Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034954.1 Olea europaea HOM05D001251 ORTHO05D004135 1.9e-276 955.3 498 100.0
Dinv34262 Davidia involucrata HOM05D001251 ORTHO05D004135 5.1e-125 452.2 541 51.2
MSTRG.4794 Avicennia marina HOM05D001251 ORTHO05D004135 2.0e-121 440.3 542 51.8
Migut.N01518 Erythranthe guttata HOM05D001251 ORTHO05D004135 2.8e-115 419.9 533 49.9
Oeu064410.3 Olea europaea HOM05D001251 ORTHO05D004135 2.8e-115 419.9 529 51.8
SalBow5G5002 Salvia bowleyana HOM05D001251 ORTHO05D004135 6.3e-115 418.7 548 49.8
Duzib138G1188 Durio zibethinus HOM05D001251 ORTHO05D004135 6.3e-107 392.1 531 48.8
QL08p047700 Quercus lobata HOM05D001251 ORTHO05D004135 4.5e-105 386.0 539 48.4
Haze_15754 Corylus avellana HOM05D001251 ORTHO05D004135 1.3e-104 384.4 538 47.0
Prupe.2G200400 Prunus persica HOM05D001251 ORTHO05D004135 7.2e-103 378.6 537 47.5
Gohir.D12G121100 Gossypium hirsutum HOM05D001251 ORTHO05D004135 2.7e-102 376.7 483 50.7
Gorai.008G132000 Gossypium raimondii HOM05D001251 ORTHO05D004135 6.1e-102 375.6 483 50.7
Gohir.A12G117500 Gossypium hirsutum HOM05D001251 ORTHO05D004135 6.7e-101 372.1 534 46.6
Cfa003724 Carpinus fangiana HOM05D001251 ORTHO05D004135 1.5e-100 370.9 533 46.3
Cc02_g39990 Coffea canephora HOM05D001251 ORTHO05D004135 1.2e-97 361.3 537 46.0
Hma1.2p1_0074F.1_g038840 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 1.7e-96 357.5 542 46.3
Potri.014G106800 Populus trichocarpa HOM05D001251 ORTHO05D004135 3.2e-95 353.2 479 47.4
Cpa.g.sc57.78 Carica papaya HOM05D001251 ORTHO05D004135 7.2e-95 352.1 532 46.2
Nitab4.5_0005359g0030 Nicotiana tabacum HOM05D001251 ORTHO05D004135 7.2e-95 352.1 536 45.0
Ciclev10018964m.g Citrus clementina HOM05D001251 ORTHO05D004135 2.1e-94 350.5 529 45.7
CiPaw.01G085700 Carya illinoinensis HOM05D001251 ORTHO05D004135 8.0e-94 348.6 526 47.3
CiPaw.02G045300 Carya illinoinensis HOM05D001251 ORTHO05D004135 8.0e-94 348.6 561 45.1
Thecc.01G332000 Theobroma cacao HOM05D001251 ORTHO05D004135 1.0e-93 348.2 531 44.6
Gorai.008G131800 Gossypium raimondii HOM05D001251 ORTHO05D004135 1.2e-92 344.7 534 46.1
Potri.002G180800 Populus trichocarpa HOM05D001251 ORTHO05D004135 1.2e-92 344.7 481 48.6
Duzib133G0065 Durio zibethinus HOM05D001251 ORTHO05D004135 1.5e-92 344.4 533 43.9
Atru.chr5.788 Acer truncatum HOM05D001251 ORTHO05D004135 3.4e-92 343.2 512 46.3
Manes.05G015600 Manihot esculenta HOM05D001251 ORTHO05D004135 4.4e-92 342.8 527 45.2
CSS0039199 Camellia sinensis var. sinensis HOM05D001251 ORTHO05D004135 2.4e-90 337.0 517 46.4
Dinv32652 Davidia involucrata HOM05D001251 ORTHO05D004135 2.4e-90 337.0 479 47.0
TAR374G0209 Trochodendron aralioides HOM05D001251 ORTHO05D004135 1.6e-89 334.3 548 44.2
Actinidia01529 Actinidia chinensis HOM05D001251 ORTHO05D004135 2.7e-89 333.6 512 43.6
vmacro12634 Vaccinium macrocarpon HOM05D001251 ORTHO05D004135 4.5e-89 332.8 530 44.0
Manes.01G239000 Manihot esculenta HOM05D001251 ORTHO05D004135 1.0e-88 331.6 530 44.5
Nn1g00457 Nelumbo nucifera HOM05D001251 ORTHO05D004135 1.9e-87 327.4 493 45.4
Gohir.A11G101800 Gossypium hirsutum HOM05D001251 ORTHO05D004135 3.2e-87 326.6 484 45.7
