Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031786.1 Olea europaea HOM05D003955 ORTHO05D004684 1.0e-72 276.6 131 100.0
MSTRG.9290 Avicennia marina HOM05D003955 ORTHO05D004684 6.2e-54 214.2 131 80.9
Oeu061232.2 Olea europaea HOM05D003955 ORTHO05D004684 8.1e-54 213.8 131 80.9
Peaxi162Scf00683g00157 Petunia axillaris HOM05D003955 ORTHO05D004684 8.9e-53 210.3 131 80.2
Nitab4.5_0001158g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 2.0e-52 209.1 131 80.2
Dinv05158 Davidia involucrata HOM05D003955 ORTHO05D004684 2.6e-52 208.8 131 78.6
Nn4g24112 Nelumbo nucifera HOM05D003955 ORTHO05D004684 2.6e-52 208.8 130 77.7
Migut.D01456 Erythranthe guttata HOM05D003955 ORTHO05D004684 3.4e-52 208.4 131 79.4
Nitab4.5_0001644g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 3.4e-52 208.4 131 80.2
PGSC0003DMG400005655 Solanum tuberosum HOM05D003955 ORTHO05D004684 4.4e-52 208.0 131 79.4
Sopen03g037980 Solanum pennellii HOM05D003955 ORTHO05D004684 7.6e-52 207.2 131 79.4
Dinv26502 Davidia involucrata HOM05D003955 ORTHO05D004684 9.9e-52 206.8 131 79.4
Atru.chr11.420 Acer truncatum HOM05D003955 ORTHO05D004684 1.7e-51 206.1 131 77.1
TAR622G0688 Trochodendron aralioides HOM05D003955 ORTHO05D004684 2.2e-51 205.7 131 77.1
CSS0005322 Camellia sinensis var. sinensis HOM05D003955 ORTHO05D004684 2.9e-51 205.3 131 77.9
COL.COLO4_20464 Corchorus olitorius HOM05D003955 ORTHO05D004684 2.9e-51 205.3 131 77.9
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 4.9e-51 204.5 131 76.3
Solyc03g119090.3 Solanum lycopersicum HOM05D003955 ORTHO05D004684 6.4e-51 204.1 131 78.6
HanXRQChr10g0314661 Helianthus annuus HOM05D003955 ORTHO05D004684 1.4e-50 203.0 131 75.6
Hma1.2p1_0669F.1_g200270 Hydrangea macrophylla HOM05D003955 ORTHO05D004684 1.4e-50 203.0 131 77.9
TAR374G0009 Trochodendron aralioides HOM05D003955 ORTHO05D004684 2.4e-50 202.2 131 75.6
Lsat_1_v5_gn_5_91461 Lactuca sativa HOM05D003955 ORTHO05D004684 3.2e-50 201.8 131 74.8
Cpa.g.sc211.2 Carica papaya HOM05D003955 ORTHO05D004684 4.1e-50 201.4 131 76.3
SGA_v2.0_scaffold25G10972 Striga asiatica HOM05D003955 ORTHO05D004684 5.4e-50 201.1 131 75.6
ECA234G1883 Erigeron canadensis HOM05D003955 ORTHO05D004684 9.2e-50 200.3 131 74.0
Lj5g0018825 Lotus japonicus HOM05D003955 ORTHO05D004684 9.2e-50 200.3 131 76.3
Gohir.A01G153300 Gossypium hirsutum HOM05D003955 ORTHO05D004684 2.7e-49 198.7 131 74.8
Gorai.002G180400 Gossypium raimondii HOM05D003955 ORTHO05D004684 2.7e-49 198.7 131 74.8
Actinidia18907 Actinidia chinensis HOM05D003955 ORTHO05D004684 3.5e-49 198.4 132 75.8
Gohir.D01G099700 Gossypium hirsutum HOM05D003955 ORTHO05D004684 3.5e-49 198.4 131 74.0
Phvul.007G038100 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 3.5e-49 198.4 131 74.0
Medtr1g107560 Medicago truncatula HOM05D003955 ORTHO05D004684 6.0e-49 197.6 131 74.0
Psat6g220280 Pisum sativum HOM05D003955 ORTHO05D004684 6.0e-49 197.6 131 74.0
TPR.G13862 Trifolium pratense HOM05D003955 ORTHO05D004684 6.0e-49 197.6 131 74.0
Actinidia35113 Actinidia chinensis HOM05D003955 ORTHO05D004684 7.8e-49 197.2 132 75.8
Aqoxy3G04013 Aquilegia oxysepala HOM05D003955 ORTHO05D004684 7.8e-49 197.2 131 74.0
Cc04_g06570 Coffea canephora HOM05D003955 ORTHO05D004684 7.8e-49 197.2 130 76.2
