Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 0.0e+00 1225.7 607 100.0
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 3.0e-292 1008.1 607 85.5
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 1.9e-267 925.6 605 78.0
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 1.2e-261 906.4 590 77.1
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 7.8e-261 903.7 603 75.3
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 1.3e-260 902.9 598 77.1
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 2.3e-260 902.1 604 75.8
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 3.0e-260 901.7 604 75.8
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 8.7e-260 900.2 605 75.4
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 1.9e-259 899.0 605 75.0
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 5.6e-259 897.5 600 75.8
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 2.8e-258 895.2 605 75.7
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 2.8e-258 895.2 605 75.2
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 1.1e-257 893.3 598 75.3
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 2.4e-257 892.1 600 75.7
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 9.0e-257 890.2 605 74.9
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 1.2e-256 889.8 598 75.1
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 4.5e-256 887.9 590 75.8
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 9.9e-256 886.7 614 74.1
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 1.3e-255 886.3 599 75.1
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 2.2e-255 885.6 605 73.9
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 3.8e-255 884.8 604 74.5
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 1.4e-254 882.9 606 74.4
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 5.4e-254 880.9 621 72.5
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 5.4e-254 880.9 605 73.7
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 2.1e-253 879.0 605 73.9
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 3.5e-253 878.2 605 74.2
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 6.0e-253 877.5 606 72.8
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 1.0e-252 876.7 603 72.8
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 1.8e-252 875.9 603 74.1
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 2.3e-252 875.5 600 74.0
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 5.1e-252 874.4 606 73.8
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 6.7e-252 874.0 621 72.0
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 8.7e-252 873.6 607 73.5
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 1.1e-251 873.2 583 76.0
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 1.5e-251 872.8 609 73.6
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 1.9e-251 872.5 603 74.1
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 2.5e-251 872.1 632 71.2
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 3.3e-251 871.7 621 72.0
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 5.6e-251 870.9 600 73.8
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 7.4e-251 870.5 586 75.4
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 1.6e-250 869.4 603 73.6
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 1.6e-250 869.4 609 73.2
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 1.6e-250 869.4 606 72.9
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 1.6e-250 869.4 604 73.5
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 1.6e-250 869.4 605 73.7
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 4.8e-250 867.8 626 72.0
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 4.8e-250 867.8 606 72.8
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 6.2e-250 867.5 594 73.6
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 6.2e-250 867.5 601 74.4
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 8.1e-250 867.1 605 72.9
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 1.4e-249 866.3 605 72.9
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 1.4e-249 866.3 586 75.3
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 5.3e-249 864.4 580 75.2
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 6.9e-249 864.0 604 72.0
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 1.5e-248 862.8 594 73.2
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 2.0e-248 862.4 603 73.1
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 2.0e-248 862.4 597 73.4
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 2.6e-248 862.1 592 73.5
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 2.6e-248 862.1 605 72.2
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 3.4e-248 861.7 577 75.7
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 2.2e-247 859.0 597 72.7
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 3.8e-247 858.2 597 72.5
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 6.4e-247 857.4 597 72.7
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 8.4e-247 857.1 599 72.0
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.9e-246 855.9 586 75.1
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 3.2e-246 855.1 605 72.6
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 4.2e-246 854.7 646 68.6
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 4.2e-246 854.7 646 68.6
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 7.1e-246 854.0 605 72.7
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 7.1e-246 854.0 605 72.7
