Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 6.1e-177 624.0 308 100.0
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 5.0e-155 551.2 298 91.6
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 2.4e-141 505.8 300 81.7
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 7.0e-141 504.2 306 82.7
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 6.0e-140 501.1 299 83.3
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 7.8e-140 500.7 299 81.9
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 3.0e-139 498.8 299 81.6
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 1.6e-137 493.0 346 72.3
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 1.4e-136 490.0 293 80.2
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 2.0e-135 486.1 293 78.5
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 5.8e-135 484.6 291 81.1
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 2.2e-134 482.6 299 78.9
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 2.2e-134 482.6 298 77.9
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 2.2e-134 482.6 299 79.9
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 3.7e-134 481.9 296 80.1
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 3.7e-134 481.9 291 80.4
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 3.7e-134 481.9 299 79.6
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 6.4e-134 481.1 300 79.7
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 6.4e-134 481.1 299 78.6
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 1.9e-133 479.6 299 78.3
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 1.9e-133 479.6 296 79.7
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 1.9e-133 479.6 299 78.9
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 3.2e-133 478.8 300 79.7
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 4.1e-133 478.4 299 79.3
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 7.0e-133 477.6 299 79.3
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 9.2e-133 477.2 296 78.7
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.6e-132 476.5 290 80.0
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 3.5e-132 475.3 296 79.4
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 4.6e-132 474.9 296 78.4
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 6.0e-132 474.6 299 78.6
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 6.0e-132 474.6 299 79.3
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 7.8e-132 474.2 296 78.7
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 1.0e-131 473.8 301 77.1
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 1.3e-131 473.4 296 77.0
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 3.0e-131 472.2 299 78.9
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 3.9e-131 471.9 298 75.2
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 1.1e-130 470.3 296 77.7
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 1.1e-130 470.3 299 75.6
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 1.1e-130 470.3 298 77.9
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 1.1e-130 470.3 297 77.1
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 2.5e-130 469.2 297 76.8
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 3.3e-130 468.8 298 78.2
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 4.3e-130 468.4 291 79.7
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 4.3e-130 468.4 299 77.3
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 9.5e-130 467.2 303 75.6
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 9.5e-130 467.2 299 78.3
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 9.5e-130 467.2 296 76.7
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.6e-129 465.3 301 77.7
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 4.7e-129 464.9 299 77.3
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 4.7e-129 464.9 296 77.0
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 6.2e-129 464.5 295 75.3
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 6.2e-129 464.5 298 77.5
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 8.1e-129 464.2 295 75.9
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 8.1e-129 464.2 296 76.7
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 1.1e-128 463.8 297 76.8
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 1.4e-128 463.4 297 75.4
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 1.8e-128 463.0 295 75.9
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 2.3e-128 462.6 304 74.0
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 2.3e-128 462.6 297 76.4
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 2.3e-128 462.6 297 75.8
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 2.3e-128 462.6 295 75.9
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 5.2e-128 461.5 297 76.1
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 5.2e-128 461.5 296 77.0
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 6.8e-128 461.1 299 76.3
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 2.6e-127 459.1 299 75.3
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 3.4e-127 458.8 299 74.2
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 3.4e-127 458.8 307 74.6
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 3.4e-127 458.8 298 75.8
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 4.4e-127 458.4 297 75.1
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 5.8e-127 458.0 297 74.4
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 5.8e-127 458.0 296 76.7
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 7.5e-127 457.6 298 74.2
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 1.7e-126 456.4 296 76.0
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 1.7e-126 456.4 297 75.1
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 2.9e-126 455.7 297 74.7
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 3.7e-126 455.3 303 76.6
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.9e-126 454.9 298 75.2
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 8.3e-126 454.1 306 74.2
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 8.3e-126 454.1 307 73.9
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 8.3e-126 454.1 306 74.2
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 8.3e-126 454.1 307 73.9
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 8.3e-126 454.1 298 75.8
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 1.1e-125 453.8 299 74.9