Rhsim12G0139700 Rhododendron simsii HOM05D003955 ORTHO05D004684 7.8e-49 197.2 132 76.5
VMungo0720G1874 Vigna mungo HOM05D003955 ORTHO05D004684 7.8e-49 197.2 131 74.8
GSVIVG01008399001 Vitis vinifera HOM05D003955 ORTHO05D004684 1.3e-48 196.4 131 74.0
Lj6A27G8 Lonicera japonica HOM05D003955 ORTHO05D004684 2.3e-48 195.7 128 75.8
PSO782G1387 Papaver somniferum HOM05D003955 ORTHO05D004684 2.3e-48 195.7 131 74.0
Thhalv10000821m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 3.0e-48 195.3 130 74.6
Manes.15G126700 Manihot esculenta HOM05D003955 ORTHO05D004684 3.0e-48 195.3 131 74.8
PSO063G1948 Papaver somniferum HOM05D003955 ORTHO05D004684 3.0e-48 195.3 131 73.3
vmacro16423 Vaccinium macrocarpon HOM05D003955 ORTHO05D004684 3.0e-48 195.3 132 75.8
Lalb_Chr06g0165541 Lupinus albus HOM05D003955 ORTHO05D004684 3.9e-48 194.9 131 74.0
Lj2A556T29 Lonicera japonica HOM05D003955 ORTHO05D004684 5.1e-48 194.5 128 75.0
Aa31LG2G8590 Aethionema arabicum HOM05D003955 ORTHO05D004684 6.6e-48 194.1 130 73.8
FAN04G3226 Fragaria x ananassa HOM05D003955 ORTHO05D004684 6.6e-48 194.1 131 74.0
FvH4_5g17110 Fragaria vesca HOM05D003955 ORTHO05D004684 8.6e-48 193.7 131 74.0
FAN08G2535 Fragaria x ananassa HOM05D003955 ORTHO05D004684 8.6e-48 193.7 131 74.0
FAN13G1787 Fragaria x ananassa HOM05D003955 ORTHO05D004684 8.6e-48 193.7 131 74.0
FAN18G0775 Fragaria x ananassa HOM05D003955 ORTHO05D004684 8.6e-48 193.7 131 74.0
Sp2g12780 Schrenkiella parvula HOM05D003955 ORTHO05D004684 8.6e-48 193.7 130 73.8
THA.LOC104823875 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 8.6e-48 193.7 131 74.0
Carub.0005s0030 Capsella rubella HOM05D003955 ORTHO05D004684 1.1e-47 193.4 130 73.8
Glyma.20G126400 Glycine max HOM05D003955 ORTHO05D004684 1.1e-47 193.4 131 72.5
Ciclev10014635m.g Citrus clementina HOM05D003955 ORTHO05D004684 1.5e-47 193.0 128 73.4
Thecc.03G050300 Theobroma cacao HOM05D003955 ORTHO05D004684 1.5e-47 193.0 131 74.0
AL5G10290 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 1.9e-47 192.6 130 73.1
arahy.Tifrunner.gnm1.ann1.I5E1T8 Arachis hypogaea HOM05D003955 ORTHO05D004684 1.9e-47 192.6 131 71.0
arahy.Tifrunner.gnm1.ann1.MW1RK6 Arachis hypogaea HOM05D003955 ORTHO05D004684 1.9e-47 192.6 131 71.0
Ca_27465_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 1.9e-47 192.6 132 73.5
RcHm_v2.0_Chr7g0178701 Rosa chinensis HOM05D003955 ORTHO05D004684 1.9e-47 192.6 131 73.3
THA.LOC104820357 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 2.5e-47 192.2 131 73.3
CARHR143850 Cardamine hirsuta HOM05D003955 ORTHO05D004684 3.3e-47 191.8 130 73.1
AUR62014196 Chenopodium quinoa HOM05D003955 ORTHO05D004684 3.3e-47 191.8 128 75.8
AUR62041238 Chenopodium quinoa HOM05D003955 ORTHO05D004684 3.3e-47 191.8 128 75.8
Prupe.5G230600 Prunus persica HOM05D003955 ORTHO05D004684 3.3e-47 191.8 131 73.3
Sc11g0004100 Simmondsia chinensis HOM05D003955 ORTHO05D004684 3.3e-47 191.8 131 73.3
BcaB07g30749 Brassica carinata HOM05D003955 ORTHO05D004684 4.3e-47 191.4 130 73.1
BcaC04g21593 Brassica carinata HOM05D003955 ORTHO05D004684 4.3e-47 191.4 130 73.1
A09p23310 Brassica napus HOM05D003955 ORTHO05D004684 4.3e-47 191.4 130 73.1
