Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036976.1 Olea europaea HOM05D003723 ORTHO05D004306 6.0e-191 670.6 328 100.0
Oeu014279.1 Olea europaea HOM05D003723 ORTHO05D004306 1.8e-171 605.9 322 89.8
MSTRG.24381 Avicennia marina HOM05D003723 ORTHO05D004306 1.8e-139 499.6 322 76.1
SGA_v2.0_scaffold28G11839 Striga asiatica HOM05D003723 ORTHO05D004306 3.4e-133 478.8 323 72.8
Cc10_g05060 Coffea canephora HOM05D003723 ORTHO05D004306 2.2e-132 476.1 322 72.7
GSVIVG01009321001 Vitis vinifera HOM05D003723 ORTHO05D004306 1.8e-131 473.0 322 72.7
SalBow2G1921 Salvia bowleyana HOM05D003723 ORTHO05D004306 5.4e-131 471.5 339 68.7
Dinv44943 Davidia involucrata HOM05D003723 ORTHO05D004306 1.2e-130 470.3 322 74.5
Nitab4.5_0003725g0010 Nicotiana tabacum HOM05D003723 ORTHO05D004306 5.9e-130 468.0 323 72.1
Lj4C72T17 Lonicera japonica HOM05D003723 ORTHO05D004306 1.7e-129 466.5 322 72.0
Nitab4.5_0000497g0070 Nicotiana tabacum HOM05D003723 ORTHO05D004306 6.6e-129 464.5 323 72.1
Potri.002G117500 Populus trichocarpa HOM05D003723 ORTHO05D004306 6.6e-129 464.5 319 71.8
Manes.02G183600 Manihot esculenta HOM05D003723 ORTHO05D004306 1.1e-128 463.8 318 73.3
Sabra02G0092000 Salix brachista HOM05D003723 ORTHO05D004306 2.5e-128 462.6 319 71.8
CiPaw.08G050900 Carya illinoinensis HOM05D003723 ORTHO05D004306 3.6e-127 458.8 322 70.5
vmacro16900 Vaccinium macrocarpon HOM05D003723 ORTHO05D004306 4.7e-127 458.4 322 71.1
Cfa013762 Carpinus fangiana HOM05D003723 ORTHO05D004306 6.2e-127 458.0 322 70.5
CSS0010741 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 1.4e-126 456.8 322 72.0
PGSC0003DMG400011543 Solanum tuberosum HOM05D003723 ORTHO05D004306 1.8e-126 456.4 322 72.0
CSS0046104 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 2.3e-126 456.1 322 72.0
Haze_22418 Corylus avellana HOM05D003723 ORTHO05D004306 6.8e-126 454.5 329 69.6
Sopen12g030290 Solanum pennellii HOM05D003723 ORTHO05D004306 8.9e-126 454.1 322 72.0
Potri.014G014900 Populus trichocarpa HOM05D003723 ORTHO05D004306 1.2e-125 453.8 318 71.4
TAR628G0363 Trochodendron aralioides HOM05D003723 ORTHO05D004306 1.2e-125 453.8 322 70.2
CiPaw.07G173600 Carya illinoinensis HOM05D003723 ORTHO05D004306 9.8e-125 450.7 322 69.3
DCAR_009874 Daucus carota HOM05D003723 ORTHO05D004306 1.3e-124 450.3 325 69.8
QL93p0154_0009 Quercus lobata HOM05D003723 ORTHO05D004306 4.9e-124 448.4 322 70.8
Eucgr.F02239 Eucalyptus grandis HOM05D003723 ORTHO05D004306 6.4e-124 448.0 322 69.9
Manes.18G095200 Manihot esculenta HOM05D003723 ORTHO05D004306 6.4e-124 448.0 318 71.7
Prupe.1G421300 Prunus persica HOM05D003723 ORTHO05D004306 6.4e-124 448.0 322 69.9
QL12p038269 Quercus lobata HOM05D003723 ORTHO05D004306 6.4e-124 448.0 322 70.8
Solyc12g088290.2 Solanum lycopersicum HOM05D003723 ORTHO05D004306 6.4e-124 448.0 322 71.7
MD08G1080300 Malus domestica HOM05D003723 ORTHO05D004306 1.4e-123 446.8 322 69.6
Sabra14G0008900 Salix brachista HOM05D003723 ORTHO05D004306 2.4e-123 446.0 318 70.4