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 1.4e-125 453.4 306 72.9
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 1.9e-125 453.0 295 76.3
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 7.1e-125 451.1 303 72.9
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 9.2e-125 450.7 307 73.9
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 1.2e-124 450.3 302 73.5
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 1.6e-124 449.9 298 74.8
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 3.5e-124 448.7 307 72.3
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 4.6e-124 448.4 315 71.4
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 6.0e-124 448.0 296 73.3
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 1.7e-123 446.4 296 73.0
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 3.3e-122 442.2 298 71.1
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 4.3e-122 441.8 338 67.8
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 9.5e-122 440.7 299 70.2
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 4.7e-121 438.3 298 74.2
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 6.8e-120 434.5 298 71.5
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 1.5e-119 433.3 277 76.5
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 7.6e-119 431.0 295 70.5
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 1.3e-118 430.3 296 70.6
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 1.3e-118 430.3 298 70.5
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 6.4e-118 427.9 296 71.6
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 1.1e-117 427.2 307 65.8
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 3.2e-117 425.6 303 70.6
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 7.1e-117 424.5 263 81.0
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 2.7e-116 422.5 325 67.1
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 2.7e-116 422.5 325 67.1
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 2.7e-116 422.5 316 69.6
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 7.8e-116 421.0 320 67.2
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 2.3e-115 419.5 299 67.2
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 1.6e-113 413.3 302 68.9
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 2.1e-113 412.9 275 73.5
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 4.7e-113 411.8 298 69.1
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 8.1e-113 411.0 293 68.6
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 1.0e-107 394.0 322 64.0
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 1.5e-106 390.2 261 77.0
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 1.5e-106 390.2 267 73.4
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 4.3e-106 388.7 296 64.9
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 4.0e-104 382.1 397 54.7
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 3.0e-99 365.9 301 58.5
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 1.5e-98 363.6 309 63.1
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.6e-97 360.1 298 61.4
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 3.4e-95 352.4 317 56.8
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 1.7e-94 350.1 325 59.4
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 3.2e-93 345.9 201 86.1
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 6.9e-88 328.2 263 63.9
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 3.8e-86 322.4 323 52.6
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 2.5e-85 319.7 197 78.7
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 5.5e-85 318.5 329 51.1
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.8e-83 313.5 326 51.2
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 5.1e-83 312.0 305 54.1
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 4.3e-82 308.9 318 51.9
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 9.7e-82 307.8 291 58.1
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 3.7e-81 305.8 256 60.5
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 2.8e-73 279.6 263 58.9
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 7.7e-71 271.6 317 45.7
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.9e-70 269.6 187 71.1
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 1.0e-67 261.2 146 88.4
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 7.0e-64 248.4 184 64.1
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 5.7e-58 228.8 179 64.2
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 9.4e-53 211.5 295 39.7
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 3.6e-52 209.5 297 40.7
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 8.0e-52 208.4 152 65.8
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 8.8e-51 204.9 124 83.9
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 2.0e-47 193.7 148 64.2
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 2.1e-44 183.7 132 68.2
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 2.7e-44 183.3 98 90.8
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.6e-44 183.0 112 82.1
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 4.5e-39 166.0 309 37.2
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 7.2e-37 158.7 303 34.3
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 6.1e-36 155.6 88 81.8
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 6.8e-35 152.1 85 87.1
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 2.4e-32 143.7 126 63.5
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 1.2e-31 141.4 85 80.0
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 2.0e-23 114.0 63 84.1
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 3.9e-22 109.8 116 52.6
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 3.6e-20 103.2 64 78.1
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 8.0e-20 102.1 65 73.8
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 3.4e-18 96.7 126 53.2
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 7.8e-15 85.5 53 77.4
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 2.1e-12 77.4 44 79.5
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.3e-09 68.2 47 76.6
Ciclev10003579m.g Citrus clementina HOM05D003684 ORTHO05D004428 8.3e-09 65.5 56 62.5
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 1.9e-08 64.3 47 66.0
arahy.Tifrunner.gnm1.ann1.0536J9 Arachis hypogaea HOM05D000340 ORTHO05D000677 1.7e-06 57.8 33 72.7


User provided reference genes

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