Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 9.5e-130 466.8 236 100.0
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 3.9e-99 365.2 233 79.0
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 4.3e-98 361.7 234 77.4
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 2.1e-97 359.4 233 77.3
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 2.1e-97 359.4 233 77.3
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 2.4e-96 355.9 233 75.1
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.1e-96 355.5 234 77.8
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 4.0e-96 355.1 233 76.0
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 7.6e-95 350.9 234 76.5
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 1.0e-94 350.5 233 74.7
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 1.9e-93 346.3 233 75.1
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.6e-92 343.2 234 74.8
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 1.0e-91 340.5 246 72.4
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 2.3e-91 339.3 235 73.2
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 5.1e-91 338.2 233 73.4
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 6.7e-91 337.8 233 73.4
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 3.3e-90 335.5 235 71.5
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 4.3e-90 335.1 234 70.9
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 5.7e-90 334.7 234 71.8
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 5.7e-90 334.7 234 70.9
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 5.7e-90 334.7 233 73.4
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 1.3e-89 333.6 234 71.8
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 2.1e-89 332.8 235 71.9
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 2.1e-89 332.8 234 71.4
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 3.7e-89 332.0 236 70.8
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 6.2e-89 331.3 234 70.1
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 8.2e-89 330.9 233 70.8
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.1e-88 330.5 234 70.1
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 6.9e-88 327.8 234 69.7
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 9.0e-88 327.4 260 66.5
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 9.0e-88 327.4 236 70.8
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 1.5e-87 326.6 212 77.4
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 2.0e-87 326.2 233 70.0
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 2.6e-87 325.9 234 70.1
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.0e-86 323.9 234 70.5
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 1.3e-86 323.6 233 73.0
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 1.3e-86 323.6 235 69.4
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.9e-86 322.4 240 72.5
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 5.0e-86 321.6 236 69.9
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 5.0e-86 321.6 235 68.5
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 5.0e-86 321.6 236 70.3
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 5.0e-86 321.6 236 69.1
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 6.5e-86 321.2 235 68.1
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 6.5e-86 321.2 234 70.1
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 8.4e-86 320.9 234 70.5
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 1.1e-85 320.5 234 68.4
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.1e-85 320.5 236 69.1
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 1.1e-85 320.5 235 68.9
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 1.4e-85 320.1 234 67.5
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 1.9e-85 319.7 237 69.2
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.5e-85 319.3 235 68.5
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.5e-85 319.3 249 69.1
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 3.2e-85 318.9 235 68.9
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 3.2e-85 318.9 236 68.2
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 3.2e-85 318.9 235 68.1
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 4.2e-85 318.5 217 75.1
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 5.5e-85 318.2 234 68.8
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 9.3e-85 317.4 234 70.5
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 1.6e-84 316.6 234 68.4
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 1.6e-84 316.6 220 75.5
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 1.6e-84 316.6 234 67.9
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 2.7e-84 315.8 236 69.5
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 4.6e-84 315.1 234 67.5
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 4.6e-84 315.1 236 68.2
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 7.9e-84 314.3 258 63.6
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.0e-83 313.9 236 68.6
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 1.3e-83 313.5 256 63.7
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.3e-83 313.5 234 68.8
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 1.8e-83 313.2 235 69.4
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 3.0e-83 312.4 234 67.1
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 6.7e-83 311.2 235 67.7
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 1.1e-82 310.5 236 67.8
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.1e-82 310.5 236 68.2
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 1.5e-82 310.1 235 67.7
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.5e-82 309.3 237 67.5
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.3e-82 308.5 234 66.7
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 5.7e-82 308.1 249 64.7
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 5.7e-82 308.1 236 67.4
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 7.4e-82 307.8 234 66.7
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 7.4e-82 307.8 234 66.7
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 9.7e-82 307.4 234 66.2
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 9.7e-82 307.4 236 67.8
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 9.7e-82 307.4 236 67.8
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 2.2e-81 306.2 237 65.8
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.2e-81 306.2 244 65.6
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 2.8e-81 305.8 234 65.8
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.8e-81 305.1 234 67.9
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.3e-81 304.7 234 66.2
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 6.3e-81 304.7 234 66.2