Sopen10g001100 Solanum pennellii HOM05D001251 ORTHO05D004135 7.2e-87 325.5 540 44.1
Sabra14G0079000 Salix brachista HOM05D001251 ORTHO05D004135 1.6e-86 324.3 475 46.5
Peaxi162Scf00092g01519 Petunia axillaris HOM05D001251 ORTHO05D004135 2.7e-86 323.6 567 42.0
Solyc10g005080.3 Solanum lycopersicum HOM05D001251 ORTHO05D004135 4.7e-86 322.8 540 44.1
Glyma.07G048500 Glycine max HOM05D001251 ORTHO05D004135 6.1e-86 322.4 475 47.6
CAN.G1150.2 Capsicum annuum HOM05D001251 ORTHO05D004135 1.0e-85 321.6 539 43.6
Sabra02G0133600 Salix brachista HOM05D001251 ORTHO05D004135 2.3e-85 320.5 541 44.7
Ca_09556_v3 Cicer arietinum L. HOM05D001251 ORTHO05D004135 4.0e-85 319.7 533 43.2
Glyma.16G017400 Glycine max HOM05D001251 ORTHO05D004135 5.2e-85 319.3 478 47.1
Medtr7g118330 Medicago truncatula HOM05D001251 ORTHO05D004135 9.8e-84 315.1 526 43.9
TWI14G1269 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 1.7e-83 314.3 554 43.0
Hma1.2p1_2492F.1_g323260 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 2.8e-83 313.5 538 43.1
FvH4_7g17850 Fragaria vesca HOM05D001251 ORTHO05D004135 1.1e-82 311.6 554 42.6
VMungo0331G1277 Vigna mungo HOM05D001251 ORTHO05D004135 1.4e-82 311.2 523 43.2
RcHm_v2.0_Chr1g0361301 Rosa chinensis HOM05D001251 ORTHO05D004135 2.4e-82 310.5 553 43.6
FAN06G1969 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.1e-82 310.1 550 42.5
COL.COLO4_23060 Corchorus olitorius HOM05D001251 ORTHO05D004135 4.1e-82 309.7 532 42.5
FAN06G3608 Fragaria x ananassa HOM05D001251 ORTHO05D004135 4.1e-82 309.7 561 42.1
TPR.G4678 Trifolium pratense HOM05D001251 ORTHO05D004135 5.4e-82 309.3 536 42.4
Glyma.19G260900 Glycine max HOM05D001251 ORTHO05D004135 1.2e-81 308.1 475 45.7
FAN01G0834 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.7e-81 307.0 552 42.4
FAN03G0514 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.7e-81 307.0 557 42.4
Gohir.D12G121000 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.3e-80 304.7 535 42.8
Gohir.A12G117400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 2.3e-80 303.9 535 43.0
FAN10G0258 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.5e-79 301.2 552 42.6
Gorai.007G113900 Gossypium raimondii HOM05D001251 ORTHO05D004135 1.5e-79 301.2 487 44.1
TWI23G1207 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 1.5e-79 301.2 541 42.1
Lj3g0020484 Lotus japonicus HOM05D001251 ORTHO05D004135 1.9e-79 300.8 476 45.4
Glyma.03G261800 Glycine max HOM05D001251 ORTHO05D004135 4.3e-79 299.7 482 44.6
Lalb_Chr10g0100921 Lupinus albus HOM05D001251 ORTHO05D004135 4.3e-79 299.7 480 45.8
MELO3C022302.2 Cucumis melo HOM05D001251 ORTHO05D004135 1.2e-78 298.1 487 44.6
Lj9C609G5 Lonicera japonica HOM05D001251 ORTHO05D004135 1.2e-78 298.1 547 41.9
MD01G1090900 Malus domestica HOM05D001251 ORTHO05D004135 2.8e-78 297.0 562 41.3
arahy.Tifrunner.gnm1.ann1.0U0SSW Arachis hypogaea HOM05D001251 ORTHO05D004135 8.0e-78 295.4 496 43.5
Gohir.D11G106400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.0e-77 295.0 487 43.5
Phvul.010G120401 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 1.4e-77 294.7 516 43.0
