Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023127.1 Olea europaea HOM05D003395 ORTHO05D004087 4.6e-194 681.0 338 100.0
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 3.8e-71 272.7 224 67.9
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 2.9e-63 246.5 222 62.2
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 4.9e-63 245.7 222 62.2
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 8.4e-63 245.0 222 61.3
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 1.4e-62 244.2 226 61.1
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 2.5e-62 243.4 227 59.9
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 2.5e-62 243.4 222 59.9
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 4.2e-62 242.7 222 60.4
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 4.2e-62 242.7 222 60.8
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 4.2e-62 242.7 227 59.9
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 5.5e-62 242.3 223 61.0
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 5.5e-62 242.3 222 60.8
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 9.3e-62 241.5 227 59.9
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 9.3e-62 241.5 224 60.7
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 1.2e-61 241.1 222 60.4
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 2.1e-61 240.4 224 60.7
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 3.5e-61 239.6 222 59.5
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 3.5e-61 239.6 222 59.5
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 4.6e-61 239.2 222 60.4
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 4.6e-61 239.2 222 60.4
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 6.0e-61 238.8 224 59.8
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 1.0e-60 238.0 221 59.7
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 1.8e-60 237.3 221 59.7
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 1.8e-60 237.3 221 57.9
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 1.8e-60 237.3 221 59.7
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 3.0e-60 236.5 228 59.6
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 3.9e-60 236.1 222 59.5
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 3.9e-60 236.1 224 59.4
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 3.9e-60 236.1 222 59.5
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 5.1e-60 235.7 222 59.0
Prupe.7G054800 Prunus persica HOM05D003395 ORTHO05D004087 6.7e-60 235.3 222 58.1
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 8.7e-60 235.0 222 59.5
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 1.1e-59 234.6 222 58.6
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 1.1e-59 234.6 222 58.6
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 1.1e-59 234.6 222 59.0
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 1.1e-59 234.6 221 58.8
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 1.5e-59 234.2 220 59.5
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 1.5e-59 234.2 222 58.6
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 1.5e-59 234.2 222 59.9
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 1.9e-59 233.8 222 58.6
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 1.9e-59 233.8 222 58.1
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 1.9e-59 233.8 221 58.4
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 1.9e-59 233.8 221 58.4
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 2.5e-59 233.4 226 58.0
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 2.5e-59 233.4 222 59.9
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 3.3e-59 233.0 226 58.8
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 5.7e-59 232.3 221 57.9
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 5.7e-59 232.3 222 57.7
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 7.4e-59 231.9 220 59.1
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 9.7e-59 231.5 222 55.9
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 1.6e-58 230.7 224 58.0
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 1.6e-58 230.7 222 58.6
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 2.1e-58 230.3 222 59.0
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 2.8e-58 229.9 222 58.6
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 2.8e-58 229.9 222 56.8
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 3.7e-58 229.6 222 57.7
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 4.8e-58 229.2 222 59.0
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 4.8e-58 229.2 226 57.1
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 4.8e-58 229.2 221 58.4
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 8.2e-58 228.4 221 57.9
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 8.2e-58 228.4 223 57.0
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 1.1e-57 228.0 226 57.1
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 1.1e-57 228.0 222 55.9
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.4e-57 227.6 222 56.3
SGA_v2.0_scaffold94G28494 Striga asiatica HOM05D003395 ORTHO05D004087 2.4e-57 226.9 228 56.6
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 3.1e-57 226.5 221 57.0
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 3.1e-57 226.5 220 59.1
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 6.9e-57 225.3 223 54.3
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 9.0e-57 224.9 222 55.9
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 3.4e-56 223.0 220 56.4
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 4.5e-56 222.6 220 55.5
