Gene: SGA_v2.0_scaffold5G03008

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold5G03008
  • Transcript Identifier SGA_v2.0_scaffold5T03008
  • Gene Type Coding gene
  • Location scaffold5 : 3347103-3348656 : positive

Gene Family Information

  • ID HOM05D000257
  • #Genes/#Species 1674/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Ubiquitin carboxyl-terminal hydrolase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
IEA
InterProGroup II intron splicing
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing Zm00001eb344150
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT4G01037

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb344150
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G01037

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast Zm00001eb344150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021099 Plant organelle RNA recognition domain
IPR040293 Protein WHAT'S THIS FACTOR 1-like
IPR045040 PORR family
Mapman id Description
16.11.4.1.1.4 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.basal splicing factor (WTF1)