Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 1.8e-23 111.7 56 100.0
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.7e-13 78.6 53 73.6
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 1.2e-11 72.4 45 80.0
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 1.6e-11 72.0 45 80.0
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 3.6e-11 70.9 45 80.0
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 3.6e-11 70.9 45 82.2
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 4.7e-11 70.5 45 80.0
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 4.7e-11 70.5 45 80.0
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 4.7e-11 70.5 45 77.8
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 6.2e-11 70.1 45 80.0
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 6.2e-11 70.1 45 80.0
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 8.0e-11 69.7 45 77.8
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 1.1e-10 69.3 45 77.8
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.1e-10 69.3 45 77.8
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 1.1e-10 69.3 45 73.3
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 1.1e-10 69.3 45 77.8
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 1.4e-10 68.9 45 77.8
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 1.4e-10 68.9 45 71.1
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 1.4e-10 68.9 45 75.6
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 1.8e-10 68.6 45 75.6
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 1.8e-10 68.6 45 71.1
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 1.8e-10 68.6 45 77.8
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 1.8e-10 68.6 45 77.8
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 2.3e-10 68.2 45 75.6
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 2.3e-10 68.2 45 73.3
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 2.3e-10 68.2 45 75.6
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 75.6
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 75.6
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 75.6
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 75.6
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 77.8
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 77.8
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 75.6
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 75.6
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 3.1e-10 67.8 45 75.6
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 4.0e-10 67.4 45 71.1
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 4.0e-10 67.4 45 75.6
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 4.0e-10 67.4 45 75.6
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 4.0e-10 67.4 45 75.6
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 5.2e-10 67.0 45 75.6
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 6.8e-10 66.6 45 71.1
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 6.8e-10 66.6 45 73.3
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 6.8e-10 66.6 45 71.1
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 6.8e-10 66.6 45 73.3
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 6.8e-10 66.6 45 73.3
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 8.9e-10 66.2 45 73.3
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 8.9e-10 66.2 45 73.3
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 8.9e-10 66.2 45 73.3
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 8.9e-10 66.2 45 71.1
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 1.2e-09 65.9 45 73.3
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.2e-09 65.9 45 73.3
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 1.2e-09 65.9 45 71.1
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 1.2e-09 65.9 45 75.6
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 1.2e-09 65.9 45 73.3
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 1.2e-09 65.9 45 73.3
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 1.2e-09 65.9 45 71.1
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.2e-09 65.9 45 71.1
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 1.5e-09 65.5 45 68.9
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 1.5e-09 65.5 45 68.9
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 1.5e-09 65.5 45 68.9
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 1.5e-09 65.5 45 68.9
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 1.5e-09 65.5 45 68.9
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 1.5e-09 65.5 45 68.9
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 1.5e-09 65.5 45 73.3
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 1.5e-09 65.5 45 71.1
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 2.6e-09 64.7 46 76.1
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 3.4e-09 64.3 45 68.9
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 3.4e-09 64.3 45 71.1
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 4.4e-09 63.9 45 68.9
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 4.4e-09 63.9 45 71.1
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 7.5e-09 63.2 46 73.9
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 9.8e-09 62.8 45 68.9
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 9.8e-09 62.8 45 68.9
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 1.3e-08 62.4 45 68.9
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.3e-08 62.4 45 68.9
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 2.2e-08 61.6 45 68.9
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 2.2e-08 61.6 46 71.7
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 2.2e-08 61.6 45 64.4
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 2.9e-08 61.2 45 62.2
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 3.7e-08 60.8 45 62.2
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 4.9e-08 60.5 46 69.6
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 8.3e-08 59.7 47 68.1
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 8.3e-08 59.7 45 66.7
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 1.1e-07 59.3 46 67.4
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.9e-07 58.5 57 56.1
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 1.9e-07 58.5 45 66.7
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 3.2e-07 57.8 45 62.2
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 5.4e-07 57.0 45 64.4
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 5.4e-07 57.0 45 64.4
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 5.4e-07 57.0 45 64.4
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 5.4e-07 57.0 45 64.4
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 5.4e-07 57.0 45 64.4
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 5.4e-07 57.0 45 66.7
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 7.0e-07 56.6 45 64.4
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 1.6e-06 55.5 45 60.0
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.6e-06 55.5 45 60.0
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.6e-06 55.5 46 65.2
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 2.7e-06 54.7 46 58.7
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 3.5e-06 54.3 46 63.0
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 3.5e-06 54.3 45 55.6
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 4.6e-06 53.9 45 57.8
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 7.8e-06 53.1 45 60.0
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 7.8e-06 53.1 30 86.7


User provided reference genes

Program Settings