Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032819.1 Olea europaea HOM05D000620 ORTHO05D000537 2.5e-43 178.3 87 100.0
Oeu031338.1 Olea europaea HOM05D000620 ORTHO05D000537 9.5e-35 149.8 78 92.3
MSTRG.9168 Avicennia marina HOM05D000620 ORTHO05D000537 6.6e-28 127.1 78 79.5
SGA_v2.0_scaffold62G21406 Striga asiatica HOM05D000620 ORTHO05D000537 3.2e-22 108.2 78 70.5
MSTRG.27475 Avicennia marina HOM05D000620 ORTHO05D000537 2.1e-21 105.5 79 69.6
Oeu033864.1 Olea europaea HOM05D000620 ORTHO05D000537 1.5e-19 99.4 80 65.0
Nitab4.5_0004212g0040 Nicotiana tabacum HOM05D000620 ORTHO05D000537 1.8e-17 92.4 79 63.3
Nitab4.5_0000582g0240 Nicotiana tabacum HOM05D000620 ORTHO05D000537 2.4e-17 92.0 79 63.3
PGSC0003DMG400023339 Solanum tuberosum HOM05D000620 ORTHO05D000537 3.1e-17 91.7 79 62.0
Solyc05g056140.4 Solanum lycopersicum HOM05D000620 ORTHO05D000537 6.8e-17 90.5 79 60.8
Sopen05g034550 Solanum pennellii HOM05D000620 ORTHO05D000537 6.8e-17 90.5 79 60.8
CAN.G694.89 Capsicum annuum HOM05D000620 ORTHO05D000537 2.0e-16 89.0 81 61.7
TWI38G1664 Tripterygium wilfordii HOM05D000620 ORTHO05D000537 2.9e-15 85.1 83 60.2
vmacro07062 Vaccinium macrocarpon HOM05D000620 ORTHO05D000537 3.8e-15 84.7 78 61.5
Gohir.A13G021800 Gossypium hirsutum HOM05D000620 ORTHO05D000537 1.4e-14 82.8 83 57.8
Sabra08G0026100 Salix brachista HOM05D000620 ORTHO05D000537 4.2e-14 81.3 80 61.2
Thecc.10G076100 Theobroma cacao HOM05D000620 ORTHO05D000537 4.2e-14 81.3 84 58.3
CSS0002591 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 7.1e-14 80.5 78 61.5
Gohir.D13G022400 Gossypium hirsutum HOM05D000620 ORTHO05D000537 1.2e-13 79.7 83 56.6
Potri.010G223766 Populus trichocarpa HOM05D000620 ORTHO05D000537 2.1e-13 79.0 80 60.0
Duzib114G0728 Durio zibethinus HOM05D000620 ORTHO05D000537 3.5e-13 78.2 84 57.1
Potri.008G038450 Populus trichocarpa HOM05D000620 ORTHO05D000537 6.0e-13 77.4 80 58.8
Gohir.A10G204900 Gossypium hirsutum HOM05D000620 ORTHO05D000537 1.3e-12 76.3 84 54.8
Gohir.D10G213100 Gossypium hirsutum HOM05D000620 ORTHO05D000537 1.7e-12 75.9 84 54.8
Lsat_1_v5_gn_9_68460 Lactuca sativa HOM05D000620 ORTHO05D000537 1.7e-12 75.9 86 55.8
Manes.10G047300 Manihot esculenta HOM05D000620 ORTHO05D000537 1.7e-12 75.9 80 58.8
Nitab4.5_0006507g0040 Nicotiana tabacum HOM05D000620 ORTHO05D000537 1.7e-12 75.9 79 59.5
Sabra10G0173200 Salix brachista HOM05D000620 ORTHO05D000537 3.0e-12 75.1 80 56.2
