Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017989.1 Olea europaea HOM05D000257 ORTHO05D008466 4.6e-89 331.3 174 100.0
Oeu017990.2 Olea europaea HOM05D000257 ORTHO05D008466 5.1e-72 274.6 144 100.0
MSTRG.13065 Avicennia marina HOM05D000257 ORTHO05D008466 6.5e-59 231.1 144 83.3
Migut.H01692 Erythranthe guttata HOM05D000257 ORTHO05D008466 7.4e-55 217.6 144 79.9
Dinv19452 Davidia involucrata HOM05D001185 ORTHO05D003777 2.2e-54 216.1 144 79.2
Hma1.2p1_0496F.1_g165980 Hydrangea macrophylla HOM05D000257 ORTHO05D008466 2.0e-52 209.5 144 76.4
QL04p076583 Quercus lobata HOM05D000257 ORTHO05D008466 2.6e-52 209.1 144 77.1
GSVIVG01036927001 Vitis vinifera HOM05D000257 ORTHO05D008466 2.6e-52 209.1 144 76.4
Prupe.4G139300 Prunus persica HOM05D000257 ORTHO05D008466 5.9e-52 208.0 143 76.2
Haze_25899 Corylus avellana HOM05D000257 ORTHO05D008466 7.7e-52 207.6 143 76.9
CSS0032673 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D008466 1.7e-51 206.5 144 74.3
CSS0039860 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D008466 3.8e-51 205.3 144 73.6
MD10G1203000 Malus domestica HOM05D000257 ORTHO05D008466 3.8e-51 205.3 143 74.8
CiPaw.01G106000 Carya illinoinensis HOM05D000257 ORTHO05D008466 6.5e-51 204.5 143 76.9
Cfa003101 Carpinus fangiana HOM05D000257 ORTHO05D008466 1.4e-50 203.4 143 76.9
HanXRQChr10g0286641 Helianthus annuus HOM05D000257 ORTHO05D008466 2.5e-50 202.6 144 74.3
SGA_v2.0_scaffold239G44047 Striga asiatica HOM05D000257 ORTHO05D008466 4.2e-50 201.8 145 73.1
Actinidia07356 Actinidia chinensis HOM05D000257 ORTHO05D008466 5.5e-50 201.4 144 74.3
Potri.001G439100 Populus trichocarpa HOM05D000257 ORTHO05D008466 5.5e-50 201.4 142 74.6
DCAR_013735 Daucus carota HOM05D000257 ORTHO05D008466 7.2e-50 201.1 144 72.2
MD05G1220600 Malus domestica HOM05D000257 ORTHO05D008466 7.2e-50 201.1 143 74.1
Atru.chr13.2041 Acer truncatum HOM05D000257 ORTHO05D008466 1.6e-49 199.9 144 74.3
Manes.12G158600 Manihot esculenta HOM05D000257 ORTHO05D008466 2.7e-49 199.1 142 73.9
Sopen09g036150 Solanum pennellii HOM05D000257 ORTHO05D008466 2.7e-49 199.1 144 72.9
CAN.G710.38 Capsicum annuum HOM05D000257 ORTHO05D008466 3.6e-49 198.7 144 72.9
Cc05_g16130 Coffea canephora HOM05D000257 ORTHO05D008466 6.1e-49 198.0 144 72.2
Sabra16G0297000 Salix brachista HOM05D000257 ORTHO05D008466 1.0e-48 197.2 142 74.6
Lsat_1_v5_gn_9_36361 Lactuca sativa HOM05D000257 ORTHO05D008466 2.3e-48 196.1 144 71.5
TWI39G0656 Tripterygium wilfordii HOM05D000257 ORTHO05D008466 2.3e-48 196.1 142 74.6
Aa31LG4G1880 Aethionema arabicum HOM05D000257 ORTHO05D008466 5.2e-48 194.9 143 70.6
vmacro11669 Vaccinium macrocarpon HOM05D000257 ORTHO05D008466 6.7e-48 194.5 144 72.2
CANSAT80G0996 Cannabis sativa HOM05D000257 ORTHO05D008466 8.8e-48 194.1 142 71.8
Rhsim06G0239300 Rhododendron simsii HOM05D000257 ORTHO05D008466 8.8e-48 194.1 144 72.9
