Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018389.1 Olea europaea HOM05D003333 ORTHO05D003836 5.6e-39 163.7 77 100.0
Oeu018383.3 Olea europaea HOM05D003333 ORTHO05D003836 1.0e-32 142.9 76 89.5
Oeu021319.1 Olea europaea HOM05D003333 ORTHO05D003836 1.2e-28 129.4 76 81.6
MSTRG.6153 Avicennia marina HOM05D003333 ORTHO05D003836 9.3e-26 119.8 76 71.1
Oeu021312.1 Olea europaea HOM05D003333 ORTHO05D003836 2.3e-24 115.2 76 69.7
SGA_v2.0_scaffold265G46094 Striga asiatica HOM05D003333 ORTHO05D003836 2.3e-24 115.2 76 71.1
Dinv43259 Davidia involucrata HOM05D003333 ORTHO05D003836 3.0e-24 114.8 76 68.4
SalBow1G6609 Salvia bowleyana HOM05D003333 ORTHO05D003836 5.1e-24 114.0 74 67.6
Dinv10065 Davidia involucrata HOM05D003333 ORTHO05D003836 8.7e-24 113.2 76 67.1
Migut.J01369 Erythranthe guttata HOM05D003333 ORTHO05D003836 3.3e-23 111.3 76 71.1
Hma1.2p1_0222F.1_g093690 Hydrangea macrophylla HOM05D003333 ORTHO05D003836 1.6e-22 109.0 76 69.7
Ciclev10008985m.g Citrus clementina HOM05D003333 ORTHO05D003836 4.8e-22 107.5 76 63.2
vmacro16794 Vaccinium macrocarpon HOM05D003333 ORTHO05D003836 6.3e-22 107.1 76 65.8
DCAR_019403 Daucus carota HOM05D003333 ORTHO05D003836 8.2e-22 106.7 76 64.5
Nitab4.5_0002320g0010 Nicotiana tabacum HOM05D003333 ORTHO05D003836 8.2e-22 106.7 76 63.2
CiPaw.15G166600 Carya illinoinensis HOM05D003333 ORTHO05D003836 2.4e-21 105.1 76 60.5
Rhsim01G0028000 Rhododendron simsii HOM05D003333 ORTHO05D003836 2.4e-21 105.1 76 65.8
CANSAT11G2442 Cannabis sativa HOM05D003333 ORTHO05D003836 3.1e-21 104.8 76 61.8
Dinv41364 Davidia involucrata HOM05D003333 ORTHO05D003836 4.1e-21 104.4 76 64.5
Thecc.09G028300 Theobroma cacao HOM05D003333 ORTHO05D003836 9.0e-21 103.2 76 60.5
Nitab4.5_0002724g0090 Nicotiana tabacum HOM05D003333 ORTHO05D003836 1.2e-20 102.8 76 60.5
Manes.14G145200 Manihot esculenta HOM05D003333 ORTHO05D003836 1.5e-20 102.4 76 61.8
CSS0000248 Camellia sinensis var. sinensis HOM05D003333 ORTHO05D003836 2.6e-20 101.7 76 64.5
COL.COLO4_18825 Corchorus olitorius HOM05D003333 ORTHO05D003836 3.4e-20 101.3 76 60.5
Actinidia38315 Actinidia chinensis HOM05D003333 ORTHO05D003836 7.6e-20 100.1 77 66.2
Duzib168G0432 Durio zibethinus HOM05D003333 ORTHO05D003836 1.0e-19 99.8 76 59.2
Gohir.A05G052600 Gossypium hirsutum HOM05D003333 ORTHO05D003836 1.0e-19 99.8 76 59.2
Cfa020808 Carpinus fangiana HOM05D003333 ORTHO05D003836 1.3e-19 99.4 76 60.5
Lj9A718T41 Lonicera japonica HOM05D003333 ORTHO05D003836 3.8e-19 97.8 77 61.0
Potri.018G104900 Populus trichocarpa HOM05D003333 ORTHO05D003836 3.8e-19 97.8 76 57.9
MD02G1006200 Malus domestica HOM05D003333 ORTHO05D003836 5.0e-19 97.4 78 62.8
Lsat_1_v5_gn_7_50080 Lactuca sativa HOM05D003333 ORTHO05D003836 6.5e-19 97.1 81 60.5
Prupe.7G264700 Prunus persica HOM05D003333 ORTHO05D003836 8.5e-19 96.7 76 57.9