C09p30050 Brassica napus HOM05D003955 ORTHO05D004684 4.3e-47 191.4 130 73.1
BolC9t55869H Brassica oleracea HOM05D003955 ORTHO05D004684 4.3e-47 191.4 130 73.1
BraA09t37932Z Brassica rapa HOM05D003955 ORTHO05D004684 4.3e-47 191.4 130 73.1
Thhalv10020321m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 9.6e-47 190.3 129 72.9
Aa31LG8G4920 Aethionema arabicum HOM05D003955 ORTHO05D004684 1.2e-46 189.9 129 73.6
Sp3g16180 Schrenkiella parvula HOM05D003955 ORTHO05D004684 1.6e-46 189.5 129 72.9
CANSAT80G2537 Cannabis sativa HOM05D003955 ORTHO05D004684 2.1e-46 189.1 131 74.0
Ciclev10007782m.g Citrus clementina HOM05D003955 ORTHO05D004684 2.8e-46 188.7 131 73.3
EL10Ac6g14239 Beta vulgaris HOM05D003955 ORTHO05D004684 3.6e-46 188.3 128 74.2
MD14G1234400 Malus domestica HOM05D003955 ORTHO05D004684 3.6e-46 188.3 129 73.6
CARHR093380 Cardamine hirsuta HOM05D003955 ORTHO05D004684 4.7e-46 188.0 129 72.1
Hund20688 Selenicereus undatus HOM05D003955 ORTHO05D004684 4.7e-46 188.0 131 72.5
Gohir.D11G003500 Gossypium hirsutum HOM05D003955 ORTHO05D004684 6.2e-46 187.6 131 71.8
Gorai.007G004500 Gossypium raimondii HOM05D003955 ORTHO05D004684 6.2e-46 187.6 131 71.8
MD06G1229500 Malus domestica HOM05D003955 ORTHO05D004684 6.2e-46 187.6 129 72.9
CDE04G0774 Ceratophyllum demersum HOM05D003955 ORTHO05D004684 1.4e-45 186.4 131 69.5
QL10p027883 Quercus lobata HOM05D003955 ORTHO05D004684 2.4e-45 185.7 131 71.0
Cfa019689 Carpinus fangiana HOM05D003955 ORTHO05D004684 3.1e-45 185.3 131 70.2
Haze_18797 Corylus avellana HOM05D003955 ORTHO05D004684 3.1e-45 185.3 131 70.2
Gohir.A11G004000 Gossypium hirsutum HOM05D003955 ORTHO05D004684 4.0e-45 184.9 131 71.0
TWI15G0606 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 4.0e-45 184.9 131 70.2
Sabra15G0055900 Salix brachista HOM05D003955 ORTHO05D004684 5.2e-45 184.5 131 71.0
Sabra15G0063600 Salix brachista HOM05D003955 ORTHO05D004684 5.2e-45 184.5 131 71.0
Potri.012G049200 Populus trichocarpa HOM05D003955 ORTHO05D004684 6.8e-45 184.1 131 70.2
Potri.015G041200 Populus trichocarpa HOM05D003955 ORTHO05D004684 6.8e-45 184.1 131 70.2
Sed0014282 Sechium edule HOM05D003955 ORTHO05D004684 6.8e-45 184.1 129 71.3
Sed0001638 Sechium edule HOM05D003955 ORTHO05D004684 8.9e-45 183.7 129 71.3
AT2G01330 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 1.2e-44 183.3 130 70.0
ATR0686G116 Amborella trichopoda HOM05D003955 ORTHO05D004684 1.5e-44 183.0 132 70.5
MELO3C017347.2 Cucumis melo HOM05D003955 ORTHO05D004684 1.5e-44 183.0 129 71.3
DCAR_014770 Daucus carota HOM05D003955 ORTHO05D004684 1.5e-44 183.0 131 68.7
Lalb_Chr05g0221841 Lupinus albus HOM05D003955 ORTHO05D004684 1.5e-44 183.0 129 72.1
ClCG06G014440 Citrullus lanatus HOM05D003955 ORTHO05D004684 2.0e-44 182.6 129 70.5
PGR083G2578 Punica granatum HOM05D003955 ORTHO05D004684 2.0e-44 182.6 130 69.2
DCAR_023230 Daucus carota HOM05D003955 ORTHO05D004684 2.6e-44 182.2 131 66.4
Sabra12G0034600 Salix brachista HOM05D003955 ORTHO05D004684 2.6e-44 182.2 131 69.5
Cpa.g.sc3.440 Carica papaya HOM05D003955 ORTHO05D004684 3.4e-44 181.8 131 70.2
CiPaw.15G139700 Carya illinoinensis HOM05D003955 ORTHO05D004684 3.4e-44 181.8 131 69.5
Hund24990 Selenicereus undatus HOM05D003955 ORTHO05D004684 3.4e-44 181.8 131 69.5