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 6.3e-81 304.7 269 60.2
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 6.3e-81 304.7 269 60.2
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 8.2e-81 304.3 234 65.8
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.1e-80 303.9 234 66.2
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.4e-80 303.5 234 66.2
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 3.1e-80 302.4 235 66.8
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 4.1e-80 302.0 306 54.6
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 5.3e-80 301.6 236 67.4
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 6.9e-80 301.2 236 67.8
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 5.9e-79 298.1 235 64.7
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 1.0e-78 297.4 236 67.4
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 1.7e-78 296.6 235 65.1
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.9e-77 293.1 237 62.9
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 4.2e-77 292.0 236 66.9
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 4.2e-77 292.0 236 63.1
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 4.2e-77 292.0 236 63.1
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 5.5e-77 291.6 230 65.7
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 7.2e-77 291.2 235 64.7
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 1.6e-76 290.0 233 64.4
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 2.1e-76 289.7 235 64.7
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 3.6e-76 288.9 237 65.8
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 6.7e-75 284.6 236 63.1
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 3.3e-74 282.3 236 64.0
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 3.3e-74 282.3 233 61.4
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 4.3e-74 282.0 234 64.1
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 9.7e-74 280.8 200 70.5
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 6.3e-73 278.1 234 61.5
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 3.1e-72 275.8 278 55.8
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 3.1e-72 275.8 274 56.6
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 4.1e-72 275.4 194 72.7
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 1.2e-71 273.9 192 71.4
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 1.5e-71 273.5 240 63.8
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 2.9e-70 269.2 200 68.5
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 3.2e-69 265.8 295 52.2
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 5.5e-69 265.0 228 61.8
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 1.2e-68 263.8 240 60.4
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 1.6e-68 263.5 195 67.7
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.1e-68 263.1 233 63.1
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.7e-68 262.7 195 68.2
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 4.7e-68 261.9 174 74.7
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 1.4e-67 260.4 239 57.3
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 2.6e-66 256.1 234 59.4
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.3e-65 253.8 326 47.2
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.7e-65 253.4 172 75.6
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 2.8e-65 252.7 197 67.0
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.8e-64 250.0 195 66.2
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 7.0e-64 248.1 210 62.4
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 5.9e-63 245.0 195 66.7
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 4.7e-60 235.3 196 63.8
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.8e-59 233.4 201 61.7
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.3e-57 227.3 236 53.4
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 3.7e-57 225.7 171 66.1
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 7.0e-56 221.5 201 55.2
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.8e-54 215.7 229 53.3
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.5e-53 213.8 232 53.0
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 1.5e-53 213.8 234 50.9
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 8.0e-52 208.0 130 79.2
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.0e-51 207.6 171 61.4
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 1.8e-51 206.8 160 65.0
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.8e-51 206.8 235 49.8
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 5.2e-51 205.3 256 51.6
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 8.8e-51 204.5 239 48.1
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 4.4e-50 202.2 239 47.7
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 4.1e-48 195.7 169 61.5
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 1.2e-47 194.1 151 64.9
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 4.5e-47 192.2 151 61.6
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 2.9e-46 189.5 213 52.1
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.8e-46 189.1 201 53.7
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 3.4e-42 176.0 125 73.6
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 4.4e-42 175.6 200 49.0
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 4.4e-42 175.6 145 63.4
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 4.1e-40 169.1 150 60.0
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.9e-38 162.9 125 64.8
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 4.6e-31 139.0 135 54.8
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 5.9e-31 138.7 196 43.9
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 5.0e-30 135.6 127 56.7
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.1e-29 134.4 127 55.9
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 1.6e-28 130.6 177 44.6
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 8.0e-28 128.3 88 73.9
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 5.2e-27 125.6 97 68.0
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 2.0e-23 113.6 91 64.8
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 1.3e-22 110.9 74 77.0
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 8.6e-22 108.2 239 35.1
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 1.1e-21 107.8 74 79.7
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 8.1e-20 101.7 70 68.6
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 5.8e-18 95.5 67 67.2
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 3.7e-09 66.2 113 41.6
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.7e-07 60.1 137 34.3
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 1.3e-06 57.8 41 61.0


User provided reference genes

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