arahy.Tifrunner.gnm1.ann1.J7VJ5I Arachis hypogaea HOM05D001251 ORTHO05D004135 1.8e-77 294.3 496 43.3
FAN01G1785 Fragaria x ananassa HOM05D001251 ORTHO05D004135 5.2e-77 292.7 552 41.8
TAR629G3201 Trochodendron aralioides HOM05D001251 ORTHO05D004135 6.8e-77 292.4 483 41.6
FAN10G4260 Fragaria x ananassa HOM05D001251 ORTHO05D004135 5.7e-76 289.3 557 41.5
Psat3g000720 Pisum sativum HOM05D001251 ORTHO05D004135 7.5e-76 288.9 544 41.0
Sc26g0000440 Simmondsia chinensis HOM05D001251 ORTHO05D004135 3.7e-75 286.6 473 42.1
AUR62004570 Chenopodium quinoa HOM05D001251 ORTHO05D004135 4.1e-74 283.1 484 41.1
Hund16759 Selenicereus undatus HOM05D001251 ORTHO05D004135 9.2e-74 282.0 521 41.7
arahy.Tifrunner.gnm1.ann1.P5534Y Arachis hypogaea HOM05D001251 ORTHO05D004135 1.6e-73 281.2 495 40.6
AUR62022683 Chenopodium quinoa HOM05D001251 ORTHO05D004135 5.9e-73 279.3 482 40.9
arahy.Tifrunner.gnm1.ann1.GF54Z4 Arachis hypogaea HOM05D001251 ORTHO05D004135 1.0e-72 278.5 501 40.9
CsaV3_6G008360 Cucumis sativus L. HOM05D001251 ORTHO05D004135 1.0e-72 278.5 481 42.6
ClCG06G002330 Citrullus lanatus HOM05D001251 ORTHO05D004135 1.3e-72 278.1 490 42.2
VMungo1309G2431 Vigna mungo HOM05D001251 ORTHO05D004135 1.1e-71 275.0 523 40.5
DCAR_006991 Daucus carota HOM05D001251 ORTHO05D004135 1.6e-70 271.2 526 39.4
Phvul.009G259400 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 3.1e-69 266.9 481 42.2
Phvul.009G259650 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 4.0e-69 266.5 509 40.9
Sed0026128 Sechium edule HOM05D001251 ORTHO05D004135 5.2e-69 266.2 482 41.3
Nitab4.5_0007792g0010 Nicotiana tabacum HOM05D001251 ORTHO05D004135 2.6e-68 263.8 540 37.8
Eucgr.D02651 Eucalyptus grandis HOM05D001251 ORTHO05D004135 4.4e-68 263.1 520 40.0
unitig_45.g31541 Utricularia gibba HOM05D001251 ORTHO05D004135 2.9e-67 260.4 523 38.0
Actinidia28507 Actinidia chinensis HOM05D001251 ORTHO05D004135 3.2e-66 256.9 347 48.1
EL10Ac1g00171 Beta vulgaris HOM05D001251 ORTHO05D004135 2.7e-65 253.8 532 37.0
ECA240G1436 Erigeron canadensis HOM05D001251 ORTHO05D004135 2.7e-65 253.8 483 41.2
Lalb_Chr15g0076591 Lupinus albus HOM05D001251 ORTHO05D004135 1.0e-64 251.9 470 42.1
Lalb_Chr18g0044761 Lupinus albus HOM05D001251 ORTHO05D004135 3.0e-64 250.4 476 41.2
Sed0027265 Sechium edule HOM05D001251 ORTHO05D004135 3.6e-62 243.4 492 41.7
MBI04_g18999_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 2.3e-61 240.7 500 39.4
MBI12_g27877_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 1.5e-60 238.0 485 37.9
unitig_8.g3406 Utricularia gibba HOM05D001251 ORTHO05D004135 3.4e-60 236.9 510 38.2
Ah.05g178860 Amaranthus hybridus HOM05D001251 ORTHO05D004135 4.9e-59 233.0 483 37.5
PSO782G0772 Papaver somniferum HOM05D001251 ORTHO05D004135 8.3e-59 232.3 553 35.8
Aa31LG1G10420 Aethionema arabicum HOM05D001251 ORTHO05D004135 5.4e-58 229.6 505 38.0
PGR031G0915 Punica granatum HOM05D001251 ORTHO05D004135 8.6e-56 222.2 534 36.7
PSO063G2933 Papaver somniferum HOM05D001251 ORTHO05D004135 1.9e-55 221.1 555 35.9
unitig_8.g4997 Utricularia gibba HOM05D001251 ORTHO05D004135 9.5e-55 218.8 533 37.0
