Gene: AT2G38970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G38970
  • Transcript Identifier AT2G38970.1
  • Gene Type Coding gene
  • Location Chr2 : 16274135-16276651 : positive

Gene Family Information

  • ID HOM05D000620
  • #Genes/#Species 922/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G38970.1
  • uniprot F4IU12

Descriptions

  • Description Zinc finger (C3HC4-type RING finger) family protein
  • Computational description Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink).
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Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR036465 von Willebrand factor A-like domain superfamily
IPR002035 von Willebrand factor, type A
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR032838 VWA-Hint protein, Vwaint domain
Mapman id Description
35.1 not assigned.annotated