Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022173.1 Olea europaea HOM05D004839 ORTHO05D006012 2.9e-253 878.2 497 100.0
MSTRG.22981 Avicennia marina HOM05D004839 ORTHO05D006012 6.6e-40 169.5 283 39.6
Dinv10521 Davidia involucrata HOM05D004839 ORTHO05D006012 1.2e-38 165.2 283 39.2
Nn4g23407 Nelumbo nucifera HOM05D004839 ORTHO05D006012 2.8e-38 164.1 281 38.4
Atru.chr9.403 Acer truncatum HOM05D004839 ORTHO05D006012 4.7e-38 163.3 283 39.2
Dinv17400 Davidia involucrata HOM05D004839 ORTHO05D006012 8.1e-38 162.5 412 32.5
Actinidia04835 Actinidia chinensis HOM05D004839 ORTHO05D006012 3.1e-37 160.6 283 38.2
MSTRG.11357 Avicennia marina HOM05D004839 ORTHO05D006012 3.1e-37 160.6 283 37.8
SalBow5G5272 Salvia bowleyana HOM05D004839 ORTHO05D006012 3.1e-37 160.6 283 38.2
Cc04_g13220 Coffea canephora HOM05D004839 ORTHO05D006012 5.2e-37 159.8 284 38.7
GSVIVG01007883001 Vitis vinifera HOM05D004839 ORTHO05D006012 5.2e-37 159.8 283 38.5
Actinidia25779 Actinidia chinensis HOM05D004839 ORTHO05D006012 6.9e-37 159.5 284 38.0
CSS0002450 Camellia sinensis var. sinensis HOM05D004839 ORTHO05D006012 6.9e-37 159.5 283 38.2
Ciclev10019267m.g Citrus clementina HOM05D004839 ORTHO05D006012 1.2e-36 158.7 280 39.6
Migut.D01694 Erythranthe guttata HOM05D004839 ORTHO05D006012 3.4e-36 157.1 425 31.3
Eucgr.K02520 Eucalyptus grandis HOM05D004839 ORTHO05D006012 5.8e-36 156.4 355 33.2
CAN.G479.17 Capsicum annuum HOM05D004839 ORTHO05D006012 7.6e-36 156.0 279 36.9
Oeu001010.1 Olea europaea HOM05D004839 ORTHO05D006012 7.6e-36 156.0 354 35.6
Peaxi162Scf00201g10021 Petunia axillaris HOM05D004839 ORTHO05D006012 7.6e-36 156.0 282 37.2
Lj5A104T41 Lonicera japonica HOM05D004839 ORTHO05D006012 1.3e-35 155.2 315 36.5
Nitab4.5_0001410g0060 Nicotiana tabacum HOM05D004839 ORTHO05D006012 1.3e-35 155.2 282 37.2
TWI81G0494 Tripterygium wilfordii HOM05D004839 ORTHO05D006012 2.9e-35 154.1 283 37.8
CiPaw.11G051800 Carya illinoinensis HOM05D004839 ORTHO05D006012 4.9e-35 153.3 262 40.1
Prupe.5G203800 Prunus persica HOM05D004839 ORTHO05D006012 4.9e-35 153.3 283 38.2
Ca_02963_v3 Cicer arietinum L. HOM05D004839 ORTHO05D006012 6.4e-35 152.9 282 37.6
TPR.G11937 Trifolium pratense HOM05D004839 ORTHO05D006012 6.4e-35 152.9 283 37.5
Haze_07703 Corylus avellana HOM05D004839 ORTHO05D006012 8.4e-35 152.5 348 34.5
QL10p019188 Quercus lobata HOM05D004839 ORTHO05D006012 8.4e-35 152.5 284 37.7
MELO3C002019.2 Cucumis melo HOM05D004839 ORTHO05D006012 1.1e-34 152.1 267 38.2
CsaV3_1G005900 Cucumis sativus L. HOM05D000422 ORTHO05D003570 1.1e-34 152.1 267 38.2
Glyma.06G202100 Glycine max HOM05D004839 ORTHO05D006012 1.1e-34 152.1 283 37.1
Psat0s569g0080 Pisum sativum HOM05D004839 ORTHO05D006012 2.4e-34 151.0 282 37.2
MBI16_g41829_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 3.2e-34 150.6 316 35.1
TAR622G0763 Trochodendron aralioides HOM05D004839 ORTHO05D006012 3.2e-34 150.6 283 37.5
