Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020857.1 Olea europaea HOM05D005639 ORTHO05D290761 2.3e-78 295.8 185 100.0
MSTRG.13266 Avicennia marina HOM05D005639 ORTHO05D007234 4.1e-19 99.0 151 55.0
Oeu030450.1 Olea europaea HOM05D005639 ORTHO05D007234 4.5e-18 95.5 64 90.6
Dinv01990 Davidia involucrata HOM05D005639 ORTHO05D007234 8.0e-15 84.7 150 45.3
DCAR_003859 Daucus carota HOM05D005639 ORTHO05D007234 7.5e-13 78.2 142 42.3
Rhsim13G0120200 Rhododendron simsii HOM05D005639 ORTHO05D007234 1.1e-11 74.3 145 54.5
Dinv03058 Davidia involucrata HOM05D005639 ORTHO05D007234 7.0e-11 71.6 147 48.3
CSS0044875 Camellia sinensis var. sinensis HOM05D005639 ORTHO05D007234 2.0e-10 70.1 149 55.7
Actinidia13477 Actinidia chinensis HOM05D005639 ORTHO05D007234 2.7e-10 69.7 150 46.7
vmacro03396 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 4.5e-10 68.9 147 56.5
vmacro03440 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 4.5e-10 68.9 147 56.5
PGSC0003DMG402021193 Solanum tuberosum HOM05D005639 ORTHO05D007234 7.7e-10 68.2 148 52.7
Atru.chr10.888 Acer truncatum HOM05D005639 ORTHO05D007234 1.7e-09 67.0 132 43.9
Ciclev10014949m.g Citrus clementina HOM05D005639 ORTHO05D007234 2.3e-09 66.6 131 52.7
COL.COLO4_26825 Corchorus olitorius HOM05D005639 ORTHO05D007234 2.9e-09 66.2 156 42.3
Cpa.g.sc19.212 Carica papaya HOM05D005639 ORTHO05D007234 6.5e-09 65.1 152 41.4
SGA_v2.0_scaffold106G30666 Striga asiatica HOM05D005639 ORTHO05D007234 6.5e-09 65.1 63 69.8
Lsat_1_v5_gn_4_3900 Lactuca sativa HOM05D005639 ORTHO05D007234 8.6e-09 64.7 153 35.3
Gohir.A02G094000 Gossypium hirsutum HOM05D005639 ORTHO05D007234 1.1e-08 64.3 159 37.7
Nn5g27628 Nelumbo nucifera HOM05D005639 ORTHO05D007234 1.1e-08 64.3 155 39.4
Gorai.005G118400 Gossypium raimondii HOM05D005639 ORTHO05D007234 3.2e-08 62.8 139 38.8
TWI73G0023 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 3.2e-08 62.8 127 44.9
Prupe.4G089600 Prunus persica HOM05D005639 ORTHO05D007234 5.5e-08 62.0 149 37.6
Gohir.D02G104300 Gossypium hirsutum HOM05D005639 ORTHO05D007234 2.8e-07 59.7 148 37.2
QL03p009300 Quercus lobata HOM05D005639 ORTHO05D007234 3.6e-07 59.3 131 45.0
Sed0017304 Sechium edule HOM05D005639 ORTHO05D007234 3.6e-07 59.3 149 38.3
SalBow7G3138 Salvia bowleyana HOM05D005639 ORTHO05D007234 4.7e-07 58.9 64 65.6
Thecc.06G000900 Theobroma cacao HOM05D005639 ORTHO05D007234 4.7e-07 58.9 132 40.2
MELO3C022131.2 Cucumis melo HOM05D005639 ORTHO05D007234 8.0e-07 58.2 147 34.7
Nitab4.5_0004077g0020 Nicotiana tabacum HOM05D005639 ORTHO05D007234 1.0e-06 57.8 146 48.6
CiPaw.04G138400 Carya illinoinensis HOM05D005639 ORTHO05D007234 1.4e-06 57.4 155 36.1
Hma1.2p1_0333F.1_g128320 Hydrangea macrophylla HOM05D005639 ORTHO05D007234 1.4e-06 57.4 64 56.2
Sabra05G0051400 Salix brachista HOM05D005639 ORTHO05D007234 1.8e-06 57.0 65 50.8
unitig_8.g4887 Utricularia gibba HOM05D005639 ORTHO05D007234 1.8e-06 57.0 148 43.2
arahy.Tifrunner.gnm1.ann1.JS3IU7 Arachis hypogaea HOM05D005639 ORTHO05D007234 2.3e-06 56.6 138 42.8
arahy.Tifrunner.gnm1.ann1.MSHM5J Arachis hypogaea HOM05D005639 ORTHO05D007234 2.3e-06 56.6 138 42.8
FAN11G3706 Fragaria x ananassa HOM05D005639 ORTHO05D007234 2.3e-06 56.6 135 42.2
TWI09G1293 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 2.3e-06 56.6 134 41.0
CsaV3_5G039540 Cucumis sativus L. HOM05D005639 ORTHO05D007234 3.0e-06 56.2 150 36.0
FvH4_3g09990 Fragaria vesca HOM05D005639 ORTHO05D007234 3.0e-06 56.2 135 38.5
Potri.005G061000 Populus trichocarpa HOM05D005639 ORTHO05D007234 4.0e-06 55.8 66 53.0
GSVIVG01021618001 Vitis vinifera HOM05D005639 ORTHO05D007234 4.0e-06 55.8 67 52.2
Cc09_g08220 Coffea canephora HOM05D005639 ORTHO05D007234 6.8e-06 55.1 39 71.8
MD10G1254000 Malus domestica HOM05D005639 ORTHO05D007234 6.8e-06 55.1 156 37.2
Sabra07G0088400 Salix brachista HOM05D005639 ORTHO05D007234 6.8e-06 55.1 69 49.3


User provided reference genes

Program Settings