Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029134.1 Olea europaea HOM05D003534 ORTHO05D004911 1.4e-75 286.2 147 100.0
Oeu011084.1 Olea europaea HOM05D003534 ORTHO05D004911 1.9e-56 222.6 138 81.9
Dinv23505 Davidia involucrata HOM05D003534 ORTHO05D004911 1.2e-53 213.4 138 78.3
Rhsim11G0178800 Rhododendron simsii HOM05D003534 ORTHO05D004911 1.1e-51 206.8 138 78.3
vmacro02092 Vaccinium macrocarpon HOM05D003534 ORTHO05D004911 4.2e-51 204.9 138 78.3
TAR376G0939 Trochodendron aralioides HOM05D003534 ORTHO05D004911 1.2e-50 203.4 138 73.9
Cc02_g17370 Coffea canephora HOM05D003534 ORTHO05D004911 2.1e-50 202.6 138 73.9
SGA_v2.0_scaffold58G20518 Striga asiatica HOM05D003534 ORTHO05D004911 3.6e-50 201.8 140 71.4
ClCG11G004310 Citrullus lanatus HOM05D003534 ORTHO05D004911 7.9e-50 200.7 139 73.4
Nn3g20273 Nelumbo nucifera HOM05D003534 ORTHO05D004911 1.8e-49 199.5 138 72.5
Nn8g40768 Nelumbo nucifera HOM05D003534 ORTHO05D004911 1.8e-49 199.5 138 73.2
MBI16_g05475_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D004911 2.3e-49 199.1 138 71.7
CSS0034094 Camellia sinensis var. sinensis HOM05D003534 ORTHO05D004911 5.1e-49 198.0 143 72.7
Ca_20885_v3 Cicer arietinum L. HOM05D003534 ORTHO05D004911 2.0e-48 196.1 139 73.4
Oeu029149.3 Olea europaea HOM05D003534 ORTHO05D004911 2.0e-48 196.1 139 79.1
TPR.G22546 Trifolium pratense HOM05D003534 ORTHO05D004911 4.4e-48 194.9 139 71.9
Lj3g0020150 Lotus japonicus HOM05D003534 ORTHO05D004911 5.7e-48 194.5 140 72.9
MSTRG.27693 Avicennia marina HOM05D003534 ORTHO05D004911 7.4e-48 194.1 142 71.1
Sed0008343 Sechium edule HOM05D003534 ORTHO05D004911 7.4e-48 194.1 139 71.2
FAN15G3506 Fragaria x ananassa HOM05D003534 ORTHO05D004911 9.7e-48 193.7 136 72.8
FAN24G0084 Fragaria x ananassa HOM05D003534 ORTHO05D004911 9.7e-48 193.7 137 72.3
FvH4_2g09160 Fragaria vesca HOM05D003534 ORTHO05D004911 1.3e-47 193.4 137 72.3
Psat7g184360 Pisum sativum HOM05D003534 ORTHO05D004911 2.2e-47 192.6 136 72.8
SalBow3G2606 Salvia bowleyana HOM05D003534 ORTHO05D004911 2.2e-47 192.6 138 68.8
FAN27G1894 Fragaria x ananassa HOM05D003534 ORTHO05D004911 2.8e-47 192.2 136 72.8
Lalb_Chr01g0002481 Lupinus albus HOM05D003534 ORTHO05D004911 2.8e-47 192.2 139 73.4
Lalb_Chr03g0025601 Lupinus albus HOM05D003534 ORTHO05D004911 2.8e-47 192.2 140 74.3
Glyma.11G116800 Glycine max HOM05D003534 ORTHO05D004911 3.7e-47 191.8 139 72.7
VMungo1127G1107 Vigna mungo HOM05D003534 ORTHO05D004911 3.7e-47 191.8 140 71.4
CiPaw.05G066400 Carya illinoinensis HOM05D003534 ORTHO05D004911 6.3e-47 191.0 139 70.5
MELO3C023306.2 Cucumis melo HOM05D003534 ORTHO05D004911 6.3e-47 191.0 139 70.5
CsaV3_2G014840 Cucumis sativus L. HOM05D003534 ORTHO05D004911 8.2e-47 190.7 139 69.8
