Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034757.1 Olea europaea HOM05D004116 ORTHO05D004734 1.3e-79 299.7 149 100.0
Oeu045355.1 Olea europaea HOM05D004116 ORTHO05D004734 3.0e-65 251.9 140 88.6
Nitab4.5_0008573g0070 Nicotiana tabacum HOM05D004116 ORTHO05D004734 2.8e-63 245.4 138 87.7
PGSC0003DMG400001440 Solanum tuberosum HOM05D004116 ORTHO05D004734 2.8e-63 245.4 137 89.1
Cc07_g03830 Coffea canephora HOM05D004116 ORTHO05D004734 1.8e-62 242.7 138 84.8
Nitab4.5_0000565g0080 Nicotiana tabacum HOM05D004116 ORTHO05D004734 1.8e-62 242.7 138 87.0
Sopen02g033270 Solanum pennellii HOM05D004116 ORTHO05D004734 1.8e-62 242.7 137 88.3
CAN.G206.195 Capsicum annuum HOM05D004116 ORTHO05D004734 9.2e-62 240.4 137 86.1
Dinv33806 Davidia involucrata HOM05D004116 ORTHO05D004734 8.6e-60 233.8 137 84.7
Migut.H00657 Erythranthe guttata HOM05D004116 ORTHO05D004734 8.6e-60 233.8 138 84.1
vmacro18164 Vaccinium macrocarpon HOM05D004116 ORTHO05D004734 1.5e-59 233.0 137 81.0
Dinv11490 Davidia involucrata HOM05D004116 ORTHO05D004734 1.9e-59 232.6 138 82.6
Sopen06g031210 Solanum pennellii HOM05D004116 ORTHO05D004734 5.6e-59 231.1 137 83.2
PGSC0003DMG400007132 Solanum tuberosum HOM05D004116 ORTHO05D004734 9.5e-59 230.3 137 83.2
Actinidia26244 Actinidia chinensis HOM05D004116 ORTHO05D004734 3.6e-58 228.4 137 81.8
Hma1.2p1_0037F.1_g023840 Hydrangea macrophylla HOM05D004116 ORTHO05D004734 3.6e-58 228.4 138 81.9
Actinidia17574 Actinidia chinensis HOM05D004116 ORTHO05D004734 8.0e-58 227.3 137 81.8
DCAR_011063 Daucus carota HOM05D004116 ORTHO05D004734 1.0e-57 226.9 137 80.3
CSS0030715 Camellia sinensis var. sinensis HOM05D004116 ORTHO05D004734 1.8e-57 226.1 138 79.7
SGA_v2.0_scaffold413G51160 Striga asiatica HOM05D004116 ORTHO05D004734 4.0e-57 224.9 138 81.2
MSTRG.23904 Avicennia marina HOM05D004116 ORTHO05D004734 5.2e-57 224.6 140 80.0
Lju41A7G39 Lonicera japonica HOM05D004116 ORTHO05D004734 8.9e-57 223.8 134 81.3
Solyc06g074770.4 Solanum lycopersicum HOM05D004116 ORTHO05D004734 1.5e-56 223.0 135 82.2
Rhsim08G0073200 Rhododendron simsii HOM05D004116 ORTHO05D004734 1.7e-55 219.5 136 77.9
TAR629G1084 Trochodendron aralioides HOM05D004116 ORTHO05D004734 1.7e-55 219.5 140 77.9
Lj4C115G25 Lonicera japonica HOM05D004116 ORTHO05D004734 1.1e-54 216.9 138 78.3
GSVIVG01011484001 Vitis vinifera HOM05D004116 ORTHO05D004734 1.1e-54 216.9 138 78.3
SGA_v2.0_scaffold4G02415 Striga asiatica HOM05D004116 ORTHO05D004734 9.2e-54 213.8 136 78.7
Peaxi162Scf00166g00825 Petunia axillaris HOM05D004116 ORTHO05D004734 1.2e-53 213.4 139 77.0
EL10Ac2g03047 Beta vulgaris HOM05D004116 ORTHO05D004734 2.7e-53 212.2 137 78.1
AL6G26260 Arabidopsis lyrata HOM05D004116 ORTHO05D004734 7.8e-53 210.7 137 76.6
CARHR197910 Cardamine hirsuta HOM05D004116 ORTHO05D004734 7.8e-53 210.7 140 74.3
AT5G15400 Arabidopsis thaliana HOM05D004116 ORTHO05D004734 1.0e-52 210.3 140 75.0
Sc10g0003320 Simmondsia chinensis HOM05D004116 ORTHO05D004734 1.7e-52 209.5 138 78.3