THA.LOC104808121 Tarenaya hassleriana HOM05D000257 ORTHO05D008466 1.5e-47 193.4 142 71.8
Ah.04g151690 Amaranthus hybridus HOM05D000257 ORTHO05D008466 2.6e-47 192.6 143 72.0
BcaC08g47475 Brassica carinata HOM05D000257 ORTHO05D008466 3.3e-47 192.2 143 70.6
C06p52990 Brassica napus HOM05D000257 ORTHO05D008466 3.3e-47 192.2 143 70.6
BolC6t40317H Brassica oleracea HOM05D000257 ORTHO05D008466 3.3e-47 192.2 143 70.6
COL.COLO4_07376 Corchorus olitorius HOM05D000257 ORTHO05D008466 3.3e-47 192.2 141 73.0
Nn6g34812 Nelumbo nucifera HOM05D000257 ORTHO05D008466 3.3e-47 192.2 144 72.2
AUR62008771 Chenopodium quinoa HOM05D000257 ORTHO05D008466 4.4e-47 191.8 143 69.2
TAR371G1007 Trochodendron aralioides HOM05D000257 ORTHO05D008466 4.4e-47 191.8 144 72.9
Actinidia12787 Actinidia chinensis HOM05D000257 ORTHO05D008466 5.7e-47 191.4 144 73.6
AUR62025467 Chenopodium quinoa HOM05D000257 ORTHO05D008466 5.7e-47 191.4 143 68.5
Thhalv10019555m.g Eutrema salsugineum HOM05D000257 ORTHO05D008466 7.4e-47 191.0 143 70.6
Carub.0002s2599 Capsella rubella HOM05D000257 ORTHO05D008466 9.7e-47 190.7 144 71.5
A07p44250 Brassica napus HOM05D000257 ORTHO05D008466 1.3e-46 190.3 143 69.9
BcaB02g08667 Brassica carinata HOM05D000257 ORTHO05D008466 2.2e-46 189.5 143 69.9
BcaNung04903 Brassica carinata HOM05D000257 ORTHO05D008466 2.2e-46 189.5 142 70.4
Ciclev10020719m.g Citrus clementina HOM05D000257 ORTHO05D008466 2.2e-46 189.5 142 74.6
Duzib268G0490 Durio zibethinus HOM05D000257 ORTHO05D008466 2.8e-46 189.1 141 70.9
RcHm_v2.0_Chr7g0215141 Rosa chinensis HOM05D000257 ORTHO05D008466 2.8e-46 189.1 143 69.2
unitig_21.g20253 Utricularia gibba HOM05D001622 ORTHO05D008466 2.8e-46 189.1 144 68.8
BraA07t31933Z Brassica rapa HOM05D000257 ORTHO05D008466 3.7e-46 188.7 143 69.2
SalBow4G0170 Salvia bowleyana HOM05D000257 ORTHO05D008466 4.8e-46 188.3 123 80.5
CARHR072780 Cardamine hirsuta HOM05D000257 ORTHO05D008466 6.3e-46 188.0 144 70.1
Cpa.g.sc5.79 Carica papaya HOM05D000257 ORTHO05D008466 6.3e-46 188.0 142 71.8
AT1G79120 Arabidopsis thaliana HOM05D000257 ORTHO05D008466 1.4e-45 186.8 144 70.8
Gorai.009G355600 Gossypium raimondii HOM05D000257 ORTHO05D008466 1.4e-45 186.8 141 70.9
AL2G39590 Arabidopsis lyrata HOM05D000257 ORTHO05D008466 1.8e-45 186.4 144 70.8
Thecc.07G150800 Theobroma cacao HOM05D000257 ORTHO05D008466 1.8e-45 186.4 141 70.2
PGR102G0749 Punica granatum HOM05D000257 ORTHO05D008466 5.3e-45 184.9 142 69.7
Gohir.A05G267000 Gossypium hirsutum HOM05D000257 ORTHO05D008466 7.0e-45 184.5 141 70.2
Gohir.D05G268600 Gossypium hirsutum HOM05D000257 ORTHO05D008466 7.0e-45 184.5 141 70.2
Gorai.009G281200 Gossypium raimondii HOM05D000257 ORTHO05D008466 7.0e-45 184.5 141 70.2
Sp5g34170 Schrenkiella parvula HOM05D000257 ORTHO05D008466 9.1e-45 184.1 144 68.8
Gohir.A04G048300 Gossypium hirsutum HOM05D000257 ORTHO05D008466 1.6e-44 183.3 141 68.8
Sc06g0001930 Simmondsia chinensis HOM05D000257 ORTHO05D008466 1.6e-44 183.3 142 71.1