RcHm_v2.0_Chr6g0265021 Rosa chinensis HOM05D003534 ORTHO05D004911 2.4e-46 189.1 136 72.1
Actinidia00534 Actinidia chinensis HOM05D003534 ORTHO05D004911 3.1e-46 188.7 138 72.5
Medtr4g078640 Medicago truncatula HOM05D003534 ORTHO05D004911 3.1e-46 188.7 141 69.5
FAN20G2815 Fragaria x ananassa HOM05D003534 ORTHO05D004911 4.1e-46 188.3 135 70.4
Cpa.g.sc62.164 Carica papaya HOM05D003534 ORTHO05D004911 5.3e-46 188.0 139 70.5
Cpa.g.c31087 Carica papaya HOM05D003534 ORTHO05D004911 7.0e-46 187.6 139 70.5
Cfa004983 Carpinus fangiana HOM05D003534 ORTHO05D004911 1.2e-45 186.8 139 70.5
Eucgr.I01280 Eucalyptus grandis HOM05D003534 ORTHO05D004911 1.2e-45 186.8 139 68.3
PGR142G3854 Punica granatum HOM05D003534 ORTHO05D004911 2.0e-45 186.0 140 67.1
Duzib132G0318 Durio zibethinus HOM05D003534 ORTHO05D004911 3.4e-45 185.3 136 70.6
Phvul.011G044300 Phaseolus vulgaris HOM05D003534 ORTHO05D004911 3.4e-45 185.3 139 69.8
Glyma.12G042600 Glycine max HOM05D003534 ORTHO05D004911 5.9e-45 184.5 140 70.7
SEGI_04005 Sequoiadendron giganteum HOM05D003534 ORTHO05D004911 2.2e-44 182.6 138 63.8
SEGI_39025 Sequoiadendron giganteum HOM05D003534 ORTHO05D004911 2.2e-44 182.6 138 63.0
SEGI_39659 Sequoiadendron giganteum HOM05D003534 ORTHO05D004911 2.2e-44 182.6 138 63.0
Ciclev10027844m.g Citrus clementina HOM05D003534 ORTHO05D004911 3.8e-44 181.8 141 66.7
Migut.N01247 Erythranthe guttata HOM05D003534 ORTHO05D004911 5.0e-44 181.4 135 65.9
Atru.chr5.3044 Acer truncatum HOM05D003534 ORTHO05D004911 6.5e-44 181.0 135 70.4
Potri.009G118400 Populus trichocarpa HOM05D003534 ORTHO05D004911 6.5e-44 181.0 136 69.1
Thecc.02G083000 Theobroma cacao HOM05D003534 ORTHO05D004911 6.5e-44 181.0 140 67.9
arahy.Tifrunner.gnm1.ann1.32LR34 Arachis hypogaea HOM05D003534 ORTHO05D004911 8.5e-44 180.6 139 68.3
QL11p044502 Quercus lobata HOM05D003534 ORTHO05D004911 8.5e-44 180.6 142 66.9
COL.COLO4_25956 Corchorus olitorius HOM05D003534 ORTHO05D004911 3.2e-43 178.7 136 67.6
Sc22g0003200 Simmondsia chinensis HOM05D003534 ORTHO05D004911 4.2e-43 178.3 143 65.7
arahy.Tifrunner.gnm1.ann1.HU7T3D Arachis hypogaea HOM05D003534 ORTHO05D004911 7.2e-43 177.6 139 66.9
CANSAT01G2206 Cannabis sativa HOM05D003534 ORTHO05D004911 7.2e-43 177.6 139 66.2
ECA234G0458 Erigeron canadensis HOM05D003534 ORTHO05D004911 9.4e-43 177.2 140 67.1
unitig_21.g20784 Utricularia gibba HOM05D003534 ORTHO05D004911 9.4e-43 177.2 129 67.4
Gohir.D02G216500 Gossypium hirsutum HOM05D003534 ORTHO05D004911 1.6e-42 176.4 142 64.8
Gorai.005G244600 Gossypium raimondii HOM05D003534 ORTHO05D004911 1.6e-42 176.4 142 64.8
MD10G1073000 Malus domestica HOM05D003534 ORTHO05D004911 1.6e-42 176.4 136 68.4
