Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019299.2 Olea europaea HOM05D006724 ORTHO05D008514 1.1e-86 323.2 157 100.0
SGA_v2.0_scaffold34G13794 Striga asiatica HOM05D006724 ORTHO05D008514 5.7e-38 161.4 156 57.1
Nitab4.5_0000246g0080 Nicotiana tabacum HOM05D006724 ORTHO05D008514 9.7e-38 160.6 151 59.6
Sopen07g030980 Solanum pennellii HOM05D006724 ORTHO05D008514 1.7e-37 159.8 152 60.5
PGSC0003DMG400012400 Solanum tuberosum HOM05D006724 ORTHO05D008514 4.8e-37 158.3 151 59.6
CAN.G162.28 Capsicum annuum HOM05D006724 ORTHO05D008514 2.4e-36 156.0 148 58.1
Migut.M00774 Erythranthe guttata HOM05D006724 ORTHO05D008514 4.1e-36 155.2 156 57.7
Solyc07g062750.4 Solanum lycopersicum HOM05D006724 ORTHO05D008514 4.1e-36 155.2 152 57.9
MSTRG.15243 Avicennia marina HOM05D006724 ORTHO05D008514 5.0e-34 148.3 157 56.1
Rhsim04G0022800 Rhododendron simsii HOM05D006724 ORTHO05D008514 5.0e-34 148.3 153 55.6
SalBow8G1625 Salvia bowleyana HOM05D006724 ORTHO05D008514 8.5e-34 147.5 153 54.9
Actinidia18778 Actinidia chinensis HOM05D006724 ORTHO05D008514 3.2e-33 145.6 156 54.5
Hma1.2p1_0416F.1_g148420 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 5.5e-33 144.8 158 51.3
CSS0014927 Camellia sinensis var. sinensis HOM05D006724 ORTHO05D008514 2.7e-32 142.5 157 52.9
Dinv14945 Davidia involucrata HOM05D006724 ORTHO05D008514 1.0e-31 140.6 154 53.9
TAR627G0912 Trochodendron aralioides HOM05D006724 ORTHO05D008514 6.7e-31 137.9 133 54.1
Lj8C153G9 Lonicera japonica HOM05D006724 ORTHO05D008514 1.5e-30 136.7 108 60.2
Hma1.2p1_0416F.1_g148430 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 5.7e-30 134.8 83 69.9
Manes.03G104800 Manihot esculenta HOM05D006724 ORTHO05D008514 1.7e-29 133.3 83 68.7
EL10Ac4g08255 Beta vulgaris HOM05D006724 ORTHO05D008514 2.2e-29 132.9 149 53.0
Cfa020617 Carpinus fangiana HOM05D006724 ORTHO05D008514 2.2e-29 132.9 129 51.9
QL08p023685 Quercus lobata HOM05D006724 ORTHO05D008514 2.2e-29 132.9 86 67.4
unitig_85.g27410 Utricularia gibba HOM05D006724 ORTHO05D008514 3.7e-29 132.1 150 49.3
Ah.04g164500 Amaranthus hybridus HOM05D006724 ORTHO05D008514 4.8e-29 131.7 108 57.4
Potri.011G141300 Populus trichocarpa HOM05D006724 ORTHO05D008514 4.8e-29 131.7 163 47.2
HPP92_003898 Vanilla planifolia HOM05D006724 ORTHO05D008514 6.3e-29 131.3 149 49.7
CANSAT35G1416 Cannabis sativa HOM05D006724 ORTHO05D008514 1.4e-28 130.2 108 55.6
Haze_09388 Corylus avellana HOM05D006724 ORTHO05D008514 1.4e-28 130.2 149 47.0
BraA05t22252Z Brassica rapa HOM05D006724 ORTHO05D008514 2.4e-28 129.4 89 64.0
Psat4g169400 Pisum sativum HOM05D006724 ORTHO05D008514 2.4e-28 129.4 138 50.0
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 3.1e-28 129.0 83 66.3
Lalb_Chr01g0006641 Lupinus albus HOM05D006724 ORTHO05D008514 3.1e-28 129.0 128 49.2
Carub.0003s1479 Capsella rubella HOM05D006724 ORTHO05D008514 4.1e-28 128.6 87 65.5
C05p52090 Brassica napus HOM05D006724 ORTHO05D008514 5.3e-28 128.3 83 67.5
BolC5t33894H Brassica oleracea HOM05D006724 ORTHO05D008514 5.3e-28 128.3 83 67.5
A05p34310 Brassica napus HOM05D006724 ORTHO05D008514 7.0e-28 127.9 110 55.5