FvH4_5g24801 Fragaria vesca HOM05D000257 ORTHO05D008466 2.0e-44 183.0 143 67.8
Gohir.D05G331700 Gossypium hirsutum HOM05D000257 ORTHO05D008466 2.6e-44 182.6 141 69.5
CsaV3_1G014890 Cucumis sativus L. HOM05D000257 ORTHO05D008466 5.9e-44 181.4 143 69.2
arahy.Tifrunner.gnm1.ann1.D3MK98 Arachis hypogaea HOM05D000257 ORTHO05D008466 7.7e-44 181.0 142 66.2
arahy.Tifrunner.gnm1.ann1.QG7W63 Arachis hypogaea HOM05D000257 ORTHO05D008466 7.7e-44 181.0 142 66.2
MELO3C004699.2 Cucumis melo HOM05D000257 ORTHO05D008466 7.7e-44 181.0 143 69.2
Sed0013017 Sechium edule HOM05D000257 ORTHO05D008466 2.2e-43 179.5 143 67.8
arahy.Tifrunner.gnm1.ann1.07WNF7 Arachis hypogaea HOM05D000257 ORTHO05D008466 6.5e-43 177.9 142 65.5
FAN08G3394 Fragaria x ananassa HOM05D000257 ORTHO05D008466 6.5e-43 177.9 143 67.1
Aqoxy6G02086 Aquilegia oxysepala HOM05D000257 ORTHO05D008466 1.9e-42 176.4 142 66.9
CSS0046879 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D008466 7.2e-42 174.5 144 65.3
Lj3g0008054 Lotus japonicus HOM05D000257 ORTHO05D008466 7.2e-42 174.5 144 63.2
CSS0048850 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D008466 2.1e-41 172.9 144 64.6
TPR.G28748 Trifolium pratense HOM05D000257 ORTHO05D008466 3.6e-41 172.2 143 62.9
Psat4g138080 Pisum sativum HOM05D000257 ORTHO05D008466 4.7e-41 171.8 143 62.9
Ca_12990_v3 Cicer arietinum L. HOM05D000257 ORTHO05D008466 2.3e-40 169.5 143 63.6
Zm00001eb052230 Zea mays HOM05D000257 ORTHO05D008466 2.3e-40 169.5 138 60.9
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 4.0e-40 168.7 142 63.4
Lalb_Chr03g0031781 Lupinus albus HOM05D000257 ORTHO05D008466 5.2e-40 168.3 144 62.5
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 5.2e-40 168.3 120 75.0
Glyma.07G037800 Glycine max HOM05D000257 ORTHO05D008466 1.2e-39 167.2 142 62.0
Eucgr.A00499 Eucalyptus grandis HOM05D000257 ORTHO05D008466 2.6e-39 166.0 120 74.2
Zm00001eb243720 Zea mays HOM05D000257 ORTHO05D008466 3.3e-39 165.6 138 60.9
Zm00001eb420460 Zea mays HOM05D000257 ORTHO05D008466 3.3e-39 165.6 138 60.1
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 7.5e-39 164.5 117 75.2
HPP92_012281 Vanilla planifolia HOM05D000257 ORTHO05D008466 9.7e-39 164.1 168 53.6
PSO675G1115 Papaver somniferum HOM05D000257 ORTHO05D008466 1.7e-38 163.3 147 61.2
HPP92_012291 Vanilla planifolia HOM05D000257 ORTHO05D008466 2.8e-38 162.5 162 54.3
Os03g0668400 Oryza sativa ssp. japonica HOM05D000257 ORTHO05D008466 3.7e-38 162.2 143 56.6
VMungo0647G1219 Vigna mungo HOM05D000257 ORTHO05D008466 3.7e-38 162.2 144 58.3
Lj8P188T30 Lonicera japonica HOM05D000257 ORTHO05D008466 4.8e-38 161.8 120 70.8
PSO541G4726 Papaver somniferum HOM05D000257 ORTHO05D008466 4.8e-38 161.8 147 59.9
Phvul.011G174500 Phaseolus vulgaris HOM05D000257 ORTHO05D008466 1.8e-37 159.8 144 59.0
VMungo1127G0553 Vigna mungo HOM05D000257 ORTHO05D008466 2.4e-37 159.5 144 58.3
