 Simmondsia chinensis HOM05D000880 ORTHO05D007053 6.1e-23 110.9 108 56.5
EL10Ac7g17514 Beta vulgaris HOM05D000880 ORTHO05D007053 7.9e-23 110.5 107 55.1
Os05g0154500 Oryza sativa ssp. japonica HOM05D000880 ORTHO05D007053 7.9e-23 110.5 107 56.1
Psat6g165160 Pisum sativum HOM05D000880 ORTHO05D007053 7.9e-23 110.5 107 57.9
MELO3C026912.2 Cucumis melo HOM05D000880 ORTHO05D007053 1.0e-22 110.2 107 57.9
PGR044G2013 Punica granatum HOM05D000880 ORTHO05D007053 1.0e-22 110.2 108 55.6
Actinidia24361 Actinidia chinensis HOM05D000880 ORTHO05D007053 1.4e-22 109.8 107 57.9
ClCG03G013010 Citrullus lanatus HOM05D000880 ORTHO05D007053 1.4e-22 109.8 107 57.0
Gohir.D08G086000 Gossypium hirsutum HOM05D000880 ORTHO05D007053 1.4e-22 109.8 107 57.0
Gorai.004G090500 Gossypium raimondii HOM05D000880 ORTHO05D007053 1.4e-22 109.8 107 57.0
Phvul.007G147200 Phaseolus vulgaris HOM05D000880 ORTHO05D007053 1.8e-22 109.4 107 56.1
HPP92_007056 Vanilla planifolia HOM05D000880 ORTHO05D007053 1.8e-22 109.4 108 58.3
RcHm_v2.0_Chr6g0294121 Rosa chinensis HOM05D000880 ORTHO05D007053 2.3e-22 109.0 107 55.1
Sed0026689 Sechium edule HOM05D000880 ORTHO05D007053 3.0e-22 108.6 108 57.4
MELO3C015161.2 Cucumis melo HOM05D000880 ORTHO05D007053 6.7e-22 107.5 107 57.0
CsaV3_1G043050 Cucumis sativus L. HOM05D000880 ORTHO05D007053 6.7e-22 107.5 108 56.5
PSO339G1812 Papaver somniferum HOM05D000880 ORTHO05D007053 6.7e-22 107.5 107 57.0
PSO384G2678 Papaver somniferum HOM05D000880 ORTHO05D007053 6.7e-22 107.5 107 57.0
Hund05431 Selenicereus undatus HOM05D000880 ORTHO05D007053 1.1e-21 106.7 107 53.3
THA.LOC104802176 Tarenaya hassleriana HOM05D000880 ORTHO05D007053 1.1e-21 106.7 108 54.6
CDE01G0629 Ceratophyllum demersum HOM05D000880 ORTHO05D007053 1.5e-21 106.3 109 53.2
AUR62008670 Chenopodium quinoa HOM05D000880 ORTHO05D007053 1.5e-21 106.3 107 57.0
AUR62025574 Chenopodium quinoa HOM05D000880 ORTHO05D007053 1.5e-21 106.3 107 57.0
Eucgr.K03489 Eucalyptus grandis HOM05D000880 ORTHO05D007053 2.0e-21 105.9 112 56.2
Ah.15g093160 Amaranthus hybridus HOM05D000880 ORTHO05D007053 3.3e-21 105.1 107 53.3
ATR0057G121 Amborella trichopoda HOM05D000880 ORTHO05D007053 4.4e-21 104.8 107 57.0
Thhalv10010145m.g Eutrema salsugineum HOM05D000880 ORTHO05D007053 4.4e-21 104.8 107 54.2
AUR62018540 Chenopodium quinoa HOM05D000880 ORTHO05D007053 7.4e-21 104.0 107 55.1
A09p46740 Brassica napus HOM05D000880 ORTHO05D007053 9.7e-21 103.6 107 53.3
BolC8t50508H Brassica oleracea HOM05D000880 ORTHO05D007053 9.7e-21 103.6 107 53.3