Thecc.07G098800 Theobroma cacao HOM05D006724 ORTHO05D008514 7.0e-28 127.9 148 45.3
AT3G15140 Arabidopsis thaliana HOM05D006724 ORTHO05D008514 9.1e-28 127.5 83 65.1
AUR62019487 Chenopodium quinoa HOM05D006724 ORTHO05D008514 9.1e-28 127.5 110 55.5
MD11G1255900 Malus domestica HOM05D006724 ORTHO05D008514 9.1e-28 127.5 152 50.0
Phvul.011G156700 Phaseolus vulgaris HOM05D006724 ORTHO05D008514 1.2e-27 127.1 126 49.2
VMungo1127G0638 Vigna mungo HOM05D006724 ORTHO05D008514 1.2e-27 127.1 151 46.4
Aqoxy4G00685 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 1.6e-27 126.7 82 68.3
BcaB06g29538 Brassica carinata HOM05D006724 ORTHO05D008514 1.6e-27 126.7 89 61.8
CARHR090120 Cardamine hirsuta HOM05D006724 ORTHO05D008514 1.6e-27 126.7 83 66.3
AL3G27530 Arabidopsis lyrata HOM05D006724 ORTHO05D008514 2.0e-27 126.3 83 66.3
arahy.Tifrunner.gnm1.ann1.WDE0T2 Arachis hypogaea HOM05D006724 ORTHO05D008514 2.0e-27 126.3 155 47.1
Prupe.4G173900 Prunus persica HOM05D006724 ORTHO05D008514 2.0e-27 126.3 134 48.5
Sp3g13350 Schrenkiella parvula HOM05D006724 ORTHO05D008514 2.0e-27 126.3 147 45.6
HPP92_003869 Vanilla planifolia HOM05D006724 ORTHO05D008514 2.0e-27 126.3 149 49.0
GSVIVG01014275001 Vitis vinifera HOM05D006724 ORTHO05D008514 2.0e-27 126.3 80 67.5
arahy.Tifrunner.gnm1.ann1.N2BE0G Arachis hypogaea HOM05D006724 ORTHO05D008514 2.7e-27 125.9 158 50.0
HanXRQChr12g0364011 Helianthus annuus HOM05D006724 ORTHO05D008514 2.7e-27 125.9 131 49.6
THA.LOC104818095 Tarenaya hassleriana HOM05D006724 ORTHO05D008514 2.7e-27 125.9 83 66.3
Cc05_g11660 Coffea canephora HOM05D006724 ORTHO05D008514 3.5e-27 125.6 103 57.3
RcHm_v2.0_Chr5g0032321 Rosa chinensis HOM05D006724 ORTHO05D008514 3.5e-27 125.6 153 46.4
Aqoxy4G00591 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 4.5e-27 125.2 82 68.3
FvH4_3g19250 Fragaria vesca HOM05D006724 ORTHO05D008514 4.5e-27 125.2 97 58.8
FAN11G3114 Fragaria x ananassa HOM05D006724 ORTHO05D008514 4.5e-27 125.2 97 58.8
FAN16G1823 Fragaria x ananassa HOM05D006724 ORTHO05D008514 4.5e-27 125.2 108 54.6
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 5.9e-27 124.8 83 66.3
Gohir.D01G047400 Gossypium hirsutum HOM05D006724 ORTHO05D008514 1.0e-26 124.0 158 44.9
CiPaw.11G166800 Carya illinoinensis HOM05D006724 ORTHO05D008514 1.3e-26 123.6 109 56.0
Glyma.06G234800 Glycine max HOM05D006724 ORTHO05D008514 1.3e-26 123.6 156 47.4
Gorai.002G066900 Gossypium raimondii HOM05D006724 ORTHO05D008514 1.3e-26 123.6 156 45.5
Hund22832 Selenicereus undatus HOM05D006724 ORTHO05D008514 2.2e-26 122.9 86 62.8
Duzib213G0893 Durio zibethinus HOM05D006724 ORTHO05D008514 5.0e-26 121.7 154 42.9
FAN21G1177 Fragaria x ananassa HOM05D006724 ORTHO05D008514 5.0e-26 121.7 151 45.0
FAN25G2812 Fragaria x ananassa HOM05D006724 ORTHO05D008514 5.0e-26 121.7 103 56.3
Lj3g0025660 Lotus japonicus HOM05D006724 ORTHO05D008514 1.1e-25 120.6 156 47.4
Eucgr.F01176 Eucalyptus grandis HOM05D006724 ORTHO05D008514 1.5e-25 120.2 83 61.4
Lsat_1_v5_gn_9_98661 Lactuca sativa HOM05D006724 ORTHO05D008514 1.5e-25 120.2 160 47.5
TPR.G28169 Trifolium pratense HOM05D006724 ORTHO05D008514 1.9e-25 119.8 82 63.4