Nitab4.5_0009040g0020 Nicotiana tabacum HOM05D003723 ORTHO05D004306 1.2e-122 443.7 322 70.8
MD15G1067400 Malus domestica HOM05D003723 ORTHO05D004306 1.6e-122 443.4 322 69.3
Lj4A757T32 Lonicera japonica HOM05D003723 ORTHO05D004306 2.0e-122 443.0 322 67.7
TWI56G1015 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 4.6e-122 441.8 322 67.7
Cpa.g.sc142.42 Carica papaya HOM05D003723 ORTHO05D004306 3.0e-121 439.1 319 70.2
Lsat_1_v5_gn_1_1120 Lactuca sativa HOM05D003723 ORTHO05D004306 3.0e-121 439.1 337 67.1
PGR031G2627 Punica granatum HOM05D003723 ORTHO05D004306 5.0e-121 438.3 324 69.8
Peaxi162Scf00081g02729 Petunia axillaris HOM05D003723 ORTHO05D004306 6.6e-121 438.0 348 65.8
ECA247G0551 Erigeron canadensis HOM05D003723 ORTHO05D004306 1.5e-120 436.8 324 67.6
Nitab4.5_0002314g0030 Nicotiana tabacum HOM05D003723 ORTHO05D004306 1.9e-120 436.4 322 69.9
PGSC0003DMG401010623 Solanum tuberosum HOM05D003723 ORTHO05D004306 2.5e-120 436.0 322 68.9
ClCG05G020690 Citrullus lanatus HOM05D003723 ORTHO05D004306 3.3e-120 435.6 324 67.3
Ciclev10000301m.g Citrus clementina HOM05D003723 ORTHO05D004306 4.3e-120 435.3 319 68.0
TWI12G0955 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 9.5e-120 434.1 323 67.8
AUR62022465 Chenopodium quinoa HOM05D003723 ORTHO05D004306 2.8e-119 432.6 322 68.3
HanXRQChr10g0292161 Helianthus annuus HOM05D003723 ORTHO05D004306 3.6e-119 432.2 316 68.4
MELO3C016827.2 Cucumis melo HOM05D003723 ORTHO05D004306 8.1e-119 431.0 323 67.2
HanXRQChr10g0292141 Helianthus annuus HOM05D003723 ORTHO05D004306 2.3e-118 429.5 317 68.8
CANSAT25G0987 Cannabis sativa HOM05D003723 ORTHO05D004306 5.2e-118 428.3 318 68.2
Atru.chr13.849 Acer truncatum HOM05D003723 ORTHO05D004306 8.9e-118 427.6 329 66.6
Sed0028163 Sechium edule HOM05D003723 ORTHO05D004306 1.2e-117 427.2 322 67.7
PSO541G5768 Papaver somniferum HOM05D003723 ORTHO05D004306 2.0e-117 426.4 316 66.1
Solyc04g077680.3 Solanum lycopersicum HOM05D003723 ORTHO05D004306 2.0e-117 426.4 322 67.7
CsaV3_4G035140 Cucumis sativus L. HOM05D003723 ORTHO05D004306 7.5e-117 424.5 325 66.8
Sopen04g031320 Solanum pennellii HOM05D003723 ORTHO05D004306 2.9e-116 422.5 322 67.4
AUR62043254 Chenopodium quinoa HOM05D003723 ORTHO05D004306 6.4e-116 421.4 326 67.8
Thhalv10028433m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 1.1e-115 420.6 319 65.8
Carub.0006s2652 Capsella rubella HOM05D003723 ORTHO05D004306 1.9e-115 419.9 318 66.7
AL6G41310 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 5.4e-115 418.3 318 66.7
AT4G07410 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 1.6e-114 416.8 319 67.1
Actinidia19301 Actinidia chinensis HOM05D003723 ORTHO05D004306 2.1e-114 416.4 301 70.8
Hund05292 Selenicereus undatus HOM05D003723 ORTHO05D004306 2.1e-114 416.4 324 65.1
Gohir.D10G114400 Gossypium hirsutum HOM05D003723 ORTHO05D004306 3.5e-114 415.6 322 66.1
THA.LOC104824968 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 6.0e-114 414.8 324 65.1