Gohir.A03G195500 Gossypium hirsutum HOM05D003534 ORTHO05D004911 3.6e-42 175.3 142 64.8
Manes.04G089300 Manihot esculenta HOM05D003534 ORTHO05D004911 4.7e-42 174.9 126 65.9
CDE06G1392 Ceratophyllum demersum HOM05D003534 ORTHO05D004911 1.0e-41 173.7 138 63.0
CDE08G0557 Ceratophyllum demersum HOM05D003534 ORTHO05D004911 1.0e-41 173.7 135 65.2
DCAR_001567 Daucus carota HOM05D003534 ORTHO05D004911 1.8e-41 172.9 144 61.1
Lj5A195T78 Lonicera japonica HOM05D003534 ORTHO05D004911 1.8e-41 172.9 141 64.5
Nitab4.5_0000167g0310 Nicotiana tabacum HOM05D003534 ORTHO05D004911 3.9e-41 171.8 140 62.9
Carub.0007s1523 Capsella rubella HOM05D003534 ORTHO05D004911 6.7e-41 171.0 141 58.9
Thhalv10024417m.g Eutrema salsugineum HOM05D003534 ORTHO05D004911 8.8e-41 170.6 139 61.9
Lj4C693T2 Lonicera japonica HOM05D003534 ORTHO05D004911 8.8e-41 170.6 138 64.5
AL6G48970 Arabidopsis lyrata HOM05D003534 ORTHO05D004911 2.0e-40 169.5 136 62.5
Sabra09G0090700 Salix brachista HOM05D003534 ORTHO05D004911 2.6e-40 169.1 139 64.7
TWI79G0037 Tripterygium wilfordii HOM05D003534 ORTHO05D004911 2.6e-40 169.1 147 63.9
Prupe.8G094400 Prunus persica HOM05D003534 ORTHO05D004911 5.7e-40 167.9 136 64.7
PSO541G3604 Papaver somniferum HOM05D003534 ORTHO05D004911 7.4e-40 167.5 152 58.6
PSO675G2831 Papaver somniferum HOM05D003534 ORTHO05D004911 7.4e-40 167.5 152 58.6
AL7G27310 Arabidopsis lyrata HOM05D003534 ORTHO05D004911 1.3e-39 166.8 139 57.6
BcaC07g38209 Brassica carinata HOM05D003534 ORTHO05D004911 1.3e-39 166.8 139 59.7
BolC8t48630H Brassica oleracea HOM05D003534 ORTHO05D004911 1.3e-39 166.8 139 59.7
MD05G1064300 Malus domestica HOM05D003534 ORTHO05D004911 1.7e-39 166.4 139 64.0
THA.LOC104807735 Tarenaya hassleriana HOM05D003534 ORTHO05D004911 1.7e-39 166.4 136 61.8
C08p09620 Brassica napus HOM05D003534 ORTHO05D004911 2.8e-39 165.6 139 59.7
ATR0568G003 Amborella trichopoda HOM05D003534 ORTHO05D004911 3.7e-39 165.2 141 61.0
Aa31sc389G50 Aethionema arabicum HOM05D003534 ORTHO05D004911 6.3e-39 164.5 136 59.6
AT4G25730 Arabidopsis thaliana HOM05D003534 ORTHO05D004911 8.2e-39 164.1 139 56.1
CAN.G259.5 Capsicum annuum HOM05D003534 ORTHO05D004911 1.1e-38 163.7 142 59.9
Nitab4.5_0003010g0010 Nicotiana tabacum HOM05D003534 ORTHO05D004911 1.4e-38 163.3 142 59.9
A08p21010 Brassica napus HOM05D003534 ORTHO05D004911 2.4e-38 162.5 139 59.0
BraA08t34053Z Brassica rapa HOM05D003534 ORTHO05D004911 2.4e-38 162.5 139 59.0
GSVIVG01023801001 Vitis vinifera HOM05D003534 ORTHO05D004911 3.1e-38 162.2 138 62.3
CARHR233180 Cardamine hirsuta HOM05D003534 ORTHO05D004911 4.1e-38 161.8 139 56.1
C07p54510 Brassica napus HOM05D003534 ORTHO05D004911 7.0e-38 161.0 138 55.1