QL02p093741 Quercus lobata HOM05D003333 ORTHO05D003836 8.5e-19 96.7 76 59.2
Gohir.D05G054300 Gossypium hirsutum HOM05D003333 ORTHO05D003836 1.1e-18 96.3 76 57.9
Gorai.009G056000 Gossypium raimondii HOM05D003333 ORTHO05D003836 1.1e-18 96.3 76 57.9
Atru.chr6.2482 Acer truncatum HOM05D003333 ORTHO05D003836 1.4e-18 95.9 76 53.9
BcaNung02970 Brassica carinata HOM05D003333 ORTHO05D003836 1.4e-18 95.9 76 55.3
Glyma.02G205200 Glycine max HOM05D003333 ORTHO05D003836 1.4e-18 95.9 76 60.5
HanXRQChr09g0244551 Helianthus annuus HOM05D003333 ORTHO05D003836 1.4e-18 95.9 77 61.0
Hund08925 Selenicereus undatus HOM05D003333 ORTHO05D003836 1.4e-18 95.9 76 55.3
Sabra18G0089700 Salix brachista HOM05D003333 ORTHO05D003836 1.9e-18 95.5 76 56.6
arahy.Tifrunner.gnm1.ann1.GH9EZK Arachis hypogaea HOM05D003333 ORTHO05D003836 2.5e-18 95.1 76 57.9
QL02p093703 Quercus lobata HOM05D003333 ORTHO05D003836 2.5e-18 95.1 76 57.9
BcaC09g51858 Brassica carinata HOM05D003333 ORTHO05D003836 3.2e-18 94.7 76 55.3
C01p08250 Brassica napus HOM05D003333 ORTHO05D003836 3.2e-18 94.7 76 55.3
BolC1t00813H Brassica oleracea HOM05D003333 ORTHO05D003836 3.2e-18 94.7 76 55.3
Aa31LG3G13720 Aethionema arabicum HOM05D003333 ORTHO05D003836 5.5e-18 94.0 76 57.9
VMungo1215G1683 Vigna mungo HOM05D003333 ORTHO05D003836 7.2e-18 93.6 76 57.9
Eucgr.L01446 Eucalyptus grandis HOM05D003333 ORTHO05D003836 9.3e-18 93.2 76 55.3
QL02p093681 Quercus lobata HOM05D003333 ORTHO05D003836 9.3e-18 93.2 72 59.7
A01p07610 Brassica napus HOM05D003333 ORTHO05D003836 1.2e-17 92.8 76 53.9
Nn8g39960 Nelumbo nucifera HOM05D003333 ORTHO05D003836 1.6e-17 92.4 76 56.6
Lj4g0011279 Lotus japonicus HOM05D003333 ORTHO05D003836 2.1e-17 92.0 76 57.9
Thhalv10014217m.g Eutrema salsugineum HOM05D003333 ORTHO05D003836 3.6e-17 91.3 76 55.3
Phvul.003G155100 Phaseolus vulgaris HOM05D003333 ORTHO05D003836 3.6e-17 91.3 76 56.6
TAR636G2329 Trochodendron aralioides HOM05D003333 ORTHO05D003836 3.6e-17 91.3 76 57.9
Eucgr.C02501 Eucalyptus grandis HOM05D003333 ORTHO05D003836 4.6e-17 90.9 76 53.9
BraA01t00704Z Brassica rapa HOM05D003333 ORTHO05D003836 7.9e-17 90.1 76 52.6
PSO541G3342 Papaver somniferum HOM05D003333 ORTHO05D003836 1.0e-16 89.7 77 54.5
TWI34G1096 Tripterygium wilfordii HOM05D003333 ORTHO05D003836 1.0e-16 89.7 76 55.3
C03p88610 Brassica napus HOM05D003333 ORTHO05D003836 1.8e-16 89.0 76 52.6
BolC3t21167H Brassica oleracea HOM05D003333 ORTHO05D003836 1.8e-16 89.0 76 52.6
CARHR271670 Cardamine hirsuta HOM05D003333 ORTHO05D003836 1.8e-16 89.0 76 55.3
A08p19150 Brassica napus HOM05D003333 ORTHO05D003836 2.3e-16 88.6 76 51.3
Eucgr.L03182 Eucalyptus grandis HOM05D003333 ORTHO05D003836 2.3e-16 88.6 76 52.6
Sp7g28550 Schrenkiella parvula HOM05D003333 ORTHO05D003836 2.3e-16 88.6 76 52.6
Solyc07g005750.3 Solanum lycopersicum HOM05D003333 ORTHO05D003836 2.3e-16 88.6 82 54.9
