Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036109.3 Olea europaea HOM05D004426 ORTHO05D005417 2.7e-256 888.3 476 100.0
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 1.0e-146 524.2 429 73.4
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 1.7e-93 347.4 466 50.6
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 2.5e-92 343.6 457 49.7
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 6.0e-91 339.0 456 53.1
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.4e-79 301.2 468 48.5
CAN.G861.37 Capsicum annuum HOM05D004426 ORTHO05D005417 9.1e-79 298.5 460 48.3
Dinv31766 Davidia involucrata HOM05D004426 ORTHO05D005417 8.5e-77 292.0 462 46.5
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 2.3e-74 283.9 457 48.1
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 1.7e-72 277.7 476 45.6
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 1.8e-71 274.2 443 49.2
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 5.3e-71 272.7 457 47.3
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 5.9e-70 269.2 460 44.8
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 2.7e-67 260.4 462 46.3
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 3.0e-66 256.9 462 46.5
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 1.4e-63 248.1 461 42.5
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 1.8e-63 247.7 461 43.8
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 4.1e-63 246.5 461 42.7
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 7.0e-63 245.7 461 41.4
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 4.5e-62 243.0 434 44.0
CSS0017834 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.4e-58 231.5 432 46.1
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 1.4e-58 231.5 460 44.3
CSS0033092 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 2.3e-58 230.7 433 46.0
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 3.0e-58 230.3 462 43.1
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 5.7e-57 226.1 467 40.9
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 1.3e-56 224.9 463 46.0
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 1.3e-56 224.9 460 42.8
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 1.3e-56 224.9 452 42.7
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 3.1e-55 220.3 459 41.8
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 4.1e-55 219.9 465 38.7
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 9.1e-55 218.8 465 44.1
Haze_20162 Corylus avellana HOM05D004426 ORTHO05D005417 1.6e-54 218.0 467 43.3
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 2.0e-54 217.6 458 40.4
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.3e-53 214.9 464 40.7
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.3e-53 214.9 464 40.7
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 2.9e-53 213.8 461 42.3
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 3.8e-53 213.4 449 42.8
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.1e-52 211.8 460 39.8
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 1.1e-52 211.8 450 39.8
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.5e-52 211.5 465 41.3
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.5e-52 211.5 465 41.3
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.5e-52 211.5 465 41.3
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 1.9e-52 211.1 415 41.7
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.5e-52 210.7 462 40.0
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 2.5e-52 210.7 460 41.7
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 5.5e-52 209.5 473 41.9
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 7.2e-52 209.1 457 41.1
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 9.4e-52 208.8 461 40.8
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 1.2e-51 208.4 457 39.8
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 8.0e-51 205.7 465 41.1
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 1.8e-50 204.5 463 38.9
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 5.7e-49 199.5 461 40.3
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 8.3e-48 195.7 444 42.8
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 2.4e-47 194.1 461 39.9
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 4.5e-46 189.9 443 40.6
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 1.7e-45 188.0 452 38.3
MD12G1041200 Malus domestica HOM05D004426 ORTHO05D005417 1.1e-44 185.3 458 40.4
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 1.5e-44 184.9 460 38.3
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 2.5e-44 184.1 456 39.0
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 7.2e-44 182.6 466 40.1
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.6e-43 181.4 524 36.1
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 2.1e-43 181.0 456 38.2
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 8.0e-43 179.1 462 39.2
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.4e-42 178.3 454 39.0
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 6.8e-42 176.0 501 36.7
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 1.2e-41 175.3 397 39.5
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 3.4e-41 173.7 453 37.7
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 4.4e-41 173.3 432 38.7
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 4.1e-39 166.8 461 36.9
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 5.4e-39 166.4 459 38.1
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 9.2e-39 165.6 459 37.0
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 4.5e-38 163.3 458 36.9
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 6.6e-37 159.5 459 36.4
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 6.1e-35 152.9 454 36.3
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 1.0e-34 152.1 457 35.2
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 4.0e-34 150.2 454 35.5
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 8.9e-34 149.1 443 36.8
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 1.3e-32 145.2 509 34.6
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 1.7e-32 144.8 463 33.5
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 2.2e-32 144.4 458 35.4
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 8.3e-32 142.5 470 36.2
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 1.1e-31 142.1 454 36.3
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 4.1e-31 140.2 419 36.3
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 1.2e-30 138.7 509 33.4
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 1.6e-30 138.3 461 35.1
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 4.6e-30 136.7 444 33.1
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 1.0e-29 135.6 448 35.7
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 2.5e-28 131.0 473 34.9
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 1.1e-26 125.6 441 35.1
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 3.1e-26 124.0 450 36.4
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 6.8e-26 122.9 424 32.1
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 2.6e-25 120.9 473 33.8
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 1.7e-24 118.2 409 34.5
BcaB04g19248 Brassica carinata HOM05D004426 ORTHO05D005417 8.3e-24 115.9 464 33.0
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 4.1e-23 113.6 422 32.9
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 7.3e-20 102.8 423 32.2
CDE07G2012 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 8.1e-19 99.4 396 32.8
CDE04G1213 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.0e-13 82.4 284 35.9
Actinidia03993 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.7e-13 81.6 103 52.4
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 1.7e-13 81.6 384 31.5
Actinidia03885 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.8e-10 71.6 65 64.6
TPR.G15240 Trifolium pratense HOM05D004426 ORTHO05D005417 1.5e-09 68.6 143 42.0
arahy.Tifrunner.gnm1.ann1.71A9RU Arachis hypogaea HOM05D004426 ORTHO05D005417 2.6e-09 67.8 70 58.6
arahy.Tifrunner.gnm1.ann1.U6LB1L Arachis hypogaea HOM05D046571 ORTHO05D038823 9.2e-07 59.3 49 65.3
ECA233G4409 Erigeron canadensis HOM05D004426 ORTHO05D005417 1.6e-06 58.5 59 61.0
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 2.1e-06 58.2 422 28.4


User provided reference genes

Program Settings