Hma1.2p1_0395F.1_g143610 Hydrangea macrophylla HOM05D000620 ORTHO05D000537 5.1e-12 74.3 81 56.8
Peaxi162Scf00858g00315 Petunia axillaris HOM05D000620 ORTHO05D000537 5.1e-12 74.3 68 55.9
Dinv31312 Davidia involucrata HOM05D000620 ORTHO05D000537 8.7e-12 73.6 81 58.0
Dinv36426 Davidia involucrata HOM05D000620 ORTHO05D000537 8.7e-12 73.6 79 59.5
MD07G1173100 Malus domestica HOM05D000620 ORTHO05D000537 8.7e-12 73.6 82 54.9
CARHR274390 Cardamine hirsuta HOM05D000620 ORTHO05D000537 1.1e-11 73.2 78 53.8
TWI63G0715 Tripterygium wilfordii HOM05D000620 ORTHO05D000537 1.1e-11 73.2 83 55.4
FAN03G2001 Fragaria x ananassa HOM05D000620 ORTHO05D000537 1.5e-11 72.8 80 57.5
COL.COLO4_28412 Corchorus olitorius HOM05D000620 ORTHO05D000537 1.9e-11 72.4 79 57.0
MELO3C019807.2 Cucumis melo HOM05D000620 ORTHO05D000537 2.5e-11 72.0 86 54.7
Cc02_g11250 Coffea canephora HOM05D000620 ORTHO05D000537 3.3e-11 71.6 86 54.7
FAN10G2169 Fragaria x ananassa HOM05D000620 ORTHO05D000537 3.3e-11 71.6 80 57.5
FAN10G3653 Fragaria x ananassa HOM05D000620 ORTHO05D000537 3.3e-11 71.6 80 57.5
RcHm_v2.0_Chr1g0363051 Rosa chinensis HOM05D000620 ORTHO05D000537 3.3e-11 71.6 80 57.5
Carub.0008s2139 Capsella rubella HOM05D000620 ORTHO05D000537 4.3e-11 71.2 79 53.2
Atru.chr12.798 Acer truncatum HOM05D000620 ORTHO05D000537 5.6e-11 70.9 83 51.8
MD01G1107300 Malus domestica HOM05D000620 ORTHO05D000537 5.6e-11 70.9 83 53.0
Nitab4.5_0005501g0030 Nicotiana tabacum HOM05D000620 ORTHO05D000537 5.6e-11 70.9 75 53.3
GSVIVG01016259001 Vitis vinifera HOM05D000620 ORTHO05D000537 5.6e-11 70.9 78 56.4
FAN06G3165 Fragaria x ananassa HOM05D000620 ORTHO05D000537 9.6e-11 70.1 82 54.9
Sc09g0006210 Simmondsia chinensis HOM05D000620 ORTHO05D000537 9.6e-11 70.1 97 46.4
BcaC04g19734 Brassica carinata HOM05D000620 ORTHO05D000537 1.3e-10 69.7 78 53.8
A10p17960 Brassica napus HOM05D000620 ORTHO05D000537 1.3e-10 69.7 78 53.8
C09p53450 Brassica napus HOM05D000620 ORTHO05D000537 1.3e-10 69.7 78 53.8
BolC9t58222H Brassica oleracea HOM05D000620 ORTHO05D000537 1.3e-10 69.7 78 53.8
CARHR133730 Cardamine hirsuta HOM05D000620 ORTHO05D000537 1.3e-10 69.7 81 51.9
Manes.07G098900 Manihot esculenta HOM05D000620 ORTHO05D000537 1.3e-10 69.7 77 61.0
PGR044G2673 Punica granatum HOM05D000620 ORTHO05D000537 1.3e-10 69.7 86 50.0
Sp4g21340 Schrenkiella parvula HOM05D000620 ORTHO05D000537 1.3e-10 69.7 81 51.9
Aa31LG1G12670 Aethionema arabicum HOM05D000620 ORTHO05D000537 1.6e-10 69.3 80 52.5