Sopen07g001850 Solanum pennellii HOM05D003333 ORTHO05D003836 3.0e-16 88.2 77 57.1
BraA08t33876Z Brassica rapa HOM05D003333 ORTHO05D003836 3.9e-16 87.8 76 51.3
CsaV3_2G007600 Cucumis sativus L. HOM05D003333 ORTHO05D003836 3.9e-16 87.8 77 57.1
PGSC0003DMG400011146 Solanum tuberosum HOM05D003333 ORTHO05D003836 6.7e-16 87.0 79 55.7
Aa31LG2G19850 Aethionema arabicum HOM05D003333 ORTHO05D003836 8.7e-16 86.7 76 51.3
AT5G57900 Arabidopsis thaliana HOM05D003333 ORTHO05D003836 8.7e-16 86.7 76 53.9
Cpa.g.sc46.170 Carica papaya HOM05D003333 ORTHO05D003836 8.7e-16 86.7 59 64.4
Sp7g28530 Schrenkiella parvula HOM05D003333 ORTHO05D003836 8.7e-16 86.7 74 52.7
Aa31LG2G19790 Aethionema arabicum HOM05D003333 ORTHO05D003836 1.1e-15 86.3 76 50.0
BcaB03g12653 Brassica carinata HOM05D003333 ORTHO05D003836 1.1e-15 86.3 76 51.3
A10p15260 Brassica napus HOM05D003333 ORTHO05D003836 1.1e-15 86.3 76 53.9
BraA10t43607Z Brassica rapa HOM05D003333 ORTHO05D003836 1.1e-15 86.3 76 53.9
Carub.0008s1843 Capsella rubella HOM05D003333 ORTHO05D003836 1.1e-15 86.3 76 52.6
Lalb_Chr13g0300781 Lupinus albus HOM05D003333 ORTHO05D003836 1.1e-15 86.3 76 52.6
THA.LOC104803544 Tarenaya hassleriana HOM05D003333 ORTHO05D003836 1.5e-15 85.9 75 53.3
Aa31LG2G19800 Aethionema arabicum HOM05D003333 ORTHO05D003836 1.9e-15 85.5 76 50.0
Aqoxy7G03374 Aquilegia oxysepala HOM05D003333 ORTHO05D003836 1.9e-15 85.5 78 53.8
AL8G33960 Arabidopsis lyrata HOM05D003333 ORTHO05D003836 1.9e-15 85.5 76 52.6
CAN.G160.47 Capsicum annuum HOM05D003333 ORTHO05D003836 1.9e-15 85.5 74 56.8
CARHR238520 Cardamine hirsuta HOM05D003333 ORTHO05D003836 1.9e-15 85.5 76 51.3
THA.LOC104811832 Tarenaya hassleriana HOM05D003333 ORTHO05D003836 1.9e-15 85.5 77 57.1
Aa31LG2G19860 Aethionema arabicum HOM05D003333 ORTHO05D003836 3.3e-15 84.7 76 47.4
MBI15_g18227_MAGBIO Magnolia biondii HOM05D003333 ORTHO05D003836 3.3e-15 84.7 78 52.6
PGR142G2767 Punica granatum HOM05D003333 ORTHO05D003836 4.3e-15 84.3 76 48.7
Ah.14g084600 Amaranthus hybridus HOM05D003333 ORTHO05D003836 5.7e-15 84.0 76 48.7
AT4G30640 Arabidopsis thaliana HOM05D003333 ORTHO05D003836 7.4e-15 83.6 76 51.3
C09p49770 Brassica napus HOM05D003333 ORTHO05D003836 7.4e-15 83.6 76 52.6
BolC9t57828H Brassica oleracea HOM05D003333 ORTHO05D003836 7.4e-15 83.6 76 52.6
MELO3C004126.2 Cucumis melo HOM05D003333 ORTHO05D003836 7.4e-15 83.6 77 54.5
Thhalv10014209m.g Eutrema salsugineum HOM05D003333 ORTHO05D003836 7.4e-15 83.6 76 50.0
Sed0000092 Sechium edule HOM05D003333 ORTHO05D003836 9.7e-15 83.2 77 55.8
Ah.14g084580 Amaranthus hybridus HOM05D003333 ORTHO05D003836 1.3e-14 82.8 76 50.0
Sp6g19570 Schrenkiella parvula HOM05D003333 ORTHO05D003836 1.3e-14 82.8 73 53.4
A03p60200 Brassica napus HOM05D003333 ORTHO05D003836 1.6e-14 82.4 76 51.3
