Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032634.1 Olea europaea HOM05D001647 ORTHO05D001191 5.5e-72 274.2 142 100.0
MSTRG.3140 Avicennia marina HOM05D001647 ORTHO05D001191 1.4e-35 153.3 122 70.5
SalBow1G0849 Salvia bowleyana HOM05D001647 ORTHO05D001191 1.2e-31 140.2 110 68.2
Cc07_g01540 Coffea canephora HOM05D001647 ORTHO05D001191 2.1e-31 139.4 120 65.8
Dinv33429 Davidia involucrata HOM05D001647 ORTHO05D001191 2.3e-30 136.0 123 63.4
CSS0005156 Camellia sinensis var. sinensis HOM05D001647 ORTHO05D001191 4.0e-30 135.2 105 72.4
CSS0049659 Camellia sinensis var. sinensis HOM05D001647 ORTHO05D001191 4.0e-30 135.2 105 72.4
unitig_52.g17659 Utricularia gibba HOM05D001647 ORTHO05D001191 8.8e-30 134.0 124 61.3
Sabra16G0223000 Salix brachista HOM05D001647 ORTHO05D001191 3.3e-29 132.1 135 57.8
Migut.H00066 Erythranthe guttata HOM05D001647 ORTHO05D001191 4.4e-29 131.7 129 59.7
Potri.001G343700 Populus trichocarpa HOM05D001647 ORTHO05D001191 4.4e-29 131.7 111 66.7
arahy.Tifrunner.gnm1.ann1.BA4K4E Arachis hypogaea HOM05D001647 ORTHO05D001191 1.3e-28 130.2 122 62.3
Nitab4.5_0000065g0270 Nicotiana tabacum HOM05D001647 ORTHO05D001191 2.2e-28 129.4 123 59.3
Nitab4.5_0003267g0020 Nicotiana tabacum HOM05D001647 ORTHO05D001191 2.8e-28 129.0 123 59.3
CiPaw.04G029400 Carya illinoinensis HOM05D000709 ORTHO05D001191 4.8e-28 128.3 116 65.5
Solyc07g047900.3 Solanum lycopersicum HOM05D001647 ORTHO05D001191 4.8e-28 128.3 107 65.4
Sopen07g024330 Solanum pennellii HOM05D001647 ORTHO05D001191 4.8e-28 128.3 107 65.4
Atru.chr6.2421 Acer truncatum HOM05D001647 ORTHO05D001191 6.3e-28 127.9 121 60.3
arahy.Tifrunner.gnm1.ann1.S0UJPA Arachis hypogaea HOM05D001647 ORTHO05D001191 6.3e-28 127.9 122 61.5
Haze_14755 Corylus avellana HOM05D000709 ORTHO05D001191 6.3e-28 127.9 104 64.4
Glyma.05G002800 Glycine max HOM05D001647 ORTHO05D001191 6.3e-28 127.9 124 60.5
Manes.15G151600 Manihot esculenta HOM05D001647 ORTHO05D001191 8.2e-28 127.5 123 61.8
Ciclev10014676m.g Citrus clementina HOM05D001647 ORTHO05D001191 1.1e-27 127.1 129 58.1
Nitab4.5_0000489g0100 Nicotiana tabacum HOM05D001647 ORTHO05D001191 1.1e-27 127.1 123 57.7
CAN.G404.63 Capsicum annuum HOM05D001647 ORTHO05D001191 1.4e-27 126.7 123 59.3
VMungo0464G0398 Vigna mungo HOM05D001647 ORTHO05D001191 1.8e-27 126.3 129 58.1
Phvul.004G005000 Phaseolus vulgaris HOM05D001647 ORTHO05D001191 2.4e-27 125.9 107 65.4
Glyma.19G003000 Glycine max HOM05D001647 ORTHO05D001191 4.1e-27 125.2 124 59.7
