Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 1.7e-269 932.2 487 100.0
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 9.3e-196 687.2 493 73.6
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 5.3e-191 671.4 495 71.7
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 2.6e-190 669.1 493 70.6
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 4.5e-190 668.3 478 71.8
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 3.8e-189 665.2 478 71.1
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 6.4e-189 664.5 474 72.6
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 1.1e-188 663.7 474 71.5
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 9.3e-188 660.6 495 70.1
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 4.6e-187 658.3 498 69.9
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 6.0e-187 657.9 463 73.7
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 4.8e-184 648.3 496 68.1
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 8.1e-184 647.5 442 73.3
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 4.0e-183 645.2 489 69.9
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 1.2e-182 643.7 498 67.1
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 2.0e-182 642.9 476 70.0
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 4.5e-182 641.7 493 68.4
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 5.8e-182 641.3 512 67.8
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 1.7e-181 639.8 493 68.8
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 4.9e-181 638.3 512 67.2
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 1.9e-180 636.3 492 68.1
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 2.4e-180 636.0 494 69.0
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 5.5e-180 634.8 512 66.4
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 5.5e-180 634.8 491 67.8
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 7.1e-180 634.4 494 68.6
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 2.1e-179 632.9 467 70.4
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 2.7e-179 632.5 538 62.8
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 2.7e-179 632.5 492 67.1
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 6.0e-179 631.3 443 73.1
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 1.3e-178 630.2 464 69.8
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 1.8e-178 629.8 495 68.1
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 2.3e-178 629.4 489 68.9
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 3.0e-178 629.0 488 67.6
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 5.1e-178 628.2 493 66.7
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 1.9e-177 626.3 503 65.8
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 4.3e-177 625.2 486 66.5
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 2.1e-176 622.9 441 72.6
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 2.1e-176 622.9 508 67.1
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 3.1e-175 619.0 483 68.9
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 6.9e-175 617.8 466 70.4
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 1.3e-173 613.6 505 67.1
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 6.5e-173 611.3 485 66.0
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 3.2e-172 609.0 473 68.7
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 2.1e-171 606.3 439 71.1
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 7.9e-171 604.4 481 66.1
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 1.0e-170 604.0 498 64.9
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 1.0e-170 604.0 492 67.1
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.8e-170 603.2 471 68.2
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 3.0e-170 602.4 471 68.4
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 5.1e-170 601.7 496 64.9
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 5.1e-170 601.7 481 67.6
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 6.7e-170 601.3 487 65.5
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 1.9e-169 599.7 521 62.8
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 2.5e-169 599.4 505 64.2
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 3.3e-169 599.0 471 67.9
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 4.3e-169 598.6 503 63.8
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 7.4e-169 597.8 494 64.2
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 9.6e-169 597.4 409 75.1
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 9.6e-169 597.4 436 69.5
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.8e-168 595.9 471 67.7
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 6.3e-168 594.7 498 63.7
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 8.2e-168 594.3 492 67.5
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 8.2e-168 594.3 467 68.3
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 2.4e-167 592.8 470 65.1
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 3.1e-167 592.4 499 62.7
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 4.1e-167 592.0 462 66.9
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 4.5e-166 588.6 487 66.1
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 1.0e-165 587.4 489 65.0
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 1.7e-165 586.6 480 63.5
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 1.7e-165 586.6 487 66.1
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 2.2e-165 586.3 396 76.3
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 8.5e-165 584.3 495 62.8
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 1.9e-164 583.2 425 70.1
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 2.5e-164 582.8 497 62.6
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 5.5e-164 581.6 442 67.9
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 2.1e-163 579.7 499 62.3
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 4.6e-163 578.6 428 68.9
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 3.0e-162 575.9 506 62.6
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 1.9e-161 573.2 438 67.4
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 1.6e-160 570.1 415 70.4
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 3.1e-159 565.8 544 59.0
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 3.8e-157 558.9 440 68.0
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 3.2e-156 555.8 414 69.3
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 2.7e-155 552.7 377 75.3
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 3.3e-153 545.8 427 66.0
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 3.1e-151 539.3 495 59.6
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 2.6e-150 536.2 406 68.5
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 3.4e-150 535.8 499 59.3
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 1.6e-147 526.9 362 71.0
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 3.0e-146 522.7 416 67.5
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 8.8e-146 521.2 375 72.3
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 2.3e-138 496.5 488 57.8
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 6.3e-136 488.4 381 63.3
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 8.2e-136 488.0 349 67.6
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 2.9e-133 479.6 438 59.8
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 1.1e-132 477.6 443 58.0
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 9.4e-132 474.6 416 58.4
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 8.8e-130 468.0 442 57.0
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 2.8e-123 446.4 306 71.9
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 3.7e-120 436.0 365 62.7
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 6.6e-117 425.2 362 60.8
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 1.1e-111 407.9 436 52.8
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 7.0e-111 405.2 340 60.9
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 9.2e-111 404.8 492 48.6
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 1.9e-108 397.1 395 54.2
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 5.6e-108 395.6 383 54.3
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 1.5e-105 387.5 366 56.8
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 1.0e-101 374.8 402 52.5
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 2.3e-101 373.6 271 70.8
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 6.8e-98 362.1 240 74.2
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 2.4e-95 353.6 381 49.1
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 4.6e-94 349.4 355 55.8
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.4e-82 311.2 332 52.4
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 3.2e-79 300.1 348 48.3
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 7.6e-73 278.9 354 45.8
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 8.7e-69 265.4 259 55.6
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 1.6e-62 244.6 456 37.5
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 5.1e-61 239.6 289 49.5
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 5.5e-55 219.5 438 34.2
Cfa005743 Carpinus fangiana HOM05D005856 ORTHO05D007264 3.7e-35 153.7 130 65.4
MD07G1133300 Malus domestica HOM05D005856 ORTHO05D007264 1.0e-32 145.6 116 68.1
Haze_12396 Corylus avellana HOM05D005856 ORTHO05D007264 2.1e-30 137.9 118 62.7
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 1.4e-29 135.2 189 44.4
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 9.7e-28 129.0 177 44.1
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.0e-21 109.0 204 35.3
Dinv17562 Davidia involucrata HOM05D005856 ORTHO05D015634 5.2e-21 106.7 117 47.0
Migut.O00545 Erythranthe guttata HOM05D005856 ORTHO05D007264 6.7e-21 106.3 151 49.7
Cc02_g32220 Coffea canephora HOM05D005856 ORTHO05D007264 4.4e-20 103.6 155 47.1
VMungo0464G1347 Vigna mungo HOM05D005856 ORTHO05D007264 2.8e-19 100.9 127 52.8
SMO361G0803 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 5.0e-16 90.1 101 47.5
SMO199G0090 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 3.2e-15 87.4 89 50.6
AL2G26330 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.0e-13 82.4 67 58.2
SalBow4G2969 Salvia bowleyana HOM05D005856 ORTHO05D015634 8.8e-13 79.3 62 61.3
Rhsim10G0039300 Rhododendron simsii HOM05D005856 ORTHO05D007264 2.0e-09 68.2 77 53.2
Psat5g095160 Pisum sativum HOM05D001167 ORTHO05D036681 4.2e-07 60.5 73 50.7


User provided reference genes

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