CDE02G3474 Ceratophyllum demersum HOM05D003333 ORTHO05D003836 1.6e-14 82.4 76 50.0
Psat0s3930g0160 Pisum sativum HOM05D003333 ORTHO05D003836 1.6e-14 82.4 76 52.6
BcaNung00575 Brassica carinata HOM05D003333 ORTHO05D003836 2.2e-14 82.0 76 50.0
C07p58100 Brassica napus HOM05D003333 ORTHO05D003836 2.2e-14 82.0 76 50.0
BolC7t46269H Brassica oleracea HOM05D003333 ORTHO05D003836 2.2e-14 82.0 76 50.0
Carub.0007s0992 Capsella rubella HOM05D003333 ORTHO05D003836 2.2e-14 82.0 76 50.0
ClCG02G014400 Citrullus lanatus HOM05D003333 ORTHO05D003836 2.2e-14 82.0 77 54.5
Medtr4g130620 Medicago truncatula HOM05D003333 ORTHO05D003836 3.7e-14 81.3 77 51.9
BcaNung02972 Brassica carinata HOM05D003333 ORTHO05D003836 4.8e-14 80.9 76 50.0
AL7G21500 Arabidopsis lyrata HOM05D003333 ORTHO05D003836 6.3e-14 80.5 76 50.0
BcaNung00573 Brassica carinata HOM05D003333 ORTHO05D003836 6.3e-14 80.5 76 50.0
Carub.0005s1014 Capsella rubella HOM05D003333 ORTHO05D003836 8.2e-14 80.1 76 52.6
Sp7g28520 Schrenkiella parvula HOM05D003333 ORTHO05D003836 8.2e-14 80.1 76 50.0
AL5G22560 Arabidopsis lyrata HOM05D003333 ORTHO05D003836 1.1e-13 79.7 76 50.0
BcaNung00576 Brassica carinata HOM05D003333 ORTHO05D003836 1.1e-13 79.7 77 49.4
BcaNung04560 Brassica carinata HOM05D003333 ORTHO05D003836 1.1e-13 79.7 77 51.9
C07p58070 Brassica napus HOM05D003333 ORTHO05D003836 1.1e-13 79.7 76 48.7
C07p58110 Brassica napus HOM05D003333 ORTHO05D003836 1.1e-13 79.7 77 49.4
BolC7t46266H Brassica oleracea HOM05D003333 ORTHO05D003836 1.1e-13 79.7 76 48.7
BolC7t46270H Brassica oleracea HOM05D003333 ORTHO05D003836 1.1e-13 79.7 77 49.4
Ca_21138_v3 Cicer arietinum L. HOM05D003333 ORTHO05D003836 1.1e-13 79.7 76 52.6
Ca_21143_v3 Cicer arietinum L. HOM05D003333 ORTHO05D003836 1.1e-13 79.7 76 52.6
ECA240G0541 Erigeron canadensis HOM05D003333 ORTHO05D003836 1.4e-13 79.3 65 55.4
Aa31sc1432G10 Aethionema arabicum HOM05D003333 ORTHO05D003836 1.8e-13 79.0 76 50.0
BcaNung04559 Brassica carinata HOM05D003333 ORTHO05D003836 1.8e-13 79.0 76 47.4
A03p60160 Brassica napus HOM05D003333 ORTHO05D003836 2.4e-13 78.6 76 48.7
C01p08260 Brassica napus HOM05D003333 ORTHO05D003836 3.1e-13 78.2 76 48.7
Carub.0005s1013 Capsella rubella HOM05D003333 ORTHO05D003836 4.1e-13 77.8 76 51.3
Aa31LG2G19780 Aethionema arabicum HOM05D003333 ORTHO05D003836 1.2e-12 76.3 76 44.7
BcaC09g51854 Brassica carinata HOM05D003333 ORTHO05D003836 1.2e-12 76.3 76 47.4
A03p60210 Brassica napus HOM05D003333 ORTHO05D003836 1.2e-12 76.3 77 49.4
BolC1t00817H Brassica oleracea HOM05D003333 ORTHO05D003836 1.2e-12 76.3 76 47.4
FvH4_1g00760 Fragaria vesca HOM05D003333 ORTHO05D003836 1.2e-12 76.3 76 50.0
FAN28G1118 Fragaria x ananassa HOM05D003333 ORTHO05D003836 1.2e-12 76.3 76 50.0
FAN23G0545 Fragaria x ananassa HOM05D003333 ORTHO05D003836 1.5e-12 75.9 76 51.3