AT5G60710 Arabidopsis thaliana HOM05D000620 ORTHO05D000537 1.6e-10 69.3 78 51.3
BcaB08g36373 Brassica carinata HOM05D000620 ORTHO05D000537 1.6e-10 69.3 78 51.3
Cfa001657 Carpinus fangiana HOM05D000620 ORTHO05D000537 1.6e-10 69.3 84 52.4
A05p07230 Brassica napus HOM05D000620 ORTHO05D000537 2.1e-10 68.9 78 53.8
C04p08690 Brassica napus HOM05D000620 ORTHO05D000537 2.1e-10 68.9 78 53.8
BraA05t19687Z Brassica rapa HOM05D000620 ORTHO05D000537 2.1e-10 68.9 78 53.8
CANSAT56G2654 Cannabis sativa HOM05D000620 ORTHO05D000537 2.1e-10 68.9 86 57.0
FvH4_7g19190 Fragaria vesca HOM05D000620 ORTHO05D000537 2.1e-10 68.9 82 54.9
QL08p055460 Quercus lobata HOM05D000620 ORTHO05D000537 2.1e-10 68.9 82 52.4
Duzib128G0899 Durio zibethinus HOM05D000620 ORTHO05D000537 2.8e-10 68.6 80 55.0
BolC4t22461H Brassica oleracea HOM05D000620 ORTHO05D000537 3.6e-10 68.2 78 53.8
AL8G37300 Arabidopsis lyrata HOM05D000620 ORTHO05D000537 4.8e-10 67.8 78 50.0
Cpa.g.sc17.41 Carica papaya HOM05D000620 ORTHO05D000537 4.8e-10 67.8 87 52.9
Cpa.g.sc53.90 Carica papaya HOM05D000620 ORTHO05D000537 4.8e-10 67.8 85 54.1
CSS0017198 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 6.2e-10 67.4 82 52.4
CSS0024465 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 6.2e-10 67.4 82 52.4
Carub.0004s2100 Capsella rubella HOM05D000620 ORTHO05D000537 6.2e-10 67.4 81 49.4
ClCG08G007580 Citrullus lanatus HOM05D000620 ORTHO05D000537 6.2e-10 67.4 86 54.7
Lsat_1_v5_gn_2_112481 Lactuca sativa HOM05D000620 ORTHO05D000537 6.2e-10 67.4 81 54.3
THA.LOC104825233 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 6.2e-10 67.4 78 53.8
Aa31LG5G20690 Aethionema arabicum HOM05D000620 ORTHO05D000537 8.1e-10 67.0 81 49.4
Aqoxy1G01212 Aquilegia oxysepala HOM05D000620 ORTHO05D000537 8.1e-10 67.0 90 54.4
Glyma.10G210051 Glycine max HOM05D000620 ORTHO05D000537 8.1e-10 67.0 83 53.0
Gohir.A05G104900 Gossypium hirsutum HOM05D000620 ORTHO05D000537 8.1e-10 67.0 91 46.2
Gohir.D05G104700 Gossypium hirsutum HOM05D000620 ORTHO05D000537 8.1e-10 67.0 91 46.2
Sp6g22280 Schrenkiella parvula HOM05D000620 ORTHO05D000537 8.1e-10 67.0 78 50.0
TWI15G0665 Tripterygium wilfordii HOM05D000620 ORTHO05D000537 8.1e-10 67.0 79 55.7
BcaB02g09149 Brassica carinata HOM05D000620 ORTHO05D000537 1.1e-09 66.6 78 55.1
BraA10t43870Z Brassica rapa HOM05D000620 ORTHO05D000537 1.1e-09 66.6 78 51.3
THA.LOC104827353 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 1.1e-09 66.6 78 52.6
