Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 3.8e-237 824.7 492 100.0
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 3.8e-165 585.5 385 91.2
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 3.4e-105 386.3 512 52.7
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.1e-98 364.8 507 51.3
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.1e-95 354.8 506 50.6
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.9e-95 354.0 539 50.3
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 2.8e-91 340.1 529 47.3
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 8.2e-91 338.6 510 50.0
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 1.1e-90 338.2 530 46.2
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 3.8e-88 329.7 527 48.0
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 6.5e-88 328.9 513 48.7
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.4e-87 327.8 500 48.8
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 9.3e-87 325.1 533 47.1
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 2.1e-86 323.9 559 45.8
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 4.6e-86 322.8 555 44.5
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.4e-82 311.2 545 44.6
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.2e-81 308.1 557 45.6
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 4.5e-81 306.2 508 45.9
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 1.0e-80 305.1 510 46.9
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 1.0e-80 305.1 524 45.0
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 2.2e-80 303.9 518 47.5
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 2.2e-80 303.9 515 46.2
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 1.1e-79 301.6 528 46.0
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 5.5e-79 299.3 521 45.9
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 1.0e-77 295.0 501 46.3
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 5.1e-77 292.7 526 44.1
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 6.7e-77 292.4 519 47.6
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 2.0e-76 290.8 510 43.9
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 2.5e-76 290.4 520 49.0
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 3.3e-76 290.0 507 46.0
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 5.7e-76 289.3 524 45.2
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 7.4e-76 288.9 513 46.0
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 6.3e-75 285.8 513 46.0
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.4e-74 284.6 506 46.2
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.4e-74 284.6 501 45.3
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.3e-74 282.7 503 45.3
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.2e-73 281.6 531 44.1
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 4.5e-73 279.6 515 45.6
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 4.5e-73 279.6 535 43.2
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 6.5e-72 275.8 506 44.9
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 6.5e-72 275.8 503 44.7
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 6.5e-72 275.8 544 46.0
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 1.4e-71 274.6 553 45.6
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 2.5e-71 273.9 523 42.8
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 3.2e-71 273.5 537 43.6
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 4.2e-71 273.1 564 42.7
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.6e-70 271.2 530 42.3
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.1e-70 270.8 504 43.8
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 2.1e-70 270.8 529 45.4
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 2.1e-70 270.8 560 41.1
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 2.7e-70 270.4 503 45.1
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.7e-70 270.4 504 43.3
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 2.7e-70 270.4 542 46.3
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 3.6e-70 270.0 503 45.1
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.7e-70 269.6 503 44.5
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.7e-70 269.6 507 44.2
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 1.8e-69 267.7 500 43.8
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 3.0e-69 266.9 514 45.9
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 3.0e-69 266.9 503 42.5
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 3.0e-69 266.9 521 43.2
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 3.9e-69 266.5 519 43.0
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.9e-69 266.5 517 46.4
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 5.1e-69 266.2 504 43.8
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 3.3e-68 263.5 520 41.7
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 5.7e-68 262.7 498 46.4
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 9.7e-68 261.9 510 41.6
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 1.7e-67 261.2 511 44.4
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 2.2e-67 260.8 509 44.0
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 2.2e-67 260.8 505 42.4
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.7e-67 260.0 556 41.9
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 4.8e-67 259.6 499 42.5
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 1.2e-65 255.0 501 43.3
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 3.5e-65 253.4 537 40.8
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 5.9e-65 252.7 507 41.4
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.3e-64 251.5 527 42.1
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 1.7e-64 251.1 550 40.4
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 2.2e-64 250.8 526 42.8
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.9e-64 250.4 506 41.3
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 3.8e-64 250.0 551 40.1
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 3.8e-64 250.0 514 42.0
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 5.0e-64 249.6 501 43.5
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 1.5e-63 248.1 501 41.1
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.5e-63 248.1 507 42.0
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.9e-63 247.7 502 41.8
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 3.2e-63 246.9 560 39.6
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 4.2e-63 246.5 511 42.3
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 4.2e-63 246.5 539 41.6
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 1.2e-62 245.0 507 41.6
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 2.7e-62 243.8 553 39.4
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 2.7e-62 243.8 505 40.0
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 4.7e-62 243.0 514 39.7
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 1.0e-61 241.9 573 39.3
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 3.9e-61 240.0 495 41.8
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.9e-61 240.0 561 40.6
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.9e-61 240.0 509 45.4
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 6.7e-61 239.2 216 70.4
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.1e-60 238.4 529 41.8
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 2.0e-60 237.7 516 40.7
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.0e-60 237.7 551 40.1
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.6e-60 237.3 551 40.1
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 4.4e-60 236.5 505 41.8
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 2.2e-59 234.2 500 42.2
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 2.2e-59 234.2 546 39.4
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 3.7e-59 233.4 540 41.7
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 4.8e-59 233.0 493 41.8
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 3.1e-58 230.3 551 42.8
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 5.3e-58 229.6 541 41.8
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 1.6e-57 228.0 508 43.3
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.5e-57 226.9 508 40.6
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 6.5e-56 222.6 513 39.6
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 2.1e-54 217.6 651 33.8
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 3.6e-54 216.9 510 39.4
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 1.0e-53 215.3 564 36.0
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 6.8e-53 212.6 675 33.6
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 2.0e-52 211.1 490 42.2
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 7.5e-52 209.1 521 38.6
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.2e-49 201.8 483 39.1
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.6e-49 201.4 490 40.6
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 5.9e-49 199.5 529 39.5
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 1.7e-48 198.0 575 35.3
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 2.5e-47 194.1 491 39.7
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 4.2e-47 193.4 502 36.3
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 5.5e-47 193.0 546 35.9
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 3.5e-41 173.7 512 35.5
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 8.9e-37 159.1 500 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 2.6e-36 157.5 145 65.5
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 1.2e-30 138.7 179 55.9
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 8.0e-30 136.0 91 85.7
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 1.0e-29 135.6 500 30.0
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 7.5e-28 129.4 442 32.6
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 2.2e-27 127.9 521 32.1
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 3.7e-27 127.1 100 68.0
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.1e-26 123.6 89 76.4
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 6.0e-25 119.8 199 46.7
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 5.0e-24 116.7 401 33.9
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 6.6e-24 116.3 100 68.0
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 6.6e-24 116.3 459 30.9
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 9.5e-23 112.5 123 59.3
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 5.2e-21 106.7 151 51.7
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 6.0e-17 93.2 166 47.6
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 1.1e-15 89.0 140 42.9
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 2.1e-14 84.7 57 84.2
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 8.1e-14 82.8 60 76.7
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 6.8e-13 79.7 160 38.8
Dinv43032 Davidia involucrata HOM05D038150 ORTHO05D000476 2.3e-08 64.7 128 38.3
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 1.5e-07 62.0 42 76.2
Dinv23957 Davidia involucrata HOM05D038150 ORTHO05D000476 2.5e-07 61.2 112 37.5
unitig_52.g17084 Utricularia gibba HOM05D003521 ORTHO05D000476 2.5e-07 61.2 46 67.4
EL10Ac6g13433 Beta vulgaris HOM05D000200 ORTHO05D000262 4.7e-06 57.0 56 53.6


User provided reference genes

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