Lsat_1_v5_gn_5_119261 Lactuca sativa HOM05D003534 ORTHO05D004911 7.0e-38 161.0 140 62.1
Nitab4.5_0007066g0010 Nicotiana tabacum HOM05D003534 ORTHO05D004911 9.1e-38 160.6 138 60.1
Nitab4.5_0000231g0480 Nicotiana tabacum HOM05D003534 ORTHO05D004911 2.6e-37 159.1 138 59.4
Hma1.2p1_0617F.1_g190140 Hydrangea macrophylla HOM05D003534 ORTHO05D004911 4.5e-37 158.3 136 63.2
Peaxi162Scf00391g00525 Petunia axillaris HOM05D003534 ORTHO05D004911 4.5e-37 158.3 142 57.7
Sopen11g010770 Solanum pennellii HOM05D003534 ORTHO05D004911 4.5e-37 158.3 130 60.8
PSO675G9373 Papaver somniferum HOM05D003534 ORTHO05D004911 1.0e-36 157.1 139 57.6
Solyc11g020810.2 Solanum lycopersicum HOM05D003534 ORTHO05D004911 1.3e-36 156.8 130 60.0
PGSC0003DMG400009279 Solanum tuberosum HOM05D003534 ORTHO05D004911 2.9e-36 155.6 142 57.0
EL10Ac2g03296 Beta vulgaris HOM05D003534 ORTHO05D004911 8.5e-36 154.1 152 55.3
Peaxi162Scf00314g00224 Petunia axillaris HOM05D003534 ORTHO05D004911 8.5e-36 154.1 138 58.7
Sp7g23760 Schrenkiella parvula HOM05D003534 ORTHO05D004911 8.5e-36 154.1 139 56.8
Solyc11g020820.2 Solanum lycopersicum HOM05D003534 ORTHO05D004911 1.5e-35 153.3 140 55.7
BcaB05g23691 Brassica carinata HOM05D003534 ORTHO05D004911 1.9e-35 152.9 138 58.0
PGSC0003DMG400031553 Solanum tuberosum HOM05D003534 ORTHO05D004911 2.5e-35 152.5 138 57.2
BolC7t45937H Brassica oleracea HOM05D003534 ORTHO05D004911 3.2e-35 152.1 138 53.6
CANSAT35G1090 Cannabis sativa HOM05D003534 ORTHO05D004911 5.5e-35 151.4 141 58.2
Carub.0006s3329 Capsella rubella HOM05D003534 ORTHO05D004911 5.5e-35 151.4 130 56.9
Sopen10g016730 Solanum pennellii HOM05D003534 ORTHO05D004911 5.5e-35 151.4 138 56.5
Sopen10g016790 Solanum pennellii HOM05D003534 ORTHO05D004911 5.5e-35 151.4 138 56.5
ATR0579G045 Amborella trichopoda HOM05D003534 ORTHO05D004911 7.2e-35 151.0 138 57.2
Solyc10g046930.3 Solanum lycopersicum HOM05D003534 ORTHO05D004911 7.2e-35 151.0 138 56.5
BraA03t14692Z Brassica rapa HOM05D003534 ORTHO05D004911 9.4e-35 150.6 138 53.6
HanXRQChr12g0376181 Helianthus annuus HOM05D003534 ORTHO05D004911 9.4e-35 150.6 128 61.7
Hund20114 Selenicereus undatus HOM05D003534 ORTHO05D004911 9.4e-35 150.6 142 55.6
A03p56220 Brassica napus HOM05D003534 ORTHO05D004911 1.2e-34 150.2 138 54.3
HPP92_017536 Vanilla planifolia HOM05D003534 ORTHO05D004911 2.1e-34 149.4 138 54.3
PGSC0003DMG400020972 Solanum tuberosum HOM05D003534 ORTHO05D004911 6.1e-34 147.9 138 55.1
Nitab4.5_0006725g0010 Nicotiana tabacum HOM05D003534 ORTHO05D004911 1.8e-33 146.4 138 58.0
BcaC06g32787 Brassica carinata HOM05D003534 ORTHO05D004911 8.8e-33 144.1 138 52.2
Aqoxy3G00729 Aquilegia oxysepala HOM05D003534 ORTHO05D004911 2.0e-32 142.9 145 54.5