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 5.9e-56 222.2 222 56.3
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 7.6e-56 221.9 220 55.0
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.6e-56 221.9 222 56.3
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 1.0e-55 221.5 220 55.9
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 1.3e-55 221.1 220 55.0
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 1.7e-55 220.7 222 55.4
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 1.7e-55 220.7 221 56.6
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 1.7e-55 220.7 223 55.2
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 2.2e-55 220.3 220 55.9
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 2.9e-55 219.9 221 54.8
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 3.8e-55 219.5 220 55.5
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 6.5e-55 218.8 222 55.9
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 6.5e-55 218.8 222 55.9
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 6.5e-55 218.8 221 55.7
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 6.5e-55 218.8 221 55.7
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 6.5e-55 218.8 225 55.6
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 8.5e-55 218.4 223 52.9
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 1.1e-54 218.0 221 54.3
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 1.1e-54 218.0 221 54.3
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.4e-54 217.6 222 53.6
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 1.9e-54 217.2 222 55.4
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 4.2e-54 216.1 222 53.2
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 4.2e-54 216.1 221 53.8
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 4.2e-54 216.1 221 53.8
CDE11G0192 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 4.2e-54 216.1 223 53.8
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 5.5e-54 215.7 223 55.2
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 9.3e-54 214.9 222 55.0
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 9.3e-54 214.9 222 53.6
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 9.3e-54 214.9 222 53.6
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 9.3e-54 214.9 222 55.4
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 1.6e-53 214.2 225 51.1
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 1.6e-53 214.2 228 53.5
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 2.1e-53 213.8 222 54.1
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 2.1e-53 213.8 222 54.1
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 2.1e-53 213.8 222 54.1
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 3.6e-53 213.0 222 54.1
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 3.6e-53 213.0 199 58.3
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 3.6e-53 213.0 225 55.1
Zm00001eb016760 Zea mays HOM05D003395 ORTHO05D004087 3.6e-53 213.0 221 52.5
CARHR167540 Cardamine hirsuta HOM05D003395 ORTHO05D004087 4.6e-53 212.6 210 55.7
Gohir.A11G309900 Gossypium hirsutum HOM05D003395 ORTHO05D004087 4.6e-53 212.6 218 55.0
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 6.1e-53 212.2 223 52.9
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.0e-52 211.5 210 56.2
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 2.3e-52 210.3 222 53.6
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 2.5e-51 206.8 219 50.7
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 5.7e-51 205.7 214 54.2
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 2.2e-50 203.8 226 51.8
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 6.3e-50 202.2 226 51.8
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 1.2e-48 198.0 207 55.6
RcHm_v2.0_Chr2g0152371 Rosa chinensis HOM05D003395 ORTHO05D004087 5.0e-47 192.6 224 48.7
Eucgr.K01999 Eucalyptus grandis HOM05D003395 ORTHO05D004087 2.5e-46 190.3 205 52.7
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 3.6e-45 186.4 227 47.6
AagrBONN_evm.TU.Sc2ySwM_117.1001 Anthoceros agrestis HOM05D003395 ORTHO05D004087 5.7e-43 179.1 224 46.4
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 1.3e-42 177.9 219 48.4
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 1.4e-38 164.5 187 49.7
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 2.1e-37 160.6 223 42.6
Actinidia17665 Actinidia chinensis HOM05D003395 ORTHO05D004087 1.2e-32 144.8 168 50.6
CBR_g4043 Chara braunii HOM05D003395 ORTHO05D004087 1.3e-26 124.8 260 34.6
FvH4_6g38800 Fragaria vesca HOM05D003395 ORTHO05D004087 1.2e-24 118.2 228 38.2
PGSC0003DMG402030272 Solanum tuberosum HOM05D003395 ORTHO05D004087 2.0e-24 117.5 131 53.4
SHI32633 Sapria himalayana HOM05D003395 ORTHO05D004087 1.5e-22 111.3 96 63.5
SHI37552 Sapria himalayana HOM05D003395 ORTHO05D004087 5.7e-19 99.4 143 44.8
Lj3g0025487 Lotus japonicus HOM05D003395 ORTHO05D004087 1.3e-18 98.2 76 69.7
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.3e-15 88.2 71 63.4
SHI17502 Sapria himalayana HOM05D003395 ORTHO05D004087 6.1e-13 79.3 79 54.4
SHI33206 Sapria himalayana HOM05D003395 ORTHO05D004087 2.0e-11 74.3 63 55.6
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 1.7e-10 71.2 73 46.6
Cre17.g717800 Chlamydomonas reinhardtii HOM05D003395 ORTHO05D004087 1.4e-09 68.2 113 32.7
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 9.2e-09 65.5 59 52.5
SHI32634 Sapria himalayana HOM05D003395 ORTHO05D004087 2.0e-08 64.3 67 49.3
CARHR254100 Cardamine hirsuta HOM05D003395 ORTHO05D004087 3.3e-06 57.0 53 54.7


User provided reference genes

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