Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029421.1 Olea europaea HOM05D005876 ORTHO05D007326 1.7e-51 205.7 101 100.0
Oeu060085.1 Olea europaea HOM05D005876 ORTHO05D007326 1.0e-32 143.3 83 88.0
Cc11_g02990 Coffea canephora HOM05D005876 ORTHO05D007326 6.7e-24 114.0 92 59.8
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 1.1e-23 113.2 94 66.0
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 2.8e-22 108.6 92 63.0
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 3.7e-22 108.2 89 64.0
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 3.7e-22 108.2 92 59.8
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 6.3e-22 107.5 92 62.0
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 6.3e-22 107.5 92 62.0
AUR62040047 Chenopodium quinoa HOM05D005876 ORTHO05D007326 1.8e-21 105.9 93 58.1
EL10Ac7g17355 Beta vulgaris HOM05D005876 ORTHO05D007326 6.9e-21 104.0 86 59.3
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 1.5e-20 102.8 100 52.0
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 1.5e-20 102.8 96 62.5
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 2.0e-20 102.4 88 60.2
Sc23g0005710 Simmondsia chinensis HOM05D005876 ORTHO05D007326 2.6e-20 102.1 89 56.2
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 3.4e-20 101.7 98 58.2
CSS0006806 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 4.5e-20 101.3 94 57.4
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 4.5e-20 101.3 94 57.4
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 7.7e-20 100.5 90 63.3
Eucgr.D00282 Eucalyptus grandis HOM05D005876 ORTHO05D007326 7.7e-20 100.5 88 59.1
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 1.0e-19 100.1 88 59.1
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 1.7e-19 99.4 90 56.7
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 1.7e-19 99.4 90 57.8
Sc15g0002680 Simmondsia chinensis HOM05D005876 ORTHO05D007326 1.7e-19 99.4 83 60.2
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 1.7e-19 99.4 92 57.6
TAR636G2100 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.7e-19 99.4 93 57.0
PSO063G1014 Papaver somniferum HOM05D005876 ORTHO05D007326 2.2e-19 99.0 89 59.6
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 2.9e-19 98.6 95 55.8
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 3.8e-19 98.2 89 55.1
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 5.0e-19 97.8 89 58.4
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 5.0e-19 97.8 92 56.5
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 5.0e-19 97.8 90 56.7
Nitab4.5_0005274g0030 Nicotiana tabacum HOM05D005876 ORTHO05D007326 6.5e-19 97.4 84 61.9
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 6.5e-19 97.4 92 55.4
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 6.5e-19 97.4 89 56.2
Nitab4.5_0001763g0100 Nicotiana tabacum HOM05D005876 ORTHO05D007326 1.1e-18 96.7 92 57.6
Peaxi162Scf00005g04511 Petunia axillaris HOM05D005876 ORTHO05D007326 1.1e-18 96.7 90 56.7
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 1.4e-18 96.3 78 65.4
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 1.9e-18 95.9 90 57.8
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 2.5e-18 95.5 78 65.4
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 2.5e-18 95.5 89 55.1
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 2.5e-18 95.5 93 54.8
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 3.2e-18 95.1 93 55.9
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 3.2e-18 95.1 94 54.3
CDE05G1905 Ceratophyllum demersum HOM05D005876 ORTHO05D007326 4.2e-18 94.7 81 56.8
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 9.4e-18 93.6 92 55.4
Nitab4.5_0000669g0240 Nicotiana tabacum HOM05D005876 ORTHO05D007326 9.4e-18 93.6 78 64.1
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 1.2e-17 93.2 89 53.9
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 1.6e-17 92.8 92 55.4
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 2.1e-17 92.4 93 49.5
THA.LOC104826952 Tarenaya hassleriana HOM05D005876 ORTHO05D007326 2.1e-17 92.4 89 50.6
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 3.6e-17 91.7 89 55.1
COL.COLO4_06720 Corchorus olitorius HOM05D005876 ORTHO05D007326 4.7e-17 91.3 93 53.8
Glyma.01G229300 Glycine max HOM05D005876 ORTHO05D007326 4.7e-17 91.3 90 54.4
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 4.7e-17 91.3 92 54.3
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 4.7e-17 91.3 88 55.7