Manes.04G018200 Manihot esculenta HOM05D000620 ORTHO05D000537 1.4e-09 66.2 78 52.6
CiPaw.01G271500 Carya illinoinensis HOM05D000620 ORTHO05D000537 1.8e-09 65.9 86 53.5
Duzib150G0259 Durio zibethinus HOM05D000620 ORTHO05D000537 1.8e-09 65.9 98 43.9
Nitab4.5_0000071g0110 Nicotiana tabacum HOM05D000620 ORTHO05D000537 1.8e-09 65.9 83 51.8
AT2G38970 Arabidopsis thaliana HOM05D000620 ORTHO05D000537 2.4e-09 65.5 81 48.1
Ca_10560_v3 Cicer arietinum L. HOM05D000620 ORTHO05D000537 2.4e-09 65.5 86 52.3
Medtr1g094830 Medicago truncatula HOM05D000620 ORTHO05D000537 2.4e-09 65.5 86 52.3
Psat6g182720 Pisum sativum HOM05D000620 ORTHO05D000537 2.4e-09 65.5 86 51.2
BcaC03g13943 Brassica carinata HOM05D000620 ORTHO05D000537 3.1e-09 65.1 78 46.2
BNapus_Darmor_BZH_scaffold_38p00120 Brassica napus HOM05D000620 ORTHO05D000537 3.1e-09 65.1 78 46.2
C02p11510 Brassica napus HOM05D000620 ORTHO05D000537 3.1e-09 65.1 78 46.2
BolC2t07225H Brassica oleracea HOM05D000620 ORTHO05D000537 3.1e-09 65.1 78 46.2
BraA02t05708Z Brassica rapa HOM05D000620 ORTHO05D000537 3.1e-09 65.1 78 46.2
Thecc.09G343700 Theobroma cacao HOM05D000620 ORTHO05D000537 3.1e-09 65.1 92 42.4
TPR.G27446 Trifolium pratense HOM05D000620 ORTHO05D000537 3.1e-09 65.1 85 51.8
HanXRQChr14g0456791 Helianthus annuus HOM05D000620 ORTHO05D000537 4.0e-09 64.7 81 51.9
CANSAT54G2123 Cannabis sativa HOM05D000620 ORTHO05D000537 5.3e-09 64.3 86 46.5
Lj2A16T71 Lonicera japonica HOM05D000620 ORTHO05D000537 5.3e-09 64.3 90 46.7
arahy.Tifrunner.gnm1.ann1.T3CM6Y Arachis hypogaea HOM05D000620 ORTHO05D000537 9.0e-09 63.5 77 46.8
TAR633G1802 Trochodendron aralioides HOM05D000620 ORTHO05D000537 9.0e-09 63.5 84 47.6
Glyma.20G180551 Glycine max HOM05D000620 ORTHO05D000537 1.2e-08 63.2 83 51.8
Nitab4.5_0000602g0010 Nicotiana tabacum HOM05D000620 ORTHO05D000537 1.2e-08 63.2 84 44.0
Rhsim03G0119200 Rhododendron simsii HOM05D000620 ORTHO05D000537 1.2e-08 63.2 80 51.2
DCAR_015525 Daucus carota HOM05D000122 ORTHO05D000537 1.5e-08 62.8 83 43.4
FAN01G2679 Fragaria x ananassa HOM05D000620 ORTHO05D000537 1.5e-08 62.8 84 48.8
Sed0004175 Sechium edule HOM05D000620 ORTHO05D000537 1.5e-08 62.8 81 49.4
Duzib168G1791 Durio zibethinus HOM05D000620 ORTHO05D000537 2.0e-08 62.4 94 42.6
PSO063G5618 Papaver somniferum HOM05D000620 ORTHO05D000537 2.6e-08 62.0 98 42.9
Sed0009832 Sechium edule HOM05D000620 ORTHO05D000537 2.6e-08 62.0 81 51.9
BcaB05g22663 Brassica carinata HOM05D000620 ORTHO05D000537 3.4e-08 61.6 78 44.9