AT1G27470 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 1.0e-113 414.1 318 66.4
Gohir.A10G151900 Gossypium hirsutum HOM05D003723 ORTHO05D004306 1.0e-113 414.1 322 66.1
Aa31sc622G20 Aethionema arabicum HOM05D003723 ORTHO05D004306 1.7e-113 413.3 318 66.4
Thecc.04G063000 Theobroma cacao HOM05D003723 ORTHO05D004306 1.7e-113 413.3 322 65.5
Sc02g0007980 Simmondsia chinensis HOM05D003723 ORTHO05D004306 3.0e-113 412.5 322 64.9
Carub.0001s2603 Capsella rubella HOM05D003723 ORTHO05D004306 5.1e-113 411.8 318 65.1
CARHR287080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 6.6e-113 411.4 319 66.5
Gorai.011G126100 Gossypium raimondii HOM05D003723 ORTHO05D004306 6.6e-113 411.4 320 65.3
DCAR_012822 Daucus carota HOM05D003723 ORTHO05D004306 1.1e-112 410.6 321 67.0
EL10Ac1g02364 Beta vulgaris HOM05D003723 ORTHO05D004306 1.9e-112 409.8 325 63.7
CDE04G2329 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 1.9e-112 409.8 323 65.9
PSO017G5808 Papaver somniferum HOM05D003723 ORTHO05D004306 5.6e-112 408.3 317 65.6
BcaB01g02881 Brassica carinata HOM05D003723 ORTHO05D004306 7.3e-112 407.9 318 66.0
Sp1g23720 Schrenkiella parvula HOM05D003723 ORTHO05D004306 1.2e-111 407.1 321 65.7
BcaC01g06947 Brassica carinata HOM05D003723 ORTHO05D004306 2.1e-111 406.4 320 65.6
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 2.1e-111 406.4 319 65.8
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 2.1e-111 406.4 319 65.8
AL1G40900 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 3.6e-111 405.6 318 64.8
Duzib151G0173 Durio zibethinus HOM05D003723 ORTHO05D004306 4.7e-111 405.2 322 64.3
Sp6g10450 Schrenkiella parvula HOM05D003723 ORTHO05D004306 6.2e-111 404.8 318 64.2
BcaC05g26751 Brassica carinata HOM05D003723 ORTHO05D004306 8.1e-111 404.4 322 64.9
Thhalv10006817m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 8.1e-111 404.4 318 64.8
BcaC05g26567 Brassica carinata HOM05D003723 ORTHO05D004306 2.3e-110 402.9 322 64.0
CDE07G0463 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 2.3e-110 402.9 322 64.6
BraA08t34575Z Brassica rapa HOM05D003723 ORTHO05D004306 4.0e-110 402.1 319 64.6
C03p33700 Brassica napus HOM05D003723 ORTHO05D004306 5.2e-110 401.7 318 64.2
C03p74200 Brassica napus HOM05D003723 ORTHO05D004306 5.2e-110 401.7 320 63.8
BolC3t15689H Brassica oleracea HOM05D003723 ORTHO05D004306 5.2e-110 401.7 318 64.2
Gorai.005G127000 Gossypium raimondii HOM05D003723 ORTHO05D004306 6.8e-110 401.4 324 64.8
Gohir.A02G089200 Gossypium hirsutum HOM05D003723 ORTHO05D004306 8.9e-110 401.0 322 64.0
arahy.Tifrunner.gnm1.ann1.82WHW6 Arachis hypogaea HOM05D003723 ORTHO05D004306 1.2e-109 400.6 322 63.4
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 1.2e-109 400.6 323 64.4
Glyma.14G089042 Glycine max HOM05D003723 ORTHO05D004306 1.2e-109 400.6 322 63.0
A08p26240 Brassica napus HOM05D003723 ORTHO05D004306 1.5e-109 400.2 319 64.3
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 1.5e-109 400.2 320 63.8
