Gene: Solyc07g047900.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g047900.3
  • Transcript Identifier Solyc07g047900.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 58993777-58996913 : negative

Gene Family Information

  • ID HOM05D001647
  • #Genes/#Species 393/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g047900.3.1
  • uniprot A0A3Q7HD76
  • gene_id Solyc07g047900

Descriptions

  • Description RNA-binding CRS1 / YhbY (CRM) domain protein (AHRD V3.3 *-* Q9LT57_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0140040
ISO
PLAZA Integrative Orthologymitochondrial polycistronic RNA processing AT3G27550
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing AT3G27550
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G27550
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G27550
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G27550

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G27550

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040286 CRM domain-containing protein At3g25440-like
IPR035920 YhbY-like superfamily
IPR001890 RNA-binding, CRM domain
Mapman id Description
16.11.4.2.7 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.splicing factor (CFM9)