ClCG01G013530 Citrullus lanatus HOM05D000620 ORTHO05D000537 3.4e-08 61.6 86 47.7
Lalb_Chr02g0142051 Lupinus albus HOM05D000620 ORTHO05D000537 3.4e-08 61.6 84 48.8
VMungo0720G1139 Vigna mungo HOM05D000620 ORTHO05D000537 3.4e-08 61.6 83 51.8
GSVIVG01025213001 Vitis vinifera HOM05D000620 ORTHO05D000537 3.4e-08 61.6 88 45.5
Actinidia22447 Actinidia chinensis HOM05D000620 ORTHO05D000537 4.4e-08 61.2 78 47.4
arahy.Tifrunner.gnm1.ann1.924ZJS Arachis hypogaea HOM05D000620 ORTHO05D000537 5.8e-08 60.8 77 45.5
PSO339G2239 Papaver somniferum HOM05D000620 ORTHO05D000537 5.8e-08 60.8 98 41.8
COL.COLO4_18306 Corchorus olitorius HOM05D000620 ORTHO05D000537 7.6e-08 60.5 97 40.2
Dinv32721 Davidia involucrata HOM05D000620 ORTHO05D000537 7.6e-08 60.5 84 46.4
Lj5g0019483 Lotus japonicus HOM05D000620 ORTHO05D000537 7.6e-08 60.5 81 49.4
Lalb_Chr06g0162251 Lupinus albus HOM05D000620 ORTHO05D000537 7.6e-08 60.5 85 45.9
AT3G54780 Arabidopsis thaliana HOM05D000620 ORTHO05D000537 9.9e-08 60.1 79 51.9
Lalb_Chr21g0306031 Lupinus albus HOM05D000620 ORTHO05D000537 9.9e-08 60.1 84 47.6
Hund12060 Selenicereus undatus HOM05D000620 ORTHO05D000537 9.9e-08 60.1 77 50.6
Rhsim09G0151100 Rhododendron simsii HOM05D000620 ORTHO05D000537 1.3e-07 59.7 75 54.7
Duzib170G0735 Durio zibethinus HOM05D000620 ORTHO05D000537 1.7e-07 59.3 94 38.3
RcHm_v2.0_Chr5g0058461 Rosa chinensis HOM05D000620 ORTHO05D000537 1.7e-07 59.3 88 46.6
AL5G35860 Arabidopsis lyrata HOM05D000620 ORTHO05D000537 2.2e-07 58.9 78 50.0
MELO3C004903.2 Cucumis melo HOM05D000620 ORTHO05D000537 2.2e-07 58.9 86 46.5
CsaV3_1G013930 Cucumis sativus L. HOM05D000620 ORTHO05D000537 2.2e-07 58.9 86 46.5
Nn2g10837 Nelumbo nucifera HOM05D000620 ORTHO05D000537 2.2e-07 58.9 85 44.7
Phvul.007G095950 Phaseolus vulgaris HOM05D000620 ORTHO05D000537 2.2e-07 58.9 83 50.6
Cfa011297 Carpinus fangiana HOM05D000620 ORTHO05D000537 2.9e-07 58.5 80 45.0
Nitab4.5_0006532g0020 Nicotiana tabacum HOM05D000620 ORTHO05D000537 2.9e-07 58.5 84 42.9
arahy.Tifrunner.gnm1.ann1.81QCRK Arachis hypogaea HOM05D000620 ORTHO05D000537 3.8e-07 58.2 83 45.8
CiPaw.02G173300 Carya illinoinensis HOM05D000620 ORTHO05D000537 3.8e-07 58.2 89 47.2
Lalb_Chr01g0004431 Lupinus albus HOM05D000620 ORTHO05D000537 3.8e-07 58.2 79 45.6
A01p34180 Brassica napus HOM05D001563 ORTHO05D001956 4.9e-07 57.8 78 42.3
BraA01t03520Z Brassica rapa HOM05D001563 ORTHO05D001956 4.9e-07 57.8 78 42.3
CSS0025667 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 4.9e-07 57.8 76 48.7