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 2.6e-109 399.4 323 64.1
BcaC01g01603 Brassica carinata HOM05D003723 ORTHO05D004306 3.4e-109 399.1 320 63.4
BraA03t12004Z Brassica rapa HOM05D003723 ORTHO05D004306 4.4e-109 398.7 318 64.2
Lj5g0007294 Lotus japonicus HOM05D003723 ORTHO05D004306 4.4e-109 398.7 320 64.7
THA.LOC104825785 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 5.8e-109 398.3 322 63.7
A03p27910 Brassica napus HOM05D003723 ORTHO05D004306 7.6e-109 397.9 318 64.8
Gohir.D02G112100 Gossypium hirsutum HOM05D003723 ORTHO05D004306 1.3e-108 397.1 322 64.0
Peaxi162Scf00160g00521 Petunia axillaris HOM05D003723 ORTHO05D004306 2.2e-108 396.4 298 68.5
BcaC01g04785 Brassica carinata HOM05D003723 ORTHO05D004306 6.4e-108 394.8 318 63.5
Lalb_Chr22g0355711 Lupinus albus HOM05D003723 ORTHO05D004306 1.1e-107 394.0 322 62.7
CARHR027080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 2.4e-107 392.9 320 64.1
Ah.05g167030 Amaranthus hybridus HOM05D003723 ORTHO05D004306 5.4e-107 391.7 318 62.6
Lalb_Chr14g0368121 Lupinus albus HOM05D003723 ORTHO05D004306 7.1e-107 391.3 326 62.0
DCAR_004814 Daucus carota HOM05D003723 ORTHO05D004306 2.1e-106 389.8 320 64.7
SGA_v2.0_scaffold152G36813 Striga asiatica HOM05D003723 ORTHO05D004306 3.5e-106 389.0 287 67.9
Glyma.17G233900 Glycine max HOM05D003723 ORTHO05D004306 5.1e-105 385.2 322 62.4
RcHm_v2.0_Chr6g0309831 Rosa chinensis HOM05D003723 ORTHO05D004306 8.6e-105 384.4 324 62.7
Aa31LG7G10210 Aethionema arabicum HOM05D003723 ORTHO05D004306 1.9e-104 383.3 318 62.3
Aqoxy3G00456 Aquilegia oxysepala HOM05D003723 ORTHO05D004306 1.2e-103 380.6 321 62.9
FAN15G1506 Fragaria x ananassa HOM05D003723 ORTHO05D004306 2.8e-103 379.4 324 62.0
FAN20G3047 Fragaria x ananassa HOM05D003723 ORTHO05D004306 6.2e-103 378.3 325 61.8
FAN27G2988 Fragaria x ananassa HOM05D003723 ORTHO05D004306 1.1e-102 377.5 324 62.0
FvH4_2g32880 Fragaria vesca HOM05D003723 ORTHO05D004306 1.8e-102 376.7 324 61.1
FAN24G1723 Fragaria x ananassa HOM05D003723 ORTHO05D004306 3.1e-102 375.9 324 61.1
Zm00001eb215430 Zea mays HOM05D003723 ORTHO05D004306 6.8e-102 374.8 326 58.9
Os03g0735100 Oryza sativa ssp. japonica HOM05D003723 ORTHO05D004306 4.4e-101 372.1 324 60.2
HPP92_003353 Vanilla planifolia HOM05D003723 ORTHO05D004306 2.9e-100 369.4 328 57.6
arahy.Tifrunner.gnm1.ann1.YU9IEB Arachis hypogaea HOM05D003723 ORTHO05D004306 8.4e-100 367.9 322 61.2
ATR0739G177 Amborella trichopoda HOM05D003723 ORTHO05D004306 1.1e-99 367.5 324 59.0
VMungo0647G0070 Vigna mungo HOM05D003723 ORTHO05D004306 4.2e-99 365.5 325 60.6
Phvul.001G028900 Phaseolus vulgaris HOM05D003723 ORTHO05D004306 5.4e-99 365.2 324 60.5
Zm00001eb056350 Zea mays HOM05D003723 ORTHO05D004306 5.4e-99 365.2 326 58.3
Hma1.2p1_0210F.1_g089420 Hydrangea macrophylla HOM05D003723 ORTHO05D004306 3.0e-97 359.4 268 68.3
Lsat_1_v5_gn_1_440 Lactuca sativa HOM05D003723 ORTHO05D004306 5.3e-94 348.6 263 67.3
Ca_23258_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 9.0e-94 347.8 313 58.1