Aqoxy7G00001_Aqoxy7G00002 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 3.6e-54 216.9 450 36.7
THA.LOC104803067 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 3.4e-52 210.3 537 36.3
AT1G01060 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 1.3e-51 208.4 467 38.3
THA.LOC104825910 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 3.8e-51 206.8 478 37.9
unitig_578.g16510 Utricularia gibba HOM05D001251 ORTHO05D004135 2.4e-50 204.1 470 34.7
unitig_22.g6823 Utricularia gibba HOM05D001251 ORTHO05D004135 5.4e-50 203.0 493 36.9
THA.LOC104827645 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 4.6e-49 199.9 496 37.5
HanXRQChr09g0264411 Helianthus annuus HOM05D001251 ORTHO05D004135 1.3e-48 198.4 467 37.7
HanXRQChr15g0489581 Helianthus annuus HOM05D001251 ORTHO05D004135 2.5e-47 194.1 515 35.1
Carub.0001s0116 Capsella rubella HOM05D001251 ORTHO05D004135 4.3e-47 193.4 461 37.5
Oeu032681.1 Olea europaea HOM05D001251 ORTHO05D004135 4.3e-47 193.4 182 61.0
CDE04G0747 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 2.4e-45 187.6 502 33.7
TAR375G0588 Trochodendron aralioides HOM05D000031 ORTHO05D009544 2.0e-44 184.5 244 47.5
Aa31LG1G28200 Aethionema arabicum HOM05D001251 ORTHO05D004135 2.6e-44 184.1 379 39.3
CARHR001420 Cardamine hirsuta HOM05D001251 ORTHO05D004135 2.6e-44 184.1 433 38.6
Hund27142 Selenicereus undatus HOM05D001251 ORTHO05D004135 3.4e-44 183.7 346 39.9
SGA_v2.0_scaffold232G43523 Striga asiatica HOM05D001251 ORTHO05D004135 1.3e-43 181.8 485 35.7
ATR0661G164 Amborella trichopoda HOM05D001251 ORTHO05D004135 1.7e-43 181.4 542 33.2
HanXRQChr09g0264401 Helianthus annuus HOM05D001251 ORTHO05D004135 2.4e-42 177.6 515 35.7
AL1G11460 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 3.2e-42 177.2 465 35.9
Thhalv10007028m.g Eutrema salsugineum HOM05D001251 ORTHO05D004135 3.5e-41 173.7 473 34.9
Os08g0157600 Oryza sativa ssp. japonica HOM05D001251 ORTHO05D004135 3.3e-39 167.2 456 36.0
BcaB03g13553 Brassica carinata HOM05D001071 ORTHO05D004135 4.3e-39 166.8 465 34.6
THA.LOC104815900 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 9.6e-39 165.6 531 34.5
Carub.0004s2954 Capsella rubella HOM05D001251 ORTHO05D004135 1.6e-38 164.9 409 34.5
Sp1g01250 Schrenkiella parvula HOM05D001251 ORTHO05D004135 1.5e-36 158.3 406 36.0
BraA10t42363Z Brassica rapa HOM05D001251 ORTHO05D004135 3.4e-36 157.1 455 34.7
Zm00001eb172450 Zea mays HOM05D001251 ORTHO05D004135 5.8e-36 156.4 472 34.1
BraA08t35670Z Brassica rapa HOM05D001251 ORTHO05D004135 6.4e-35 152.9 390 35.9
A10p00850 Brassica napus HOM05D001251 ORTHO05D004135 8.4e-35 152.5 456 34.6
C03p00110 Brassica napus HOM05D001251 ORTHO05D004135 2.4e-34 151.0 438 34.9
BolC5t28872H Brassica oleracea HOM05D001251 ORTHO05D004135 3.2e-34 150.6 437 34.1
C05p00880 Brassica napus HOM05D001251 ORTHO05D004135 3.0e-32 144.1 517 30.8
BcaB01g06139 Brassica carinata HOM05D001251 ORTHO05D004135 8.7e-32 142.5 442 34.2
BolC3t12576H Brassica oleracea HOM05D001251 ORTHO05D004135 8.7e-32 142.5 442 34.2