Nitab4.5_0002077g0020 Nicotiana tabacum HOM05D001647 ORTHO05D001191 5.3e-27 124.8 106 63.2
Ca_04144_v3 Cicer arietinum L. HOM05D001647 ORTHO05D001191 7.0e-27 124.4 133 57.1
Eucgr.I01734 Eucalyptus grandis HOM05D001647 ORTHO05D001191 7.0e-27 124.4 114 62.3
Hma1.2p1_1747F.1_g300520 Hydrangea macrophylla HOM05D001647 ORTHO05D001191 7.0e-27 124.4 110 65.5
QL02p074109 Quercus lobata HOM05D001647 ORTHO05D001191 7.0e-27 124.4 98 69.4
CANSAT64G2892 Cannabis sativa HOM05D001647 ORTHO05D001191 1.2e-26 123.6 113 58.4
MBI16_g05784_MAGBIO Magnolia biondii HOM05D001647 ORTHO05D001191 1.2e-26 123.6 121 57.0
SGA_v2.0_scaffold2G01173 Striga asiatica HOM05D001647 ORTHO05D001191 2.0e-26 122.9 138 55.1
Peaxi162Scf00700g00436 Petunia axillaris HOM05D001647 ORTHO05D001191 5.9e-26 121.3 103 63.1
PGSC0003DMG400006153 Solanum tuberosum HOM05D001647 ORTHO05D001191 1.0e-25 120.6 121 58.7
SGA_v2.0_scaffold42G16007 Striga asiatica HOM05D001647 ORTHO05D001191 1.3e-25 120.2 138 53.6
TAR371G1112 Trochodendron aralioides HOM05D000709 ORTHO05D001191 1.3e-25 120.2 124 54.8
TWI56G0370 Tripterygium wilfordii HOM05D001647 ORTHO05D001191 2.2e-25 119.4 115 57.4
Lj2g0023354 Lotus japonicus HOM05D001647 ORTHO05D001191 2.9e-25 119.0 128 54.7
Psat1g053800 Pisum sativum HOM05D001647 ORTHO05D001191 2.9e-25 119.0 122 57.4
Prupe.3G293300 Prunus persica HOM05D001647 ORTHO05D001191 3.8e-25 118.6 122 53.3
TPR.G31951 Trifolium pratense HOM05D001647 ORTHO05D001191 5.0e-25 118.2 122 58.2
Actinidia05984 Actinidia chinensis HOM05D001647 ORTHO05D001191 6.5e-25 117.9 93 68.8
DCAR_021729 Daucus carota HOM05D000709 ORTHO05D001191 6.5e-25 117.9 110 62.7
Medtr6g004480 Medicago truncatula HOM05D001647 ORTHO05D001191 1.1e-24 117.1 121 57.9
SHI16456 Sapria himalayana HOM05D001647 ORTHO05D001191 1.1e-24 117.1 102 66.7
MD17G1023000 Malus domestica HOM05D001647 ORTHO05D001191 1.5e-24 116.7 122 52.5
FvH4_6g51690 Fragaria vesca HOM05D001647 ORTHO05D001191 1.9e-24 116.3 131 52.7
Nn3g16694 Nelumbo nucifera HOM05D001647 ORTHO05D001191 1.9e-24 116.3 123 56.9
FAN02G3474 Fragaria x ananassa HOM05D001647 ORTHO05D001191 4.2e-24 115.2 123 54.5
FAN14G0654 Fragaria x ananassa HOM05D001647 ORTHO05D001191 4.2e-24 115.2 123 54.5
Sp2g16720 Schrenkiella parvula HOM05D001647 ORTHO05D001191 5.5e-24 114.8 108 62.0
vmacro05874 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 5.5e-24 114.8 108 61.1
AT3G27550 Arabidopsis thaliana HOM05D001647 ORTHO05D001191 7.2e-24 114.4 125 55.2
