Gene: Sopen03g034280

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g034280
  • Transcript Identifier Sopen03g034280.2
  • Gene Type Coding gene
  • Location Spenn-ch03 : 69452860-69467738 : negative

Gene Family Information

  • ID HOM05D004839
  • #Genes/#Species 152/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g034280.2

Descriptions

  • Description Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold. | VERNALIZATION INDEPENDENCE 4 (VIP4) | INVOLVED IN: negative regulation of flower development, vernalization response | LOCATED IN: cytosol | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Leo1-like protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006368
IEA
InterProtranscription elongation from RNA polymerase II promoter
GO:0016570
IEA
InterProhistone modification
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT5G61150
GO:0010048
ISO
PLAZA Integrative Orthologyvernalization response AT5G61150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016593
IEA
InterProCdc73/Paf1 complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G61150
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G61150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007149 Leo1-like protein
Mapman id Description
15.3.5.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP4/LEO1