VMungo1309G1059 Vigna mungo HOM05D004839 ORTHO05D006012 4.2e-34 150.2 283 36.7
ClCG04G011890 Citrullus lanatus HOM05D004839 ORTHO05D006012 5.4e-34 149.8 268 37.7
Duzib205G0813 Durio zibethinus HOM05D004839 ORTHO05D006012 5.4e-34 149.8 280 37.9
Phvul.009G192800 Phaseolus vulgaris HOM05D004839 ORTHO05D006012 5.4e-34 149.8 300 35.7
Medtr3g024380 Medicago truncatula HOM05D004839 ORTHO05D006012 7.1e-34 149.4 282 36.9
Oeu001821.1 Olea europaea HOM05D004839 ORTHO05D006012 7.1e-34 149.4 209 43.1
PGR044G2204 Punica granatum HOM05D004839 ORTHO05D006012 7.1e-34 149.4 282 35.5
SGA_v2.0_scaffold114G31924 Striga asiatica HOM05D004839 ORTHO05D006012 7.1e-34 149.4 332 33.4
Medtr3g024360 Medicago truncatula HOM05D004839 ORTHO05D006012 9.3e-34 149.1 282 36.9
HanXRQChr05g0157271 Helianthus annuus HOM05D004839 ORTHO05D006012 1.2e-33 148.7 351 33.0
Lalb_Chr13g0296121 Lupinus albus HOM05D004839 ORTHO05D006012 1.2e-33 148.7 281 37.7
AUR62008513 Chenopodium quinoa HOM05D004839 ORTHO05D006012 1.6e-33 148.3 261 37.9
COL.COLO4_37593 Corchorus olitorius HOM05D004839 ORTHO05D006012 1.6e-33 148.3 239 39.3
Glyma.04G163400 Glycine max HOM05D004839 ORTHO05D006012 1.6e-33 148.3 359 33.7
Gohir.D12G184700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 2.1e-33 147.9 406 31.5
Gorai.008G198100 Gossypium raimondii HOM05D004839 ORTHO05D006012 2.1e-33 147.9 406 31.5
PSO478G1197 Papaver somniferum HOM05D004839 ORTHO05D006012 2.1e-33 147.9 352 34.1
PSO017G5800 Papaver somniferum HOM05D004839 ORTHO05D006012 2.7e-33 147.5 352 34.9
Aqoxy3G03618 Aquilegia oxysepala HOM05D004839 ORTHO05D006012 3.5e-33 147.1 281 36.3
arahy.Tifrunner.gnm1.ann1.PN7U9Z Arachis hypogaea HOM05D004839 ORTHO05D006012 3.5e-33 147.1 378 32.5
Gohir.A12G181900 Gossypium hirsutum HOM05D004839 ORTHO05D006012 3.5e-33 147.1 406 31.8
Lj1g0002650 Lotus japonicus HOM05D004839 ORTHO05D006012 3.5e-33 147.1 283 36.4
Sed0023482 Sechium edule HOM05D004839 ORTHO05D006012 3.5e-33 147.1 267 37.5
unitig_749.g13436 Utricularia gibba HOM05D004839 ORTHO05D006012 3.5e-33 147.1 242 39.3
AUR62021577 Chenopodium quinoa HOM05D004839 ORTHO05D006012 4.6e-33 146.7 261 37.9
Thecc.03G099900 Theobroma cacao HOM05D004839 ORTHO05D006012 6.0e-33 146.4 280 36.8
Ah.11g047930 Amaranthus hybridus HOM05D004839 ORTHO05D006012 7.8e-33 146.0 261 39.5
arahy.Tifrunner.gnm1.ann1.8FG0EB Arachis hypogaea HOM05D004839 ORTHO05D006012 7.8e-33 146.0 369 32.8
CDE04G3432 Ceratophyllum demersum HOM05D004839 ORTHO05D006012 7.8e-33 146.0 283 36.0
Nitab4.5_0001485g0220 Nicotiana tabacum HOM05D004839 ORTHO05D006012 1.0e-32 145.6 297 35.4
Lalb_Chr07g0184911 Lupinus albus HOM05D004839 ORTHO05D006012 3.0e-32 144.1 281 36.7
Hund02595 Selenicereus undatus HOM05D004839 ORTHO05D006012 3.9e-32 143.7 261 37.5
Manes.14G084900 Manihot esculenta HOM05D004839 ORTHO05D006012 5.1e-32 143.3 280 36.4