CsaV3_4G033360 Cucumis sativus L. HOM05D006724 ORTHO05D008514 7.2e-25 117.9 148 43.2
Medtr8g061030 Medicago truncatula HOM05D006724 ORTHO05D008514 1.2e-24 117.1 82 63.4
PSO832G3136 Papaver somniferum HOM05D006724 ORTHO05D008514 1.2e-24 117.1 83 61.4
Ciclev10010824m.g Citrus clementina HOM05D006724 ORTHO05D008514 1.6e-24 116.7 83 61.4
PGR083G0421 Punica granatum HOM05D006724 ORTHO05D008514 1.6e-24 116.7 83 63.9
Sc03g0010250 Simmondsia chinensis HOM05D006724 ORTHO05D008514 2.1e-24 116.3 153 47.7
Nitab4.5_0000831g0090 Nicotiana tabacum HOM05D006724 ORTHO05D008514 2.7e-24 115.9 147 52.4
Sabra11G0126900 Salix brachista HOM05D006724 ORTHO05D008514 3.6e-24 115.5 106 52.8
ClCG11G017740 Citrullus lanatus HOM05D006724 ORTHO05D008514 2.3e-23 112.8 147 44.2
MELO3C025618.2 Cucumis melo HOM05D006724 ORTHO05D008514 3.0e-23 112.5 102 52.0
DCAR_017120 Daucus carota HOM05D006724 ORTHO05D008514 3.0e-23 112.5 153 45.8
Os06g0353400 Oryza sativa ssp. japonica HOM05D006724 ORTHO05D008514 6.8e-23 111.3 83 57.8
Sed0012116 Sechium edule HOM05D006724 ORTHO05D008514 1.2e-22 110.5 151 43.7
Peaxi162Scf00069g01835 Petunia axillaris HOM05D006724 ORTHO05D008514 2.6e-22 109.4 68 70.6
Nn1g04264 Nelumbo nucifera HOM05D006724 ORTHO05D008514 9.8e-22 107.5 72 65.3
DCAR_013127 Daucus carota HOM05D006724 ORTHO05D008514 2.2e-21 106.3 93 55.9
vmacro09520 Vaccinium macrocarpon HOM05D006724 ORTHO05D008514 1.2e-19 100.5 71 67.6
unitig_86.g29839 Utricularia gibba HOM05D006724 ORTHO05D008514 2.7e-19 99.4 67 65.7
DCAR_017097 Daucus carota HOM05D006724 ORTHO05D008514 1.0e-18 97.4 82 57.3
CBR_g4826 Chara braunii HOM05D000829 ORTHO05D008514 2.3e-18 96.3 84 53.6
AagrBONN_evm.TU.Sc2ySwM_340.295 Anthoceros agrestis HOM05D006724 ORTHO05D008514 2.9e-18 95.9 82 59.8
SMO367G0863 Selaginella moellendorffii HOM05D006724 ORTHO05D008514 1.9e-17 93.2 85 58.8
Pp3c27_5050 Physcomitrium patens HOM05D006724 ORTHO05D008514 4.2e-17 92.0 82 52.4
arahy.Tifrunner.gnm1.ann1.60K44K Arachis hypogaea HOM05D006724 ORTHO05D008514 1.6e-16 90.1 68 60.3
Mapoly0005s0020 Marchantia polymorpha HOM05D006724 ORTHO05D008514 1.6e-16 90.1 99 50.5
TWI32G0858 Tripterygium wilfordii HOM05D006724 ORTHO05D008514 2.8e-16 89.4 128 44.5
AUR62036149 Chenopodium quinoa HOM05D006724 ORTHO05D008514 4.7e-16 88.6 73 53.4
arahy.Tifrunner.gnm1.ann1.E3N302 Arachis hypogaea HOM05D006724 ORTHO05D008514 1.4e-15 87.0 68 58.8
Ca_07350_v3 Cicer arietinum L. HOM05D006724 ORTHO05D008514 4.4e-14 82.0 67 56.7
Atru.chr2.2388 Acer truncatum HOM05D006724 ORTHO05D008514 7.5e-14 81.3 68 55.9
CDE08G0827 Ceratophyllum demersum HOM05D006724 ORTHO05D008514 9.8e-14 80.9 68 52.9
ECA240G0540 Erigeron canadensis HOM05D006724 ORTHO05D008514 3.7e-13 79.0 71 59.2
Zm00001eb281480 Zea mays HOM05D006724 ORTHO05D008514 7.0e-12 74.7 69 44.9
DCAR_013126 Daucus carota HOM05D006724 ORTHO05D008514 9.2e-12 74.3 68 51.5
Gohir.A01G060932 Gossypium hirsutum HOM05D006724 ORTHO05D008514 1.7e-10 70.1 121 36.4
Gohir.A01G060866 Gossypium hirsutum HOM05D006724 ORTHO05D008514 4.4e-06 55.5 32 78.1


User provided reference genes

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