DCAR_032227 Daucus carota HOM05D003723 ORTHO05D004306 1.2e-93 347.4 318 58.8
Psat6g017680 Pisum sativum HOM05D003723 ORTHO05D004306 5.4e-91 338.6 319 57.7
TPR.G12983 Trifolium pratense HOM05D003723 ORTHO05D004306 3.4e-85 319.3 321 54.8
unitig_0.g1045 Utricularia gibba HOM05D003723 ORTHO05D004306 4.2e-83 312.4 324 54.3
Mapoly0027s0127 Marchantia polymorpha HOM05D003723 ORTHO05D004306 7.1e-83 311.6 325 49.2
Ca_13209_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 1.3e-81 307.4 320 51.2
SEGI_10786 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 3.0e-81 306.2 323 51.4
Medtr8g014080 Medicago truncatula HOM05D003723 ORTHO05D004306 1.1e-80 304.3 313 55.0
AagrBONN_evm.TU.Sc2ySwM_344.864 Anthoceros agrestis HOM05D003723 ORTHO05D004306 9.6e-80 301.2 325 49.5
TPR.G32238 Trifolium pratense HOM05D003723 ORTHO05D004306 3.7e-79 299.3 336 51.5
COL.COLO4_29256 Corchorus olitorius HOM05D003723 ORTHO05D004306 1.4e-78 297.4 321 52.3
Sed0011873 Sechium edule HOM05D003723 ORTHO05D004306 3.0e-73 279.6 223 63.2
CBR_g57871 Chara braunii HOM05D003723 ORTHO05D004306 1.6e-71 273.9 334 44.9
Pp3c22_14490 Physcomitrium patens HOM05D003723 ORTHO05D004306 1.6e-71 273.9 324 46.0
Medtr1g017880 Medicago truncatula HOM05D003723 ORTHO05D004306 4.1e-70 269.2 324 49.1
Pp3c19_13580 Physcomitrium patens HOM05D003723 ORTHO05D004306 6.5e-68 261.9 324 46.6
SMO367G0860 Selaginella moellendorffii HOM05D003723 ORTHO05D004306 4.2e-67 259.2 340 43.5
Dinv39213 Davidia involucrata HOM05D003723 ORTHO05D004306 1.2e-58 231.1 127 86.6
Actinidia10210 Actinidia chinensis HOM05D003723 ORTHO05D004306 8.2e-55 218.4 121 85.1
Oeu053086.3 Olea europaea HOM05D003723 ORTHO05D004306 3.8e-52 209.5 174 62.1
HanXRQChr14g0443971 Helianthus annuus HOM05D003723 ORTHO05D004306 5.5e-51 205.7 209 54.1
TAR376G0468 Trochodendron aralioides HOM05D003723 ORTHO05D004306 2.4e-46 190.3 116 80.2
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 2.2e-44 183.7 210 49.5
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 4.7e-42 176.0 207 47.8
Migut.N02791 Erythranthe guttata HOM05D003723 ORTHO05D004306 1.1e-38 164.9 103 76.7
MCO10G249 Micromonas commoda HOM05D003723 ORTHO05D004306 1.3e-36 157.9 339 32.7
TAR376G0365 Trochodendron aralioides HOM05D003723 ORTHO05D004306 2.2e-36 157.1 111 69.4
Cre13.g606850 Chlamydomonas reinhardtii HOM05D003723 ORTHO05D004306 1.2e-24 118.2 323 29.4
PRCOL_00004412 Prasinoderma coloniale HOM05D003723 ORTHO05D004306 1.7e-23 114.4 347 28.5
Cfa027112 Carpinus fangiana HOM05D003723 ORTHO05D004306 3.6e-18 96.7 334 25.4
Psat7g031120 Pisum sativum HOM05D003723 ORTHO05D004306 5.2e-17 92.8 83 59.0
Pp3c18_6690 Physcomitrium patens HOM05D003723 ORTHO05D004306 1.5e-16 91.3 116 44.8
CAN.G400.11 Capsicum annuum HOM05D002670 ORTHO05D000002 2.8e-10 70.5 103 40.8
CAN.G744.3 Capsicum annuum HOM05D002670 ORTHO05D003079 6.2e-10 69.3 85 50.6


User provided reference genes

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