Haze_14475 Corylus avellana HOM05D004116 ORTHO05D004734 2.3e-52 209.1 146 74.7
Cfa007620 Carpinus fangiana HOM05D004116 ORTHO05D004734 3.9e-52 208.4 146 75.3
Lsat_1_v5_gn_4_170201 Lactuca sativa HOM05D004116 ORTHO05D004734 3.9e-52 208.4 131 80.2
THA.LOC104822346 Tarenaya hassleriana HOM05D004116 ORTHO05D004734 3.9e-52 208.4 140 75.0
Atru.chr8.371 Acer truncatum HOM05D004116 ORTHO05D004734 6.6e-52 207.6 133 78.2
Carub.0006s1357 Capsella rubella HOM05D004116 ORTHO05D004734 6.6e-52 207.6 140 72.9
Prupe.3G259400 Prunus persica HOM05D004116 ORTHO05D004734 1.9e-51 206.1 135 73.3
CiPaw.03G091800 Carya illinoinensis HOM05D004116 ORTHO05D004734 3.3e-51 205.3 138 75.4
Nn4g23336 Nelumbo nucifera HOM05D004116 ORTHO05D004734 5.6e-51 204.5 135 76.3
PGR004G0109 Punica granatum HOM05D004116 ORTHO05D004734 7.3e-51 204.1 133 75.2
MD17G1056200 Malus domestica HOM05D004116 ORTHO05D004734 1.6e-50 203.0 135 72.6
Thhalv10012542m.g Eutrema salsugineum HOM05D004116 ORTHO05D004734 3.6e-50 201.8 141 73.0
ClCG10G015430 Citrullus lanatus HOM05D004116 ORTHO05D004734 1.1e-49 200.3 137 67.2
Gohir.A09G012200 Gossypium hirsutum HOM05D004116 ORTHO05D004734 1.1e-49 200.3 142 72.5
Cpa.g.sc14.139 Carica papaya HOM05D004116 ORTHO05D004734 1.8e-49 199.5 135 75.6
Ah.12g062560 Amaranthus hybridus HOM05D004116 ORTHO05D004734 4.0e-49 198.4 132 75.0
Sp6g28690 Schrenkiella parvula HOM05D004116 ORTHO05D004734 5.2e-49 198.0 141 73.0
Eucgr.I01989 Eucalyptus grandis HOM05D004116 ORTHO05D004734 8.9e-49 197.2 144 70.1
Aa31LG11G14160 Aethionema arabicum HOM05D004116 ORTHO05D004734 2.0e-48 196.1 138 73.2
Gorai.006G012900 Gossypium raimondii HOM05D004116 ORTHO05D004734 2.6e-48 195.7 145 69.7
HanXRQChr15g0488441 Helianthus annuus HOM05D004116 ORTHO05D004734 2.6e-48 195.7 135 74.1
QL02p039361 Quercus lobata HOM05D004116 ORTHO05D004734 2.6e-48 195.7 137 70.1
QL02p039609 Quercus lobata HOM05D004116 ORTHO05D004734 2.6e-48 195.7 137 70.1
QL02p039616 Quercus lobata HOM05D004116 ORTHO05D004734 2.6e-48 195.7 137 70.1
TWI34G1118 Tripterygium wilfordii HOM05D004116 ORTHO05D004734 3.4e-48 195.3 142 67.6
MELO3C009839.2 Cucumis melo HOM05D004116 ORTHO05D004734 5.8e-48 194.5 133 67.7
HanXRQChr09g0264141 Helianthus annuus HOM05D004116 ORTHO05D004734 5.8e-48 194.5 134 74.6
CANSAT64G2358 Cannabis sativa HOM05D004116 ORTHO05D004734 7.5e-48 194.1 133 72.2
BraA02t05272Z Brassica rapa HOM05D004116 ORTHO05D004734 9.8e-48 193.7 139 70.5
Duzib264G1228 Durio zibethinus HOM05D004116 ORTHO05D004734 9.8e-48 193.7 139 71.9
Gohir.D09G011100 Gossypium hirsutum HOM05D004116 ORTHO05D004734 9.8e-48 193.7 145 69.0
CsaV3_3G041070 Cucumis sativus L. HOM05D004116 ORTHO05D004734 1.7e-47 193.0 133 66.9
Manes.01G099400 Manihot esculenta HOM05D004116 ORTHO05D004734 2.9e-47 192.2 139 69.8
MBI19_g32361_MAGBIO Magnolia biondii HOM05D004116 ORTHO05D004734 4.9e-47 191.4 137 70.1
Sed0005067 Sechium edule HOM05D004116 ORTHO05D004734 4.9e-47 191.4 137 66.4
A02p03010 Brassica napus HOM05D004116 ORTHO05D004734 1.4e-46 189.9 143 69.2