Lj4g0027787 Lotus japonicus HOM05D003955 ORTHO05D004684 4.4e-44 181.4 129 69.8
TWI81G0555 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 4.4e-44 181.4 131 69.5
CsaV3_1G004220 Cucumis sativus L. HOM05D003955 ORTHO05D004684 5.8e-44 181.0 129 70.5
Carub.0003s1778 Capsella rubella HOM05D003955 ORTHO05D004684 7.6e-44 180.6 129 69.0
AT3G18060 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 9.9e-44 180.3 129 69.0
Manes.06G008300 Manihot esculenta HOM05D003955 ORTHO05D004684 9.9e-44 180.3 131 69.5
AL3G31220 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 1.3e-43 179.9 129 69.0
Phvul.002G327600 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 2.2e-43 179.1 129 69.0
Ca_17215_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 2.9e-43 178.7 128 69.5
Ca_17217_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 2.9e-43 178.7 128 69.5
Eucgr.K02263 Eucalyptus grandis HOM05D003955 ORTHO05D004684 2.9e-43 178.7 133 67.7
Psat7g000120 Pisum sativum HOM05D003955 ORTHO05D004684 6.4e-43 177.6 129 68.2
VMungo0251G3447 Vigna mungo HOM05D003955 ORTHO05D004684 8.4e-43 177.2 129 68.2
BcaC05g28709 Brassica carinata HOM05D003955 ORTHO05D004684 1.1e-42 176.8 129 69.0
A05p31710 Brassica napus HOM05D003955 ORTHO05D004684 1.4e-42 176.4 128 68.8
C05p48110 Brassica napus HOM05D003955 ORTHO05D004684 1.4e-42 176.4 128 68.8
BolC5t33552H Brassica oleracea HOM05D003955 ORTHO05D004684 1.4e-42 176.4 128 68.8
BraA05t22004Z Brassica rapa HOM05D003955 ORTHO05D004684 1.4e-42 176.4 128 68.8
TPR.G12747 Trifolium pratense HOM05D003955 ORTHO05D004684 3.2e-42 175.3 129 66.7
COL.COLO4_22318 Corchorus olitorius HOM05D003955 ORTHO05D004684 4.2e-42 174.9 130 67.7
Glyma.08G051900 Glycine max HOM05D003955 ORTHO05D004684 5.4e-42 174.5 129 65.9
Medtr8g106820 Medicago truncatula HOM05D003955 ORTHO05D004684 5.4e-42 174.5 129 67.4
Glyma.05G243900 Glycine max HOM05D003955 ORTHO05D004684 1.2e-41 173.3 129 65.9
HPP92_000152 Vanilla planifolia HOM05D003955 ORTHO05D004684 1.2e-41 173.3 123 68.3
Zm00001eb334960 Zea mays HOM05D003955 ORTHO05D004684 1.5e-39 166.4 131 61.1
Zm00001eb125700 Zea mays HOM05D003955 ORTHO05D004684 4.3e-39 164.9 131 60.3
Os01g0125800 Oryza sativa ssp. japonica HOM05D003955 ORTHO05D004684 7.3e-39 164.1 131 60.3
Mapoly0025s0096 Marchantia polymorpha HOM05D003955 ORTHO05D004684 5.3e-37 157.9 131 60.3
Pp3c3_9960 Physcomitrium patens HOM05D003955 ORTHO05D004684 7.6e-36 154.1 131 58.0
SMO298G0047 Selaginella moellendorffii HOM05D003955 ORTHO05D004684 1.3e-35 153.3 127 60.6
AagrBONN_evm.TU.Sc2ySwM_340.157 Anthoceros agrestis HOM05D003955 ORTHO05D004684 1.3e-32 143.3 131 54.2
Ah.03g138590 Amaranthus hybridus HOM05D003955 ORTHO05D004684 5.8e-28 127.9 123 58.5
BolC5t33521H Brassica oleracea HOM05D003955 ORTHO05D004684 3.9e-24 115.2 127 50.4
MCO02G121 Micromonas commoda HOM05D003955 ORTHO05D004684 4.8e-22 108.2 129 41.9
Haze_27019 Corylus avellana HOM05D003955 ORTHO05D004684 9.3e-18 94.0 117 42.7
Actinidia37893 Actinidia chinensis HOM05D003955 ORTHO05D004684 3.3e-15 85.5 53 77.4
PRCOL_00004882 Prasinoderma coloniale HOM05D003955 ORTHO05D004684 1.8e-13 79.7 136 34.6


User provided reference genes

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