ATR0763G098 Amborella trichopoda HOM05D000257 ORTHO05D008466 9.1e-37 157.5 143 60.1
CiPaw.01G106100 Carya illinoinensis HOM05D000257 ORTHO05D008466 9.1e-37 157.5 145 64.8
Zm00001eb217570 Zea mays HOM05D000257 ORTHO05D008466 1.6e-36 156.8 138 57.2
FAN18G1363 Fragaria x ananassa HOM05D000257 ORTHO05D008466 2.9e-35 152.5 120 69.2
FAN13G2657 Fragaria x ananassa HOM05D000257 ORTHO05D008466 1.9e-34 149.8 120 68.3
FAN04G0239 Fragaria x ananassa HOM05D026893 ORTHO05D008466 7.2e-34 147.9 120 68.3
SEGI_09512 Sequoiadendron giganteum HOM05D000257 ORTHO05D008466 9.4e-34 147.5 140 56.4
BcaNung04900 Brassica carinata HOM05D000257 ORTHO05D008466 1.5e-31 140.2 104 70.2
BcaNung04904 Brassica carinata HOM05D000257 ORTHO05D008466 1.8e-29 133.3 99 69.7
BcaNung04906 Brassica carinata HOM05D000257 ORTHO05D008466 3.8e-27 125.6 146 52.1
CDE06G1888 Ceratophyllum demersum HOM05D000257 ORTHO05D008466 3.8e-27 125.6 103 68.9
Lsat_1_v5_gn_2_106780 Lactuca sativa HOM05D000257 ORTHO05D008466 2.3e-24 116.3 72 77.8
VMungo1127G1619 Vigna mungo HOM05D000257 ORTHO05D008466 3.8e-19 99.0 95 60.0
MBI18_g11474_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D008466 1.7e-11 73.6 78 52.6
Migut.B01850 Erythranthe guttata HOM05D000257 ORTHO05D003333 6.2e-09 65.1 129 31.8
MD00G1016400 Malus domestica HOM05D000257 ORTHO05D003333 1.8e-08 63.5 126 32.5
MD09G1291100 Malus domestica HOM05D000257 ORTHO05D003333 1.8e-08 63.5 126 31.7
Prupe.3G002000 Prunus persica HOM05D000257 ORTHO05D003333 4.0e-08 62.4 126 31.0
Potri.002G169300 Populus trichocarpa HOM05D000257 ORTHO05D003333 5.2e-08 62.0 133 29.3
CANSAT56G0310 Cannabis sativa HOM05D000257 ORTHO05D003333 6.8e-08 61.6 140 32.1
CANSAT56G0729 Cannabis sativa HOM05D000257 ORTHO05D003333 6.8e-08 61.6 140 32.1
Cc02_g39170 Coffea canephora HOM05D000257 ORTHO05D003333 6.8e-08 61.6 127 31.5
FvH4_3g25450 Fragaria vesca HOM05D000257 ORTHO05D003333 8.9e-08 61.2 126 31.0
FAN11G0498 Fragaria x ananassa HOM05D000257 ORTHO05D003333 8.9e-08 61.2 126 31.0
FAN16G0491 Fragaria x ananassa HOM05D000257 ORTHO05D003333 8.9e-08 61.2 126 31.0
FAN25G3475 Fragaria x ananassa HOM05D000257 ORTHO05D003333 8.9e-08 61.2 126 31.0
Oeu008690.3 Olea europaea HOM05D000257 ORTHO05D003333 2.0e-07 60.1 127 31.5
SalBow3G3470 Salvia bowleyana HOM05D000257 ORTHO05D003333 2.0e-07 60.1 126 30.2
TAR636G2230 Trochodendron aralioides HOM05D000257 ORTHO05D003333 2.0e-07 60.1 146 30.1
QL10p055966 Quercus lobata HOM05D000257 ORTHO05D003333 2.6e-07 59.7 149 30.9
SEGI_39878 Sequoiadendron giganteum HOM05D000257 ORTHO05D003333 3.4e-07 59.3 127 32.3
Cpa.g.sc273.8 Carica papaya HOM05D000257 ORTHO05D003333 4.4e-07 58.9 126 31.7
Sabra02G0142900 Salix brachista HOM05D000257 ORTHO05D003333 4.4e-07 58.9 133 28.6
GSVIVG01027077001 Vitis vinifera HOM05D000001 ORTHO05D000003 4.4e-07 58.9 126 31.0
CDE02G1867 Ceratophyllum demersum HOM05D000257 ORTHO05D003333 5.8e-07 58.5 126 29.4