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 6.1e-17 90.9 92 53.3
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 6.1e-17 90.9 92 54.3
vmacro08700 Vaccinium macrocarpon HOM05D005876 ORTHO05D007326 1.0e-16 90.1 94 52.1
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 1.8e-16 89.4 90 53.3
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 1.8e-16 89.4 93 54.8
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 2.3e-16 89.0 94 50.0
Duzib106G1607 Durio zibethinus HOM05D005876 ORTHO05D007326 5.1e-16 87.8 92 53.3
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 5.1e-16 87.8 92 52.2
Lj1g0007669 Lotus japonicus HOM05D005876 ORTHO05D007326 5.1e-16 87.8 81 58.0
LjContig00222g0022274 Lotus japonicus HOM05D005876 ORTHO05D007326 5.1e-16 87.8 81 58.0
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 5.1e-16 87.8 87 52.9
PGR083G2396 Punica granatum HOM05D005876 ORTHO05D007326 6.7e-16 87.4 100 47.0
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 6.7e-16 87.4 90 53.3
AT2G43190 Arabidopsis thaliana HOM05D005876 ORTHO05D007326 1.5e-15 86.3 89 48.3
CARHR138250 Cardamine hirsuta HOM05D005876 ORTHO05D007326 2.0e-15 85.9 89 48.3
Peaxi162Scf01604g00016 Petunia axillaris HOM05D005876 ORTHO05D007326 2.6e-15 85.5 72 65.3
AL4G41850 Arabidopsis lyrata HOM05D005876 ORTHO05D007326 3.3e-15 85.1 89 47.2
Ah.16g107680 Amaranthus hybridus HOM05D005876 ORTHO05D007326 4.4e-15 84.7 86 54.7
Carub.0004s2566 Capsella rubella HOM05D005876 ORTHO05D007326 4.4e-15 84.7 89 47.2
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 5.7e-15 84.3 91 51.6
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea HOM05D005876 ORTHO05D007326 9.7e-15 83.6 90 51.1
TPR.G38017 Trifolium pratense HOM05D005876 ORTHO05D007326 9.7e-15 83.6 90 50.0
Aqoxy4G03207 Aquilegia oxysepala HOM05D005876 ORTHO05D007326 1.7e-14 82.8 83 49.4
Lsat_1_v5_gn_3_120281 Lactuca sativa HOM05D005876 ORTHO05D007326 1.7e-14 82.8 84 56.0
Lalb_Chr01g0022971 Lupinus albus HOM05D005876 ORTHO05D007326 3.7e-14 81.6 87 50.6
Aa31LG1G25010 Aethionema arabicum HOM05D005876 ORTHO05D007326 6.3e-14 80.9 89 49.4
HPP92_015422 Vanilla planifolia HOM05D005876 ORTHO05D007326 6.3e-14 80.9 91 46.2
MD04G1104000 Malus domestica HOM05D005876 ORTHO05D007326 1.4e-13 79.7 87 50.6
HPP92_026974 Vanilla planifolia HOM05D005876 ORTHO05D007326 1.4e-13 79.7 91 45.1
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea HOM05D005876 ORTHO05D007326 1.8e-13 79.3 90 48.9
HanXRQChr07g0195281 Helianthus annuus HOM05D005876 ORTHO05D007326 1.8e-13 79.3 83 50.6
ECA238G3410 Erigeron canadensis HOM05D005876 ORTHO05D007326 4.1e-13 78.2 78 57.7
Sed0002034 Sechium edule HOM05D005876 ORTHO05D007326 7.0e-13 77.4 93 45.2
SHI12568 Sapria himalayana HOM05D005876 ORTHO05D007326 9.1e-13 77.0 83 53.0
MELO3C009318.2 Cucumis melo HOM05D005876 ORTHO05D007326 1.2e-12 76.6 89 49.4
CsaV3_3G035590 Cucumis sativus L. HOM05D005876 ORTHO05D007326 1.2e-12 76.6 90 45.6
ClCG10G020530 Citrullus lanatus HOM05D005876 ORTHO05D007326 3.5e-12 75.1 90 46.7
A05p03670 Brassica napus HOM05D005876 ORTHO05D007326 4.5e-12 74.7 93 46.2
Sp4g25310 Schrenkiella parvula HOM05D005876 ORTHO05D007326 5.9e-12 74.3 90 43.3
DCAR_009286 Daucus carota HOM05D005876 ORTHO05D007326 7.7e-12 73.9 94 45.7
C04p04270 Brassica napus HOM05D005876 ORTHO05D007326 1.7e-11 72.8 94 43.6
BolC4t22063H Brassica oleracea HOM05D005876 ORTHO05D007326 1.7e-11 72.8 94 43.6
BraA05t19352Z Brassica rapa HOM05D005876 ORTHO05D007326 2.2e-11 72.4 93 45.2
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 2.2e-11 72.4 92 45.7
ATR0618G001 Amborella trichopoda HOM05D005876 ORTHO05D007326 2.9e-11 72.0 91 46.2
Thhalv10001741m.g Eutrema salsugineum HOM05D005876 ORTHO05D007326 1.5e-10 69.7 93 40.9
Nitab4.5_0002614g0010 Nicotiana tabacum HOM05D005876 ORTHO05D007326 7.2e-10 67.4 85 49.4
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 2.1e-09 65.9 91 42.9
Os05g0472300 Oryza sativa ssp. japonica HOM05D005876 ORTHO05D007326 3.0e-08 62.0 81 40.7
Zm00001eb290190 Zea mays HOM05D005876 ORTHO05D007326 3.0e-08 62.0 81 42.0
Medtr5g007880 Medicago truncatula HOM05D005876 ORTHO05D007326 9.7e-07 57.0 54 57.4
Ca_24451_v3 Cicer arietinum L. HOM05D005876 ORTHO05D007326 2.2e-06 55.8 43 58.1
Zm00001eb270830 Zea mays HOM05D005876 ORTHO05D007326 2.2e-06 55.8 74 43.2
Psat0s769g0080 Pisum sativum HOM05D005876 ORTHO05D007326 2.8e-06 55.5 52 57.7


User provided reference genes

Program Settings