ATR0019G010 Amborella trichopoda HOM05D003333 ORTHO05D003836 2.0e-12 75.5 76 44.7
FAN26G2607 Fragaria x ananassa HOM05D003333 ORTHO05D003836 2.0e-12 75.5 76 50.0
AUR62025340 Chenopodium quinoa HOM05D003333 ORTHO05D003836 3.4e-12 74.7 77 46.8
AUR62025341 Chenopodium quinoa HOM05D003333 ORTHO05D003836 3.4e-12 74.7 76 44.7
FAN04G1412 Fragaria x ananassa HOM05D003333 ORTHO05D003836 5.9e-12 73.9 76 50.0
FvH4_5g27040 Fragaria vesca HOM05D003333 ORTHO05D003836 1.0e-11 73.2 76 50.0
FAN13G1111 Fragaria x ananassa HOM05D003333 ORTHO05D003836 1.0e-11 73.2 76 50.0
BcaNung04558 Brassica carinata HOM05D003333 ORTHO05D003836 2.9e-11 71.6 76 44.7
Peaxi162Scf00753g00012 Petunia axillaris HOM05D003333 ORTHO05D003836 3.8e-11 71.2 77 49.4
BraA07t27986Z Brassica rapa HOM05D003333 ORTHO05D003836 5.0e-11 70.9 76 47.4
Peaxi162Scf00267g00510 Petunia axillaris HOM05D003333 ORTHO05D003836 5.0e-11 70.9 82 43.9
A07p01860 Brassica napus HOM05D003333 ORTHO05D003836 6.5e-11 70.5 76 47.4
Aa31LG2G19840 Aethionema arabicum HOM05D003333 ORTHO05D003836 8.5e-11 70.1 75 46.7
FAN08G3193 Fragaria x ananassa HOM05D003333 ORTHO05D003836 1.4e-10 69.3 76 48.7
FAN21G3730 Fragaria x ananassa HOM05D003333 ORTHO05D003836 1.4e-10 69.3 76 48.7
FAN26G3012 Fragaria x ananassa HOM05D003333 ORTHO05D003836 1.4e-10 69.3 76 48.7
EL10Ac8g18939 Beta vulgaris HOM05D003333 ORTHO05D003836 2.5e-10 68.6 62 45.2
RcHm_v2.0_Chr2g0085481 Rosa chinensis HOM05D003333 ORTHO05D003836 2.5e-10 68.6 76 46.1
AUR62028342 Chenopodium quinoa HOM05D003333 ORTHO05D003836 3.2e-10 68.2 77 44.2
Sc08g0009270 Simmondsia chinensis HOM05D003333 ORTHO05D003836 3.2e-10 68.2 78 44.9
HPP92_013422 Vanilla planifolia HOM05D003333 ORTHO05D003836 3.2e-10 68.2 80 45.0
FAN16G1551 Fragaria x ananassa HOM05D003333 ORTHO05D003836 5.5e-10 67.4 76 47.4
C07p58120 Brassica napus HOM05D003333 ORTHO05D003836 9.4e-10 66.6 68 48.5
BolC7t46271H Brassica oleracea HOM05D003333 ORTHO05D003836 2.3e-08 62.0 62 50.0
FAN18G2716 Fragaria x ananassa HOM05D003333 ORTHO05D003836 3.9e-08 61.2 70 45.7
SMO118G0396 Selaginella moellendorffii HOM05D003333 ORTHO05D003836 3.9e-08 61.2 75 41.3
CDE04G3371 Ceratophyllum demersum HOM05D003333 ORTHO05D003836 8.8e-08 60.1 68 44.1
BcaC06g36466 Brassica carinata HOM05D003333 ORTHO05D003836 2.0e-07 58.9 79 44.3
AagrBONN_evm.TU.Sc2ySwM_368.1612 Anthoceros agrestis HOM05D003333 ORTHO05D003836 4.4e-07 57.8 74 33.8
AUR62028344 Chenopodium quinoa HOM05D003333 ORTHO05D003836 5.7e-07 57.4 57 42.1
Os08g0269800 Oryza sativa ssp. japonica HOM05D003333 ORTHO05D003836 7.4e-07 57.0 78 38.5
BraA03t15061Z Brassica rapa HOM05D003333 ORTHO05D003836 1.7e-06 55.8 71 43.7
CARHR109380 Cardamine hirsuta HOM05D003333 ORTHO05D003836 3.7e-06 54.7 76 40.8


User provided reference genes

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