BraA09t40136Z Brassica rapa HOM05D000880 ORTHO05D007053 9.7e-21 103.6 107 53.3
Carub.0005s2034 Capsella rubella HOM05D000880 ORTHO05D007053 9.7e-21 103.6 107 53.3
SHI15144 Sapria himalayana HOM05D000880 ORTHO05D007053 9.7e-21 103.6 108 55.6
Sp5g08620 Schrenkiella parvula HOM05D000880 ORTHO05D007053 9.7e-21 103.6 107 53.3
BcaB01g00245 Brassica carinata HOM05D000880 ORTHO05D007053 1.3e-20 103.2 107 53.3
C08p29070 Brassica napus HOM05D000880 ORTHO05D007053 1.3e-20 103.2 107 52.3
AL5G34740 Arabidopsis lyrata HOM05D000880 ORTHO05D007053 1.7e-20 102.8 107 52.3
AT3G53760 Arabidopsis thaliana HOM05D000880 ORTHO05D007053 1.7e-20 102.8 107 52.3
CARHR163650 Cardamine hirsuta HOM05D000880 ORTHO05D007053 1.7e-20 102.8 107 52.3
MD11G1309000 Malus domestica HOM05D000880 ORTHO05D007053 6.3e-20 100.9 110 54.5
Aa31LG10G9270 Aethionema arabicum HOM05D000880 ORTHO05D007053 1.8e-19 99.4 109 49.5
BcaC07g39735 Brassica carinata HOM05D000880 ORTHO05D007053 2.4e-19 99.0 105 51.4
SMO364G0941 Selaginella moellendorffii HOM05D000880 ORTHO05D007053 2.4e-19 99.0 106 53.8
AagrBONN_evm.TU.Sc2ySwM_117.410 Anthoceros agrestis HOM05D000880 ORTHO05D007053 4.1e-19 98.2 107 51.4
Mapoly0009s0235 Marchantia polymorpha HOM05D000880 ORTHO05D007053 4.1e-19 98.2 107 48.6
ECA247G4025 Erigeron canadensis HOM05D000880 ORTHO05D007053 5.3e-19 97.8 107 51.4
Lsat_1_v5_gn_9_43261 Lactuca sativa HOM05D000880 ORTHO05D007053 5.3e-19 97.8 107 54.2
Pp3c14_20420 Physcomitrium patens HOM05D000880 ORTHO05D007053 2.1e-15 85.9 107 46.7
arahy.Tifrunner.gnm1.ann1.RW9HBG Arachis hypogaea HOM05D000997 ORTHO05D017463 6.7e-14 80.9 107 46.7
SEGI_07599 Sequoiadendron giganteum HOM05D000880 ORTHO05D007053 9.7e-13 77.0 92 46.7
arahy.Tifrunner.gnm1.ann1.67JHEV Arachis hypogaea HOM05D000880 ORTHO05D017463 1.1e-11 73.6 107 43.0
HanXRQChr10g0285001 Helianthus annuus HOM05D000880 ORTHO05D007053 7.0e-11 70.9 107 43.9
Hma1.2p1_0491F.1_g164650 Hydrangea macrophylla HOM05D000880 ORTHO05D007053 9.1e-11 70.5 43 79.1
Nitab4.5_0001879g0170 Nicotiana tabacum HOM05D000880 ORTHO05D007053 2.0e-10 69.3 52 63.5
CBR_g8603 Chara braunii HOM05D000880 ORTHO05D007053 4.2e-08 61.6 38 73.7
PRCOL_00000976 Prasinoderma coloniale HOM05D000880 ORTHO05D007053 4.7e-07 58.2 109 35.8
PGR044G1585 Punica granatum HOM05D000880 ORTHO05D017463 1.4e-06 56.6 49 55.1
PGR044G0168 Punica granatum HOM05D000880 ORTHO05D007053 1.8e-06 56.2 35 77.1
MCO03G526 Micromonas commoda HOM05D000880 ORTHO05D007053 3.0e-06 55.5 108 32.4


User provided reference genes

Program Settings