MD09G1060800 Malus domestica HOM05D004116 ORTHO05D004734 1.4e-46 189.9 135 68.9
Thecc.04G090300 Theobroma cacao HOM05D004116 ORTHO05D004734 1.9e-46 189.5 138 70.3
TWI60G1537 Tripterygium wilfordii HOM05D004116 ORTHO05D004734 1.9e-46 189.5 134 70.9
BcaC03g13414 Brassica carinata HOM05D004116 ORTHO05D004734 2.4e-46 189.1 143 67.8
C02p07680 Brassica napus HOM05D004116 ORTHO05D004734 2.4e-46 189.1 143 67.8
BolC2t06699H Brassica oleracea HOM05D004116 ORTHO05D004734 2.4e-46 189.1 143 67.8
Ciclev10010958m.g Citrus clementina HOM05D004116 ORTHO05D004734 3.2e-46 188.7 134 69.4
BcaNung03312 Brassica carinata HOM05D004116 ORTHO05D004734 5.4e-46 188.0 137 73.0
Duzib147G0424 Durio zibethinus HOM05D004116 ORTHO05D004734 5.4e-46 188.0 136 71.3
COL.COLO4_07430 Corchorus olitorius HOM05D004116 ORTHO05D004734 9.2e-46 187.2 137 70.1
unitig_744.g24002 Utricularia gibba HOM05D004116 ORTHO05D004734 9.2e-46 187.2 141 68.8
RcHm_v2.0_Chr2g0166651 Rosa chinensis HOM05D004116 ORTHO05D004734 1.2e-45 186.8 134 67.2
Aqoxy3G03559 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 2.0e-45 186.0 140 65.7
PSO013G0369 Papaver somniferum HOM05D004116 ORTHO05D004734 2.0e-45 186.0 133 69.9
PSO063G3309 Papaver somniferum HOM05D004116 ORTHO05D004734 2.0e-45 186.0 133 69.9
arahy.Tifrunner.gnm1.ann1.JWLU7F Arachis hypogaea HOM05D004116 ORTHO05D004734 4.6e-45 184.9 143 67.1
arahy.Tifrunner.gnm1.ann1.M1DWNQ Arachis hypogaea HOM05D004116 ORTHO05D004734 4.6e-45 184.9 143 67.1
Glyma.13G059200 Glycine max HOM05D004116 ORTHO05D004734 2.3e-44 182.6 141 65.2
VMungo0464G1725 Vigna mungo HOM05D004116 ORTHO05D004734 3.0e-44 182.2 143 64.3
Glyma.19G027200 Glycine max HOM05D004116 ORTHO05D004734 5.0e-44 181.4 138 65.9
Aqoxy3G00662 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 6.6e-44 181.0 137 65.7
Aqoxy3G01362 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 6.6e-44 181.0 137 65.7
C09p61720 Brassica napus HOM05D004116 ORTHO05D004734 2.5e-43 179.1 142 66.9
Phvul.004G033100 Phaseolus vulgaris HOM05D004116 ORTHO05D004734 2.5e-43 179.1 143 62.9
BolC9t59011H Brassica oleracea HOM05D004116 ORTHO05D004734 4.3e-43 178.3 142 67.6
Ca_04866_v3 Cicer arietinum L. HOM05D004116 ORTHO05D004734 4.3e-43 178.3 142 61.3
A10p23490 Brassica napus HOM05D004116 ORTHO05D004734 1.2e-42 176.8 145 64.8
BraA10t44416Z Brassica rapa HOM05D004116 ORTHO05D004734 1.2e-42 176.8 145 64.8
TPR.G26216 Trifolium pratense HOM05D004116 ORTHO05D004734 2.1e-42 176.0 148 61.5
Sabra17G0078900 Salix brachista HOM05D004116 ORTHO05D004734 4.7e-42 174.9 131 67.9
Lj2g0025037 Lotus japonicus HOM05D004116 ORTHO05D004734 8.1e-42 174.1 151 58.3
RcHm_v2.0_Chr5g0047221 Rosa chinensis HOM05D004116 ORTHO05D004734 1.8e-41 172.9 135 63.7
Potri.004G121200 Populus trichocarpa HOM05D004116 ORTHO05D004734 3.1e-41 172.2 131 66.4
FAN05G0837 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.2e-40 170.2 137 62.8
Potri.017G089600 Populus trichocarpa HOM05D004116 ORTHO05D004734 1.5e-40 169.9 131 65.6
