Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 0.0e+00 1127.9 644 100.0
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 6.8e-255 884.0 633 84.5
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 5.5e-196 688.3 633 67.5
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 8.8e-186 654.4 632 65.5
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 6.3e-176 621.7 631 62.0
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 6.5e-173 611.7 631 57.7
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 3.6e-171 605.9 631 58.3
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 1.3e-168 597.4 633 58.8
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 2.8e-168 596.3 633 59.2
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 4.1e-167 592.4 633 61.3
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 3.8e-165 585.9 635 61.3
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 1.2e-163 580.9 636 60.5
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 2.8e-163 579.7 633 61.3
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 8.9e-162 574.7 633 60.3
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 1.2e-161 574.3 630 63.0
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 1.2e-161 574.3 517 65.8
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 6.3e-160 568.5 638 56.0
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.4e-159 566.6 636 59.7
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 1.9e-156 557.0 636 60.1
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 4.9e-152 542.3 634 57.9
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 1.9e-151 540.4 633 51.8
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 1.6e-150 537.3 631 57.7
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 1.1e-148 531.2 635 50.9
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 7.3e-148 528.5 635 57.5
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 8.9e-146 521.5 637 59.0
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 1.7e-144 517.3 635 54.6
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 4.9e-144 515.8 640 58.4
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 6.4e-144 515.4 635 58.6
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 8.3e-144 515.0 635 58.6
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 8.3e-144 515.0 638 57.8
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.1e-143 514.6 634 57.9
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 3.2e-143 513.1 636 53.9
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.1e-142 510.4 634 57.9
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 6.0e-142 508.8 635 54.6
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 1.7e-141 507.3 632 55.2
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 2.3e-141 506.9 635 54.2
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 3.0e-141 506.5 634 53.3
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 3.3e-140 503.1 700 42.4
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 5.6e-140 502.3 633 55.5
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 9.5e-140 501.5 634 56.9
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 2.8e-139 500.0 635 54.2
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 3.6e-139 499.6 634 56.8
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 1.1e-138 498.0 632 48.3
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 4.0e-138 496.1 635 56.7
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 5.2e-138 495.7 639 56.8
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 2.0e-137 493.8 632 48.9
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 5.8e-137 492.3 636 48.1
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 1.3e-136 491.1 634 54.1
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 2.9e-136 490.0 637 57.0
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 3.2e-135 486.5 636 55.7
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 1.6e-134 484.2 636 54.4
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 1.6e-134 484.2 637 54.9
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 4.6e-134 482.6 634 56.9
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 7.8e-134 481.9 637 56.0
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 1.3e-133 481.1 636 55.8
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 2.5e-132 476.9 601 56.9
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 1.2e-131 474.6 638 54.4
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 8.1e-131 471.9 686 45.2
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 1.4e-130 471.1 634 54.3
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 3.1e-130 469.9 646 50.2
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 4.0e-130 469.5 634 52.2
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 8.9e-130 468.4 629 53.3
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 9.9e-129 464.9 650 51.2
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 9.9e-129 464.9 655 49.9
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 3.2e-127 459.9 634 54.1
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 7.1e-127 458.8 658 48.9
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 1.2e-126 458.0 635 52.9
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 1.2e-126 458.0 634 53.9
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 7.8e-126 455.3 646 52.9
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 3.9e-125 453.0 631 49.0
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 6.6e-125 452.2 637 54.3
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 8.7e-125 451.8 667 51.3
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 1.1e-124 451.4 635 52.3
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 5.6e-124 449.1 636 51.1
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 8.1e-123 445.3 639 54.9
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 2.4e-122 443.7 681 46.7
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 7.6e-121 438.7 638 52.4
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 1.7e-120 437.6 637 54.0
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 3.8e-120 436.4 569 52.0
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 4.9e-120 436.0 661 49.8
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 3.2e-119 433.3 637 52.7
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 4.2e-119 433.0 637 55.4
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 7.1e-119 432.2 641 51.6
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 7.1e-119 432.2 638 54.1
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 1.6e-118 431.0 638 53.0