MD09G1023500 Malus domestica HOM05D001647 ORTHO05D001191 9.4e-24 114.0 107 56.1
THA.LOC104823954 Tarenaya hassleriana HOM05D001647 ORTHO05D001191 1.6e-23 113.2 125 54.4
C07p36660 Brassica napus HOM05D001647 ORTHO05D001191 2.1e-23 112.8 127 55.1
Carub.0005s0598 Capsella rubella HOM05D001647 ORTHO05D001191 2.1e-23 112.8 133 53.4
FAN05G1297 Fragaria x ananassa HOM05D001647 ORTHO05D001191 2.1e-23 112.8 123 53.7
FAN09G0821 Fragaria x ananassa HOM05D001647 ORTHO05D001191 2.1e-23 112.8 123 53.7
FAN14G0999 Fragaria x ananassa HOM05D001647 ORTHO05D001191 2.1e-23 112.8 123 53.7
Sed0000147 Sechium edule HOM05D001647 ORTHO05D001191 2.1e-23 112.8 115 59.1
AL5G16970 Arabidopsis lyrata HOM05D001647 ORTHO05D001191 2.7e-23 112.5 112 56.2
BcaC06g33804 Brassica carinata HOM05D001647 ORTHO05D001191 2.7e-23 112.5 127 55.1
BolC7t44184H Brassica oleracea HOM05D000088 ORTHO05D001191 2.7e-23 112.5 127 55.1
PGR142G3896 Punica granatum HOM05D001647 ORTHO05D001191 2.7e-23 112.5 114 61.4
Duzib147G0348 Durio zibethinus HOM05D001647 ORTHO05D001191 3.6e-23 112.1 98 60.2
RcHm_v2.0_Chr2g0173221 Rosa chinensis HOM05D001647 ORTHO05D001191 3.6e-23 112.1 115 56.5
A06p41080 Brassica napus HOM05D001647 ORTHO05D001191 6.1e-23 111.3 125 53.6
Lj7A600G51 Lonicera japonica HOM05D001647 ORTHO05D001191 6.1e-23 111.3 112 59.8
Thecc.04G019000 Theobroma cacao HOM05D001647 ORTHO05D001191 8.0e-23 110.9 122 53.3
Thhalv10004117m.g Eutrema salsugineum HOM05D001647 ORTHO05D001191 1.0e-22 110.5 125 53.6
GSVIVG01032387001 Vitis vinifera HOM05D001647 ORTHO05D001191 1.0e-22 110.5 119 57.1
Lalb_Chr11g0068561 Lupinus albus HOM05D001647 ORTHO05D001191 1.4e-22 110.2 128 53.9
BraA06t27031Z Brassica rapa HOM05D001647 ORTHO05D001191 1.8e-22 109.8 124 54.0
COL.COLO4_29168 Corchorus olitorius HOM05D000709 ORTHO05D001191 6.8e-22 107.8 122 51.6
Aa31LG2G5110 Aethionema arabicum HOM05D001647 ORTHO05D001191 8.8e-22 107.5 120 54.2
Ah.01g006080 Amaranthus hybridus HOM05D001647 ORTHO05D001191 8.8e-22 107.5 114 56.1
BraA02t08556Z Brassica rapa HOM05D001647 ORTHO05D001191 1.2e-21 107.1 103 62.1
Lsat_1_v5_gn_0_47341 Lactuca sativa HOM05D001647 ORTHO05D001191 1.2e-21 107.1 101 60.4
BcaB07g30153 Brassica carinata HOM05D001647 ORTHO05D001191 1.5e-21 106.7 127 55.9
BcaC06g30978 Brassica carinata HOM05D001647 ORTHO05D001191 2.0e-21 106.3 124 54.8
A02p35540 Brassica napus HOM05D001647 ORTHO05D001191 2.0e-21 106.3 102 60.8
CARHR148930 Cardamine hirsuta HOM05D001647 ORTHO05D001191 2.0e-21 106.3 124 53.2