HPP92_018601 Vanilla planifolia HOM05D004839 ORTHO05D006012 6.6e-32 142.9 279 34.1
EL10Ac5g11115 Beta vulgaris HOM05D004839 ORTHO05D006012 8.7e-32 142.5 261 37.5
MD06G1201400 Malus domestica HOM05D004839 ORTHO05D006012 8.7e-32 142.5 280 35.4
Potri.012G065600 Populus trichocarpa HOM05D004839 ORTHO05D006012 1.5e-31 141.7 280 36.1
Lsat_1_v5_gn_1_13541 Lactuca sativa HOM05D004839 ORTHO05D006012 1.9e-31 141.4 284 34.5
Manes.06G085750 Manihot esculenta HOM05D004839 ORTHO05D006012 3.3e-31 140.6 279 36.2
Solyc03g115240.4 Solanum lycopersicum HOM05D004839 ORTHO05D006012 5.6e-31 139.8 298 34.2
Sopen03g034280 Solanum pennellii HOM05D004839 ORTHO05D006012 5.6e-31 139.8 298 34.2
Sabra12G0046900 Salix brachista HOM05D004839 ORTHO05D006012 7.3e-31 139.4 347 32.3
FAN08G2012 Fragaria x ananassa HOM05D004839 ORTHO05D006012 9.6e-31 139.0 262 37.8
THA.LOC104818342 Tarenaya hassleriana HOM05D004839 ORTHO05D006012 9.6e-31 139.0 279 34.1
DCAR_023142 Daucus carota HOM05D004839 ORTHO05D006012 1.3e-30 138.7 426 29.6
ECA246G0121 Erigeron canadensis HOM05D004839 ORTHO05D006012 1.6e-30 138.3 275 36.4
ATR0064G044 Amborella trichopoda HOM05D004839 ORTHO05D006012 3.6e-30 137.1 259 37.5
Sed0026784 Sechium edule HOM05D004839 ORTHO05D006012 3.6e-30 137.1 283 35.3
TAR374G0643 Trochodendron aralioides HOM05D004839 ORTHO05D006012 3.6e-30 137.1 283 35.0
FvH4_5g14030 Fragaria vesca HOM05D004839 ORTHO05D006012 4.8e-30 136.7 262 37.4
MD14G1210500 Malus domestica HOM05D004839 ORTHO05D006012 3.1e-29 134.0 282 34.0
FAN13G1538 Fragaria x ananassa HOM05D004839 ORTHO05D006012 1.2e-28 132.1 262 36.6
Lalb_Chr07g0184901 Lupinus albus HOM05D004839 ORTHO05D006012 3.4e-28 130.6 259 35.5
Os12g0579000 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 3.4e-28 130.6 317 32.5
Sc04g0004870 Simmondsia chinensis HOM05D004839 ORTHO05D006012 4.5e-28 130.2 341 31.7
Lsat_1_v5_gn_5_23161 Lactuca sativa HOM05D004839 ORTHO05D006012 1.3e-27 128.6 275 34.2
Zm00001eb298660 Zea mays HOM05D004839 ORTHO05D006012 1.3e-27 128.6 335 31.0
Zm00001eb118140 Zea mays HOM05D004839 ORTHO05D006012 2.9e-27 127.5 335 32.2
MSTRG.22984 Avicennia marina HOM05D004839 ORTHO05D006012 3.8e-27 127.1 338 32.0
AL8G37800 Arabidopsis lyrata HOM05D004839 ORTHO05D006012 1.4e-26 125.2 266 33.8
Carub.0008s2182 Capsella rubella HOM05D004839 ORTHO05D006012 1.4e-26 125.2 287 32.1
Sp2g24400 Schrenkiella parvula HOM05D004839 ORTHO05D006012 1.4e-26 125.2 266 34.2
RcHm_v2.0_Chr7g0182791 Rosa chinensis HOM05D004839 ORTHO05D006012 2.4e-26 124.4 236 36.0
Migut.I00327 Erythranthe guttata HOM05D004839 ORTHO05D006012 3.2e-26 124.0 314 31.5
Os07g0109600 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 3.2e-26 124.0 254 37.4
AT5G61150 Arabidopsis thaliana HOM05D004839 ORTHO05D006012 1.6e-25 121.7 308 31.5
SEGI_03099 Sequoiadendron giganteum HOM05D004839 ORTHO05D006012 3.5e-25 120.6 284 32.0