PSO384G4359 Papaver somniferum HOM05D000257 ORTHO05D003333 7.5e-07 58.2 126 31.0
MBI07_g34226_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D003333 9.8e-07 57.8 146 29.5
MBI07_g45741_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D003333 9.8e-07 57.8 146 29.5
PGR042G0978 Punica granatum HOM05D000257 ORTHO05D003333 9.8e-07 57.8 126 31.0
Aqoxy7G00136 Aquilegia oxysepala HOM05D000257 ORTHO05D003333 1.3e-06 57.4 140 27.9
Lsat_1_v5_gn_3_139581 Lactuca sativa HOM05D000257 ORTHO05D003333 1.3e-06 57.4 140 30.7
Peaxi162Scf00786g00442 Petunia axillaris HOM05D000257 ORTHO05D003333 1.3e-06 57.4 126 29.4
RcHm_v2.0_Chr5g0046651 Rosa chinensis HOM05D000257 ORTHO05D003333 1.3e-06 57.4 125 29.6
CAN.G986.27 Capsicum annuum HOM05D000257 ORTHO05D003333 1.7e-06 57.0 131 30.5
Dinv32569 Davidia involucrata HOM05D000257 ORTHO05D003333 1.7e-06 57.0 126 29.4
Atru.chr5.645 Acer truncatum HOM05D000257 ORTHO05D003333 2.2e-06 56.6 141 31.2
MSTRG.17332 Avicennia marina HOM05D000257 ORTHO05D003333 2.2e-06 56.6 126 29.4
Manes.01G247400 Manihot esculenta HOM05D000257 ORTHO05D003333 2.2e-06 56.6 149 28.2
Nn3g19054 Nelumbo nucifera HOM05D000257 ORTHO05D003333 2.2e-06 56.6 146 28.1
Aa31LG5G930 Aethionema arabicum HOM05D000257 ORTHO05D000003 2.9e-06 56.2 126 29.4
SGA_v2.0_scaffold5G03008 Striga asiatica HOM05D000257 ORTHO05D003333 2.9e-06 56.2 126 31.0
unitig_736.g22814 Utricularia gibba HOM05D000257 ORTHO05D003333 2.9e-06 56.2 126 28.6
ATR0602G276 Amborella trichopoda HOM05D000257 ORTHO05D003333 3.7e-06 55.8 147 27.9
BcaB01g02308 Brassica carinata HOM05D000257 ORTHO05D003333 3.7e-06 55.8 148 27.7
A09p00250 Brassica napus HOM05D000257 ORTHO05D003333 4.9e-06 55.5 141 29.1
BraA09t35752Z Brassica rapa HOM05D000257 ORTHO05D003333 4.9e-06 55.5 141 29.1
Ciclev10023767m.g Citrus clementina HOM05D000257 ORTHO05D000003 4.9e-06 55.5 126 28.6
Thhalv10028368m.g Eutrema salsugineum HOM05D000257 ORTHO05D000003 4.9e-06 55.5 141 28.4
Lj9P595T36 Lonicera japonica HOM05D000257 ORTHO05D003333 4.9e-06 55.5 140 31.4
Potri.014G096800 Populus trichocarpa HOM05D000257 ORTHO05D003333 4.9e-06 55.5 133 27.1
BcaC04g24116 Brassica carinata HOM05D000257 ORTHO05D003333 6.4e-06 55.1 141 29.1
C09p00880 Brassica napus HOM05D000257 ORTHO05D003333 6.4e-06 55.1 141 29.1
BolC9t53022H Brassica oleracea HOM05D000257 ORTHO05D003333 6.4e-06 55.1 141 29.1
PSO135G0431 Papaver somniferum HOM05D000257 ORTHO05D003333 6.4e-06 55.1 126 30.2
Rhsim07G0005600 Rhododendron simsii HOM05D000257 ORTHO05D003333 6.4e-06 55.1 126 29.4
Sopen01g039420 Solanum pennellii HOM05D000257 ORTHO05D007882 6.4e-06 55.1 131 30.5
CiPaw.02G039500 Carya illinoinensis HOM05D000257 ORTHO05D003333 8.3e-06 54.7 128 30.5
Sabra14G0070900 Salix brachista HOM05D000257 ORTHO05D003333 8.3e-06 54.7 133 27.1


User provided reference genes

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