Medtr4g070380 Medicago truncatula HOM05D003534 ORTHO05D004911 5.7e-32 141.4 124 62.9
AUR62038347 Chenopodium quinoa HOM05D003534 ORTHO05D004911 3.7e-31 138.7 139 53.2
SMO361G0029 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 4.8e-31 138.3 143 51.0
Os05g0567400 Oryza sativa ssp. japonica HOM05D003534 ORTHO05D004911 1.8e-30 136.3 127 58.3
THA.LOC104804130 Tarenaya hassleriana HOM05D003534 ORTHO05D004911 9.1e-30 134.0 136 55.1
AagrBONN_evm.TU.Sc2ySwM_228.187 Anthoceros agrestis HOM05D003534 ORTHO05D004911 4.5e-29 131.7 140 48.6
Mapoly0151s0007 Marchantia polymorpha HOM05D003534 ORTHO05D004911 1.3e-28 130.2 137 50.4
Sopen11g010760 Solanum pennellii HOM05D003534 ORTHO05D004911 1.7e-28 129.8 138 48.6
Zm00001eb343980 Zea mays HOM05D003534 ORTHO05D004911 2.2e-28 129.4 126 50.8
Zm00001eb296160 Zea mays HOM05D003534 ORTHO05D004911 3.8e-28 128.6 126 50.0
SMO361G0155 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 3.6e-26 122.1 147 46.9
SMO361G0409 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 3.6e-26 122.1 147 46.9
SMO361G0744 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 8.8e-25 117.5 128 50.0
Pp3c2_28180 Physcomitrium patens HOM05D003534 ORTHO05D004911 2.2e-23 112.8 126 47.6
Pp3c2_28182 Physcomitrium patens HOM05D003534 ORTHO05D004911 2.2e-23 112.8 126 47.6
Ah.11g039060 Amaranthus hybridus HOM05D003534 ORTHO05D004911 5.9e-21 104.8 129 44.2
CBR_g6403 Chara braunii HOM05D003534 ORTHO05D004911 6.6e-20 101.3 137 43.1
PSO170G1266 Papaver somniferum HOM05D034905 ORTHO05D004911 3.3e-19 99.0 99 48.5
PSO170G1701 Papaver somniferum HOM05D003534 ORTHO05D004911 3.3e-19 99.0 99 48.5
ClCG11G000160 Citrullus lanatus HOM05D001035 ORTHO05D001045 2.1e-18 96.3 124 50.0
AUR62037043 Chenopodium quinoa HOM05D003534 ORTHO05D004911 6.8e-17 91.3 72 59.7
CAN.G616.16 Capsicum annuum HOM05D003534 ORTHO05D004911 2.6e-16 89.4 84 58.3
CANSAT21G0339 Cannabis sativa HOM05D003534 ORTHO05D004911 1.4e-14 83.6 74 63.5
SMO361G0680 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 4.1e-14 82.0 59 62.7
PSO478G1590 Papaver somniferum HOM05D000040 ORTHO05D000267 5.9e-13 78.2 65 52.3
HanXRQChr16g0507701 Helianthus annuus HOM05D003534 ORTHO05D004911 2.9e-12 75.9 53 64.2
PSO478G3774 Papaver somniferum HOM05D003534 ORTHO05D004911 2.9e-12 75.9 65 50.8
Cre12.g529500 Chlamydomonas reinhardtii HOM05D003534 ORTHO05D004911 1.6e-10 70.1 100 34.0
PRCOL_00001513 Prasinoderma coloniale HOM05D003534 ORTHO05D004911 1.2e-08 63.9 142 32.4
AUR62041501 Chenopodium quinoa HOM05D003534 ORTHO05D004911 9.8e-08 60.8 55 52.7
Cfa023799 Carpinus fangiana HOM05D003534 ORTHO05D004911 2.2e-07 59.7 118 32.2


User provided reference genes

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