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 1.6e-118 431.0 638 52.2
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 2.7e-118 430.3 641 51.5
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 6.0e-118 429.1 640 52.5
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 6.0e-118 429.1 643 49.3
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 3.0e-117 426.8 636 50.9
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 5.1e-117 426.0 631 54.7
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 8.7e-117 425.2 636 52.4
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 9.6e-116 421.8 638 52.4
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.1e-115 420.6 517 54.0
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 4.8e-115 419.5 635 52.9
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 8.1e-115 418.7 636 51.3
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 2.4e-114 417.2 638 51.7
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 5.8e-113 412.5 642 50.5
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 5.4e-111 406.0 581 41.8
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 1.3e-109 401.4 581 50.3
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 3.9e-109 399.8 636 42.3
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 1.1e-108 398.3 638 45.5
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 6.2e-107 392.5 473 59.0
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 6.2e-107 392.5 634 52.5
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 8.4e-104 382.1 638 41.8
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 1.3e-101 374.8 638 49.1
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.8e-101 374.4 451 50.8
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 6.7e-101 372.5 640 45.3
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 4.0e-98 363.2 635 40.9
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 1.4e-95 354.8 637 48.2
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 1.4e-95 354.8 520 49.2
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 1.8e-93 347.8 655 41.4
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 3.7e-91 340.1 633 38.2
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 3.4e-89 333.6 463 40.4
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 1.7e-88 331.3 660 37.3
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 6.1e-86 322.8 636 37.9
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 5.5e-79 299.7 450 52.4
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 6.5e-72 276.2 463 41.5
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.2e-71 272.7 491 35.8
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 1.5e-68 265.0 457 42.9
Glyma.02G123302 Glycine max HOM05D003682 ORTHO05D004224 1.1e-66 258.8 350 42.3
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.4e-66 257.7 478 36.6
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 5.9e-65 253.1 653 41.7
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 6.5e-64 249.6 456 35.7
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 5.4e-58 229.9 275 60.4
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 8.5e-56 222.6 242 61.2
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 1.5e-55 221.9 253 69.2
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.5e-47 195.3 353 36.8
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 3.9e-40 170.6 187 48.7
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 7.3e-39 166.4 573 26.9
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 9.5e-39 166.0 638 29.9
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 1.6e-38 165.2 211 55.9
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 1.8e-37 161.8 185 64.3
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 8.9e-37 159.5 126 61.9
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 8.6e-32 142.9 214 49.5
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 3.3e-31 141.0 125 55.2
unitig_0.g156 Utricularia gibba HOM05D003682 ORTHO05D004224 4.3e-31 140.6 109 62.4
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 3.6e-30 137.5 127 54.3
Actinidia36899 Actinidia chinensis HOM05D003682 ORTHO05D004224 1.4e-29 135.6 135 65.9
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 5.8e-28 130.2 129 55.8
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 7.5e-28 129.8 127 53.5
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 3.2e-26 124.4 352 29.3
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 1.3e-24 119.0 135 51.1
CSS0023594 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.1e-23 115.9 98 59.2
SMO307G0051 Selaginella moellendorffii HOM05D003682 ORTHO05D004224 1.8e-21 108.6 126 45.2
SalBow4G1793 Salvia bowleyana HOM05D003682 ORTHO05D004224 3.1e-21 107.8 119 66.4
Psat5g049320 Pisum sativum HOM05D003682 ORTHO05D004224 6.8e-21 106.7 163 43.6
BcaB06g27567 Brassica carinata HOM05D003682 ORTHO05D004224 1.7e-19 102.1 113 48.7
CSS0005132 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.4e-19 100.1 97 54.6
EL10Ac3g05976 Beta vulgaris HOM05D003682 ORTHO05D004224 2.3e-16 91.7 72 56.9
HanXRQChr08g0233481 Helianthus annuus HOM05D003682 ORTHO05D004224 6.6e-16 90.1 91 78.0
CSS0029499 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.1e-13 81.3 58 62.1
CSS0045772 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.2e-13 80.5 63 55.6
Lsat_1_v5_gn_3_58200 Lactuca sativa HOM05D003682 ORTHO05D004224 3.4e-12 77.8 76 55.3
CSS0029631 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.8e-12 77.0 58 58.6
CSS0037736 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.6e-12 76.6 58 60.3
CSS0020196 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 9.9e-12 76.3 58 58.6
CSS0037747 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 9.9e-12 76.3 58 58.6
MCO12G062 Micromonas commoda HOM05D003682 ORTHO05D004224 2.7e-09 68.2 283 26.5
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 1.3e-08 65.9 260 22.7
TAR628G0387 Trochodendron aralioides HOM05D003682 ORTHO05D004224 3.0e-08 64.7 52 57.7
Cre07.g339350 Chlamydomonas reinhardtii HOM05D003682 ORTHO05D004224 5.1e-08 63.9 132 31.8
arahy.Tifrunner.gnm1.ann1.R6K80C Arachis hypogaea HOM05D003682 ORTHO05D004224 1.1e-07 62.8 132 38.6
arahy.Tifrunner.gnm1.ann1.H7L4UV Arachis hypogaea HOM05D003682 ORTHO05D004224 1.9e-07 62.0 90 46.7
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 9.6e-07 59.7 30 83.3
Lalb_Chr04g0252781 Lupinus albus HOM05D003682 ORTHO05D004224 2.1e-06 58.5 69 44.9
PGR102G2117 Punica granatum HOM05D003682 ORTHO05D004224 3.6e-06 57.8 69 46.4


User provided reference genes

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