DCAR_018794 Daucus carota HOM05D000620 ORTHO05D000537 4.9e-07 57.8 86 40.7
Lj1A201T37 Lonicera japonica HOM05D000620 ORTHO05D000537 6.4e-07 57.4 83 42.2
Lalb_Chr03g0027501 Lupinus albus HOM05D000620 ORTHO05D000537 6.4e-07 57.4 82 43.9
THA.LOC104810864 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 6.4e-07 57.4 78 46.2
arahy.Tifrunner.gnm1.ann1.Z63BXE Arachis hypogaea HOM05D000620 ORTHO05D000537 8.4e-07 57.0 83 44.6
Lsat_1_v5_gn_2_98861 Lactuca sativa HOM05D000620 ORTHO05D000537 1.1e-06 56.6 76 47.4
MD11G1139800 Malus domestica HOM05D000620 ORTHO05D000537 1.1e-06 56.6 83 44.6
PGR102G0386 Punica granatum HOM05D000620 ORTHO05D000537 1.1e-06 56.6 80 43.8
HanXRQChr03g0080931 Helianthus annuus HOM05D000620 ORTHO05D000537 1.4e-06 56.2 76 46.1
Lalb_Chr24g0394741 Lupinus albus HOM05D000620 ORTHO05D000537 1.4e-06 56.2 77 39.0
Os02g0806700 Oryza sativa ssp. japonica HOM05D000620 ORTHO05D000537 1.9e-06 55.8 101 41.6
Sabra09G0006400 Salix brachista HOM05D000620 ORTHO05D000537 1.9e-06 55.8 86 44.2
Sed0019621 Sechium edule HOM05D000620 ORTHO05D000537 1.9e-06 55.8 88 43.2
Cc01_g10900 Coffea canephora HOM05D000620 ORTHO05D000537 2.4e-06 55.5 86 41.9
HanXRQChr07g0194951 Helianthus annuus HOM05D000620 ORTHO05D000537 2.4e-06 55.5 79 50.6
HanXRQChr09g0247301 Helianthus annuus HOM05D000620 ORTHO05D000537 2.4e-06 55.5 77 49.4
Potri.009G010350 Populus trichocarpa HOM05D000620 ORTHO05D000537 2.4e-06 55.5 71 40.8
QL01p021482 Quercus lobata HOM05D000620 ORTHO05D000537 2.4e-06 55.5 80 47.5
Actinidia32444 Actinidia chinensis HOM05D000620 ORTHO05D000537 3.2e-06 55.1 76 52.6
Sopen11g028310 Solanum pennellii HOM05D000620 ORTHO05D000537 3.2e-06 55.1 86 39.5
CAN.G631.44 Capsicum annuum HOM05D000620 ORTHO05D000537 4.2e-06 54.7 89 40.4
DCAR_015298 Daucus carota HOM05D000620 ORTHO05D000537 4.2e-06 54.7 79 49.4
Peaxi162Scf00370g00110 Petunia axillaris HOM05D000620 ORTHO05D000537 7.1e-06 53.9 78 44.9
Actinidia38858 Actinidia chinensis HOM05D000620 ORTHO05D000537 9.3e-06 53.5 76 51.3
Lj3g0026111 Lotus japonicus HOM05D000620 ORTHO05D000537 9.3e-06 53.5 81 44.4
Lalb_Chr14g0374561 Lupinus albus HOM05D000620 ORTHO05D000537 9.3e-06 53.5 82 42.7
TWI75G0723 Tripterygium wilfordii HOM05D000620 ORTHO05D000537 9.3e-06 53.5 73 49.3
TWI79G0883 Tripterygium wilfordii HOM05D000620 ORTHO05D000537 9.3e-06 53.5 75 45.3


User provided reference genes

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