BcaC03g17472 Brassica carinata HOM05D001647 ORTHO05D001191 2.6e-21 105.9 102 60.8
Gorai.012G064900 Gossypium raimondii HOM05D001647 ORTHO05D001191 7.5e-21 104.4 129 48.8
HanXRQChr17g0548611 Helianthus annuus HOM05D001647 ORTHO05D001191 7.5e-21 104.4 97 61.9
C02p54320 Brassica napus HOM05D001812 ORTHO05D001191 9.8e-21 104.0 102 59.8
BolC2t11499H Brassica oleracea HOM05D001647 ORTHO05D001191 1.3e-20 103.6 102 59.8
CsaV3_5G027060 Cucumis sativus L. HOM05D001647 ORTHO05D001191 3.7e-20 102.1 109 55.0
Gohir.D04G058200 Gossypium hirsutum HOM05D001647 ORTHO05D001191 3.7e-20 102.1 129 48.1
ClCG09G019350 Citrullus lanatus HOM05D001647 ORTHO05D001191 8.3e-20 100.9 124 53.2
MELO3C021588.2 Cucumis melo HOM05D001647 ORTHO05D001191 8.3e-20 100.9 121 54.5
ECA246G2376 Erigeron canadensis HOM05D001647 ORTHO05D001191 1.4e-19 100.1 96 60.4
Gohir.A05G355000 Gossypium hirsutum HOM05D001647 ORTHO05D001191 1.8e-19 99.8 114 51.8
EL10Ac9g21672 Beta vulgaris HOM05D001647 ORTHO05D001191 7.7e-18 94.4 122 50.0
Actinidia36122 Actinidia chinensis HOM05D001647 ORTHO05D001191 1.7e-17 93.2 73 72.6
HPP92_000950 Vanilla planifolia HOM05D001647 ORTHO05D001191 2.3e-17 92.8 116 50.0
Zm00001eb417950 Zea mays HOM05D001647 ORTHO05D001191 2.9e-17 92.4 117 50.4
Sc18g0005250 Simmondsia chinensis HOM05D001647 ORTHO05D001191 3.8e-17 92.0 108 52.8
Aqoxy5G03747 Aquilegia oxysepala HOM05D001647 ORTHO05D001191 5.0e-17 91.7 119 44.5
Zm00001eb354360 Zea mays HOM05D001647 ORTHO05D001191 6.5e-17 91.3 114 47.4
PSO067G0082 Papaver somniferum HOM05D001647 ORTHO05D001191 8.6e-17 90.9 107 47.7
PSO063G0624 Papaver somniferum HOM05D001647 ORTHO05D001191 1.1e-16 90.5 107 47.7
Os05g0145300 Oryza sativa ssp. japonica HOM05D001647 ORTHO05D001191 8.0e-15 84.3 111 49.5
BcaC04g23899 Brassica carinata HOM05D001647 ORTHO05D001191 3.0e-14 82.4 99 53.5
C09p03660 Brassica napus HOM05D001647 ORTHO05D040229 3.0e-14 82.4 95 52.6
ATR0824G238 Amborella trichopoda HOM05D001647 ORTHO05D001191 3.7e-12 75.5 128 39.1
CDE10G1164 Ceratophyllum demersum HOM05D001647 ORTHO05D001191 3.7e-12 75.5 88 52.3
CDE10G0781 Ceratophyllum demersum HOM05D001647 ORTHO05D001191 6.3e-12 74.7 88 51.1
AUR62016795 Chenopodium quinoa HOM05D001647 ORTHO05D001191 3.5e-10 68.9 126 39.7
Oeu054628.1 Olea europaea HOM05D001647 ORTHO05D001191 1.3e-09 67.0 53 69.8
AUR62010426 Chenopodium quinoa HOM05D001647 ORTHO05D001191 2.3e-09 66.2 140 37.1


User provided reference genes

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