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 1.6e-245 852.8 605 72.2
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 2.7e-245 852.0 574 75.1
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 4.6e-245 851.3 597 72.2
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 3.9e-244 848.2 646 70.1
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 1.5e-243 846.3 615 70.7
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 6.2e-242 840.9 603 70.8
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 6.2e-242 840.9 589 72.5
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 5.3e-241 837.8 591 71.7
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 6.9e-241 837.4 587 73.4
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 2.2e-239 832.4 593 71.2
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 6.5e-239 830.9 597 69.7
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 1.9e-238 829.3 606 69.5
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 3.2e-238 828.6 592 70.8
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 5.1e-236 821.2 604 70.9
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 5.5e-230 801.2 603 68.3
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 2.5e-222 775.8 605 66.8
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 2.1e-221 772.7 603 67.3
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 1.0e-215 753.8 648 63.3
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 2.9e-215 752.3 577 66.4
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 3.3e-211 738.8 574 65.2
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 5.7e-211 738.0 541 70.6
vmacro23145 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 1.7e-210 736.5 564 68.1
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 3.8e-207 725.3 575 64.5
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 1.2e-195 687.2 555 63.2
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 1.2e-187 660.6 411 80.8
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 9.8e-187 657.5 412 79.9
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 6.3e-186 654.8 576 59.9
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 1.6e-184 650.2 411 78.6
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 9.5e-182 641.0 605 56.4
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 5.2e-180 635.2 432 75.2
Zm00001eb140420 Zea mays HOM05D005018 ORTHO05D006786 2.8e-173 612.8 467 67.0
PGSC0003DMG400006748 Solanum tuberosum HOM05D005018 ORTHO05D006786 1.4e-169 600.5 411 74.2
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 1.2e-168 597.4 588 56.1
Ciclev10003172m.g Citrus clementina HOM05D005018 ORTHO05D006786 2.6e-163 579.7 355 80.8
AUR62000506 Chenopodium quinoa HOM05D005018 ORTHO05D006786 3.5e-160 569.3 458 64.4
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 5.1e-159 565.5 355 79.2
Eucgr.I00140 Eucalyptus grandis HOM05D005018 ORTHO05D006786 7.1e-129 465.3 520 52.1
AagrBONN_evm.TU.Sc2ySwM_344.2451 Anthoceros agrestis HOM05D005018 ORTHO05D006786 1.3e-122 444.5 313 71.6
MD07G1060500 Malus domestica HOM05D005018 ORTHO05D006786 7.9e-120 435.3 314 72.3
BolC8t48115H Brassica oleracea HOM05D005018 ORTHO05D006786 1.3e-106 391.3 429 52.2
Haze_25310 Corylus avellana HOM05D005018 ORTHO05D006786 3.9e-103 379.8 430 52.6
BcaC07g37734 Brassica carinata HOM05D005018 ORTHO05D006786 8.8e-95 352.1 360 54.2
Ciclev10002140m.g Citrus clementina HOM05D005018 ORTHO05D006786 2.6e-91 340.5 253 70.0
Cfa023424 Carpinus fangiana HOM05D005018 ORTHO05D006786 9.8e-86 322.0 597 34.3
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 1.3e-85 321.6 538 35.7
Cpa.g.sc42.187 Carica papaya HOM05D005018 ORTHO05D006786 2.2e-82 310.8 175 84.0
Cpa.g.sc1441.1 Carica papaya HOM05D005018 ORTHO05D006786 1.7e-77 294.7 178 83.1
MCO09G386 Micromonas commoda HOM05D005018 ORTHO05D006786 5.0e-74 283.1 591 34.9
Haze_25309 Corylus avellana HOM05D005018 ORTHO05D006786 2.8e-72 277.3 175 75.4
Haze_26659 Corylus avellana HOM05D005018 ORTHO05D006786 2.9e-66 257.3 405 39.3
SEGI_06865 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 3.6e-56 223.8 176 61.9
SEGI_07875 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 5.8e-54 216.5 239 47.3
Haze_25306 Corylus avellana HOM05D005018 ORTHO05D000965 2.3e-42 177.9 103 86.4
Lsat_1_v5_gn_8_7740 Lactuca sativa HOM05D005018 ORTHO05D006786 2.4e-31 141.4 72 84.7
Zm00001eb292630 Zea mays HOM05D005018 ORTHO05D006786 3.1e-31 141.0 138 53.6
Haze_18314 Corylus avellana HOM05D005018 ORTHO05D006786 9.9e-30 136.0 139 54.0
Cpa.g.sc1441.2 Carica papaya HOM05D005018 ORTHO05D006786 2.2e-29 134.8 95 72.6
Zm00001eb074000 Zea mays HOM05D005018 ORTHO05D006786 3.8e-29 134.0 121 57.0
Ah.06g190940 Amaranthus hybridus HOM05D005018 ORTHO05D006786 1.3e-26 125.6 94 66.0
CDE08G0903 Ceratophyllum demersum HOM05D005018 ORTHO05D006786 3.9e-26 124.0 88 70.5
SMO139G0025 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 1.6e-19 102.1 110 52.7
Haze_18329 Corylus avellana HOM05D001982 ORTHO05D008035 1.0e-18 99.4 73 64.4
SMO157G0012 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 1.3e-18 99.0 64 73.4
HanXRQChr09g0246051 Helianthus annuus HOM05D005018 ORTHO05D006171 2.1e-16 91.7 60 61.7
HanXRQChr10g0278491 Helianthus annuus HOM05D005018 ORTHO05D006786 1.2e-14 85.9 47 76.6
C09p47090 Brassica napus HOM05D036241 ORTHO05D032846 2.5e-12 78.2 91 46.2
Cpa.g.c37459 Carica papaya HOM05D005018 ORTHO05D043556 1.0e-05 56.2 27 92.6
SEGI_19526 Sequoiadendron giganteum HOM05D005018 ORTHO05D043556 1.0e-05 56.2 33 72.7


User provided reference genes

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