Sp4g28860 Schrenkiella parvula HOM05D001251 ORTHO05D004135 1.5e-31 141.7 406 33.7
Psat0s580g0080 Pisum sativum HOM05D001251 ORTHO05D004135 5.6e-31 139.8 181 49.7
Lsat_1_v5_gn_3_140720 Lactuca sativa HOM05D001251 ORTHO05D004135 3.6e-30 137.1 524 30.5
A08p37730 Brassica napus HOM05D001251 ORTHO05D004135 6.2e-30 136.3 362 34.5
AL4G46300 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 1.8e-29 134.8 380 33.7
AT2G46830 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 1.2e-28 132.1 381 33.6
BolC4t21764H Brassica oleracea HOM05D001071 ORTHO05D004135 4.2e-26 123.6 375 33.1
C04p01110 Brassica napus HOM05D001071 ORTHO05D004135 7.1e-26 122.9 376 33.5
BolC7t40758H Brassica oleracea HOM05D001251 ORTHO05D004135 2.1e-25 121.3 514 30.4
CARHR142180 Cardamine hirsuta HOM05D001251 ORTHO05D004135 6.7e-24 116.3 402 31.1
BraA05t19097Z Brassica rapa HOM05D001071 ORTHO05D004135 3.3e-23 114.0 396 32.3
Zm00001eb415760 Zea mays HOM05D001251 ORTHO05D004135 3.3e-23 114.0 196 42.9
CDE12G0822 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 4.8e-22 110.2 285 33.3
HPP92_002735 Vanilla planifolia HOM05D001251 ORTHO05D004135 6.2e-22 109.8 438 30.6
A05p00970 Brassica napus HOM05D001071 ORTHO05D004135 3.1e-21 107.5 458 30.8
Aqoxy7G03772 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 4.0e-21 107.1 203 36.0
Prupe.2G200300 Prunus persica HOM05D001251 ORTHO05D004135 9.0e-21 105.9 183 43.2
HPP92_020838 Vanilla planifolia HOM05D001251 ORTHO05D004135 5.5e-18 96.7 399 31.1
HPP92_020743 Vanilla planifolia HOM05D001251 ORTHO05D004135 4.6e-17 93.6 434 30.0
C07p03620 Brassica napus HOM05D001251 ORTHO05D004135 1.4e-13 82.0 480 27.7
BcaC07g37015 Brassica carinata HOM05D001251 ORTHO05D004135 9.0e-13 79.3 331 30.5
HanXRQChr15g0489571 Helianthus annuus HOM05D001251 ORTHO05D004135 5.9e-12 76.6 469 26.0
BcaC06g36494 Brassica carinata HOM05D001251 ORTHO05D004135 7.6e-12 76.3 412 26.9
BcaC06g36496 Brassica carinata HOM05D001251 ORTHO05D004135 2.9e-11 74.3 238 34.5
SGA_v2.0_scaffold43G16339 Striga asiatica HOM05D000071 ORTHO05D000029 5.0e-11 73.6 123 44.7
BcaC02g12627 Brassica carinata HOM05D001071 ORTHO05D000932 2.1e-09 68.2 114 39.5
FAN02G3085 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.0e-08 65.9 138 37.7
FAN03G1652 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.0e-08 65.9 138 37.7
FAN17G2333 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.0e-08 64.3 101 42.6
C07p03630 Brassica napus HOM05D001251 ORTHO05D004135 1.1e-07 62.4 151 35.1
C08p00060 Brassica napus HOM05D001251 ORTHO05D004135 1.1e-07 62.4 155 37.4
BcaC06g36495 Brassica carinata HOM05D001251 ORTHO05D004135 3.3e-07 60.8 199 29.6
FAN24G2965 Fragaria x ananassa HOM05D001251 ORTHO05D004135 4.3e-07 60.5 137 35.8
BcaC07g37009 Brassica carinata HOM05D001251 ORTHO05D004135 2.8e-06 57.8 152 33.6
VMungo1383G3693 Vigna mungo HOM05D001251 ORTHO05D004135 3.7e-06 57.4 141 35.5
C08p00050 Brassica napus HOM05D001251 ORTHO05D004135 8.2e-06 56.2 157 33.1
BolC8t46805H Brassica oleracea HOM05D001251 ORTHO05D004135 8.2e-06 56.2 157 33.1


User provided reference genes

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