FAN21G1378 Fragaria x ananassa HOM05D004116 ORTHO05D004734 2.6e-40 169.1 140 61.4
FAN09G3106 Fragaria x ananassa HOM05D004116 ORTHO05D004734 3.4e-40 168.7 138 62.3
Psat1g069040 Pisum sativum HOM05D004116 ORTHO05D004734 3.4e-40 168.7 148 60.1
FvH4_6g47550 Fragaria vesca HOM05D004116 ORTHO05D004734 1.7e-39 166.4 138 61.6
FAN14G3940 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.7e-39 166.4 138 61.6
FAN25G2854 Fragaria x ananassa HOM05D004116 ORTHO05D004734 3.7e-39 165.2 141 58.9
FAN02G1010 Fragaria x ananassa HOM05D004116 ORTHO05D004734 6.4e-39 164.5 138 60.9
Lalb_Chr21g0318471 Lupinus albus HOM05D004116 ORTHO05D004734 6.4e-39 164.5 146 58.2
FAN16G0481 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.9e-38 162.9 140 59.3
Medtr6g013690 Medicago truncatula HOM05D004116 ORTHO05D004734 1.9e-38 162.9 137 62.0
FAN11G2920 Fragaria x ananassa HOM05D004116 ORTHO05D004734 2.4e-38 162.5 135 60.0
SHI16441 Sapria himalayana HOM05D004116 ORTHO05D004734 7.8e-37 157.5 128 59.4
CDE04G3166 Ceratophyllum demersum HOM05D006464 ORTHO05D007923 7.1e-30 134.4 91 75.8
FvH4_3g25930 Fragaria vesca HOM05D004116 ORTHO05D004734 9.6e-27 124.0 105 60.0
PSO144G0086 Papaver somniferum HOM05D004116 ORTHO05D004734 9.6e-27 124.0 136 49.3
PSO170G0544 Papaver somniferum HOM05D004116 ORTHO05D004734 9.6e-27 124.0 136 48.5
PSO325G0009 Papaver somniferum HOM05D004116 ORTHO05D004734 6.2e-26 121.3 136 49.3
Mapoly0052s0078 Marchantia polymorpha HOM05D004116 ORTHO05D004734 1.5e-24 116.7 131 48.1
Lsat_1_v5_gn_8_41221 Lactuca sativa HOM05D004116 ORTHO05D004734 2.0e-24 116.3 125 56.8
Solyc02g088550.4 Solanum lycopersicum HOM05D004116 ORTHO05D004734 4.4e-24 115.2 69 88.4
HPP92_023626 Vanilla planifolia HOM05D004116 ORTHO05D004734 5.8e-24 114.8 74 73.0
Os03g0427900 Oryza sativa ssp. japonica HOM05D004116 ORTHO05D004734 1.7e-23 113.2 133 45.1
AagrBONN_evm.TU.Sc2ySwM_340.219 Anthoceros agrestis HOM05D004116 ORTHO05D004734 3.8e-23 112.1 134 49.3
Pp3c15_20630 Physcomitrium patens HOM05D004116 ORTHO05D004734 8.4e-23 110.9 137 43.8
PSO144G0082 Papaver somniferum HOM05D004116 ORTHO05D004734 1.1e-22 110.5 138 47.1
SalBow6G1256 Salvia bowleyana HOM05D003831 ORTHO05D004440 9.3e-22 107.5 134 47.0
SMO356G0406 Selaginella moellendorffii HOM05D004116 ORTHO05D004734 4.6e-21 105.1 138 42.8
PSO761G0054 Papaver somniferum HOM05D004116 ORTHO05D004734 5.6e-19 98.2 141 44.7
CAN.G111.24 Capsicum annuum HOM05D004116 ORTHO05D004734 2.9e-15 85.9 100 51.0
AUR62018140 Chenopodium quinoa HOM05D004116 ORTHO05D004734 6.4e-15 84.7 50 84.0
AUR62034478 Chenopodium quinoa HOM05D004116 ORTHO05D004734 6.4e-15 84.7 50 84.0
CBR_g12111 Chara braunii HOM05D004116 ORTHO05D004734 5.4e-14 81.6 122 40.2
PRCOL_00002499 Prasinoderma coloniale HOM05D004116 ORTHO05D004734 1.9e-06 56.6 91 33.0
Lsat_1_v5_gn_1_20041 Lactuca sativa HOM05D004116 ORTHO05D004734 7.1e-06 54.7 35 74.3


User provided reference genes

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