Gene: CsaV3_1G005900
General Information
Structural Information
- Species Cucumis sativus L.
- Gene Identifier CsaV3_1G005900
- Transcript Identifier CsaV3_1G005900.1
- Gene Type Coding gene
- Location chr1 : 3780760-3791714 : positive
Gene Family Information
- ID HOM05D000422
- #Genes/#Species 1214/100
- Phylogenetic origin
- ID ORTHO05D003570
- #Genes/#Species 214/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid CsaV3_1G005900.1
Descriptions
- Description Chaperone clpb, putative
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006368 | IEA | InterPro | transcription elongation from RNA polymerase II promoter | |
| GO:0016570 | IEA | InterPro | histone modification | |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT1G74310 |
| GO:0045727 | ISO | PLAZA Integrative Orthology | positive regulation of translation | AT1G74310 |
| GO:0034605 | ISO | PLAZA Integrative Orthology | cellular response to heat | Os05g0519700 |
| GO:0043335 | ISO | PLAZA Integrative Orthology | protein unfolding | AT1G74310 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G74310 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016593 | IEA | InterPro | Cdc73/Paf1 complex | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G74310 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT1G74310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036628 | Clp, N-terminal domain superfamily |
| IPR007149 | Leo1-like protein |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003959 | ATPase, AAA-type, core |
| IPR001270 | ClpA/B family |
| IPR003593 | AAA+ ATPase domain |
| IPR041546 | ClpA/ClpB, AAA lid domain |
| IPR019489 | Clp ATPase, C-terminal |
| IPR004176 | Clp, repeat (R) domain |
| Mapman id | Description |
|---|---|
| 15.3.5.1.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP4/LEO1 |
| 26.4.2.3 | External stimuli response.temperature.heat response.cytosolic chaperone (Hsp101) |