Thhalv10003808m.g Eutrema salsugineum HOM05D004839 ORTHO05D006012 1.8e-24 118.2 226 35.8
Aa31LG11G2200 Aethionema arabicum HOM05D004839 ORTHO05D006012 2.3e-24 117.9 370 29.2
BolC2t12188H Brassica oleracea HOM05D004839 ORTHO05D006012 5.1e-24 116.7 290 30.7
BraA09t36373Z Brassica rapa HOM05D004839 ORTHO05D006012 6.7e-24 116.3 288 32.3
GSVIVG01007906001 Vitis vinifera HOM05D004839 ORTHO05D006012 6.7e-24 116.3 205 37.1
BcaC04g23462 Brassica carinata HOM05D004839 ORTHO05D006012 1.1e-23 115.5 287 31.4
A02p41460 Brassica napus HOM05D004839 ORTHO05D006012 1.5e-23 115.2 348 29.3
C02p61390 Brassica napus HOM05D004839 ORTHO05D006012 1.9e-23 114.8 290 30.0
C09p08080 Brassica napus HOM05D004839 ORTHO05D006012 3.3e-23 114.0 287 31.0
BolC9t53722H Brassica oleracea HOM05D004839 ORTHO05D006012 3.3e-23 114.0 287 31.0
vmacro16504 Vaccinium macrocarpon HOM05D004839 ORTHO05D006012 4.3e-23 113.6 348 29.0
A09p07230 Brassica napus HOM05D004839 ORTHO05D006012 5.6e-23 113.2 288 31.6
Gohir.D12G082100 Gossypium hirsutum HOM05D004839 ORTHO05D006012 7.4e-23 112.8 276 31.5
CARHR274840 Cardamine hirsuta HOM05D004839 ORTHO05D006012 9.6e-23 112.5 287 32.1
SGA_v2.0_scaffold313G48307 Striga asiatica HOM05D004839 ORTHO05D006012 9.6e-23 112.5 303 30.7
Gohir.D12G082302 Gossypium hirsutum HOM05D004839 ORTHO05D006012 4.8e-22 110.2 276 31.5
Gohir.D13G091100 Gossypium hirsutum HOM05D004839 ORTHO05D006012 1.1e-21 109.0 276 31.2
Gohir.D07G141700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 1.8e-21 108.2 276 31.2
Os03g0756500 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 4.0e-21 107.1 273 31.9
arahy.Tifrunner.gnm1.ann1.YGY8HB Arachis hypogaea HOM05D010000 ORTHO05D006012 1.4e-18 98.6 124 45.2
Pp3c14_2440 Physcomitrium patens HOM05D004839 ORTHO05D006012 2.7e-17 94.4 270 30.0
MBI05_g39010_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 5.1e-16 90.1 230 34.8
SalBow5G1942 Salvia bowleyana HOM05D004839 ORTHO05D006012 6.7e-16 89.7 99 45.5
AagrBONN_evm.TU.Sc2ySwM_228.780 Anthoceros agrestis HOM05D004839 ORTHO05D006012 4.3e-15 87.0 201 31.8
SMO301G0010 Selaginella moellendorffii HOM05D004839 ORTHO05D006012 6.2e-14 83.2 224 31.2
Mapoly0001s0516 Marchantia polymorpha HOM05D004839 ORTHO05D006012 1.8e-13 81.6 277 27.4
Oeu008253.1 Olea europaea HOM05D004839 ORTHO05D006012 6.9e-13 79.7 59 59.3
CBR_g54910 Chara braunii HOM05D004839 ORTHO05D000002 6.5e-11 73.2 240 27.1
Lsat_1_v5_gn_3_57821 Lactuca sativa HOM05D004839 ORTHO05D006012 7.9e-09 66.2 56 51.8
Nn030s41597 Nelumbo nucifera HOM05D004839 ORTHO05D006012 5.1e-08 63.5 102 36.3
Peaxi162Scf00201g00230 Petunia axillaris HOM05D004839 ORTHO05D006012 4.3e-07 60.5 53 49.1
RhsimUnG0229200 Rhododendron simsii HOM05D004839 ORTHO05D006012 4.8e-06 57.0 135 31.9
MCO04G392 Micromonas commoda HOM05D004839 ORTHO05D006012 6.3e-06 56.6 168 30.4


User provided reference genes

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