Gene: AT4G30640

General Information

Structural Information

Species Arabidopsis thaliana
Gene Identifier AT4G30640
Transcript Identifier AT4G30640.1
Gene Type Coding gene
Location Chr4 : 14952670-14953682 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003333
#Genes/#Species 205/93
Phylogenetic origin

ID ORTHO05D003836
#Genes/#Species 203/93
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid AT4G30640.1
uniprot Q9M096

Descriptions

Description RNI-like superfamily protein

Computational description RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: SKP1 interacting partner 1 (TAIR:AT5G57900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006511	TAS	Gene Ontology	ubiquitin-dependent protein catabolic process	1
GO:0031146	IBA	Gene Ontology	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	2

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	ISM	Gene Ontology	cytoplasm
GO:0019005	IBA	Gene Ontology	SCF ubiquitin ligase complex	2

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006553	Leucine-rich repeat, cysteine-containing subtype
IPR036047	F-box-like domain superfamily
IPR032675	Leucine-rich repeat domain superfamily

Mapman id	Description
19.2.2.8.1.4.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (FBX)